Caloenas nicobarica (Nicobar pigeon): 135985108
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Entry
135985108 CDS
T11056
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnic01009
]
135985108 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135985108 (CTDP1)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
135985108 (CTDP1)
Protein phosphatases and associated proteins [BR:
cnic01009
]
HAD phosphatases
Fcp/Scp phosphatases
135985108 (CTDP1)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135985108 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
LIG3_BRCT
BSH_CusB
Motif
Other DBs
NCBI-GeneID:
135985108
NCBI-ProteinID:
XP_065484141
LinkDB
All DBs
Position
2:66583234..66693031
Genome browser
AA seq
997 aa
AA seq
DB search
MEGPAERGGGPGGEGPAGTITEIRAPGPRPLRLLEWKVSVGAAVQIGSVLALCAPVPPAP
RPAAGPTTPPPAASGASTRPQRAGPERKLKAERPGVVRELCARPGQVIAPGGVLVRLEGC
SHPVVMKGLCAECGQDLTQIQSKNGKQNVPLSTATVSMVHSVPELKVSSEQAEQLGREDQ
QRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLE
KIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCG
DSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREIQMKKKVNHSTKPEALD
SAVTSAKDAEEIKNVTCVEEQSNGLKAGKDTCTANGSTSVSSETSDWDMNSRDKVNAQDS
LNDSTDQKMDSDVSNDLTNTKESQIFSEQVDRTVIEKQETQGKTTNDLDFELSSDSESDG
GLDTRKSSPSVSDSENEEKRSWKKSKQPLEDESLHKGSCTDGIEKKDGLVNHSGETQSLP
TENVSEKTDLEAQEESEQESLCDSGNGCADKKEAETESQISEQSGITMGESLDQSMEEEE
EEDDTDDDDHLIYLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVTI
IFSGLYPTNFPIEKTREHYHATALGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQAQD
CKDLHVVNPDWLWSCLERWDKVEEQLFPLKDDYIKTHRENSPAMFPDTHSTFQTALFHPT
PIHPKSQPAPEVRLYDPNTGKLIRKGAQTSGQLMYIQSPAPPITLPVHGEHSSFRVVQPH
QQQMFEEDNLPASENEEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSD
ESDSEKKKPEEKGEKAQMTATETLGMKTDQRPGSSSSSSSSERSLTGSVPRGHKRKLDED
DAASESSKESSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggaggggccggcagagaggggtggcgggcccggcggggaaggcccggcggggacgatc
acggagattcgggcgccgggcccgcgcccgctgcggctgctggagtggaaggtgtcggtg
ggggcggcggtgcagatcgggtcggtgctggcgctgtgcgccccggtgccgcccgccccg
cgcccggccgccggccccaccaccccgccgcccgccgccagcggcgccagcacccggccg
cagcgggccggcccggagcgcaagctgaaagcggagcggcccggcgtggtgcgggagctg
tgtgcgcggcccggacaggtcatcgcgcccgggggtgtcttggtgagactggagggatgc
agccatcctgttgttatgaaaggcttgtgtgcagaatgtggccaggacttaactcagata
caaagcaagaatggaaagcagaatgtgccattatccacagcaactgtgtctatggttcac
agtgtcccagaactgaaagttagctctgagcaagctgagcagttaggaagagaagatcaa
cagcgactacatcgaaatcgaaaactggtgctcatggtagatttggaccagacattgatc
catactacagaacagcactgccaacaaatgtccaataagggaatatttcatttccagtta
ggtcgaggtgagcctatgttgcatactcgtttgcgtcctcattgtaaagaattcctggaa
aaaattgccaagctgtacgaattacacgtttttacttttggcagcaggctgtatgcacat
acaattgcaggatttttggaccctgaaaagaagcttttttcccatcggatattgtcaagg
gatgaatgtatcgatccattttctaaaactgggaatcttagagatctcttcccgtgtggg
gattccatggtttgcatcattgatgacagagaggatgtttggaagtttgcacccaattta
ataactgtgaagaaatatgtatactttcaggggataggagatattaatgcacctcctgga
tcaagagaaattcaaatgaagaagaaagtaaaccactctacaaaaccagaggcactggat
tcagcagtgacatcagcaaaagatgctgaagaaataaagaatgttacatgtgtagaagaa
caaagcaatggtctcaaagctggaaaggacacttgcactgcaaatggaagtacttctgta
agcagtgaaacatctgactgggatatgaactctcgtgataaagttaatgcccaggactcc
ttaaatgatagcactgatcagaaaatggacagtgacgtcagtaatgatttgacaaataca
aaagaatctcagattttttcagaacaagttgatagaacagtaatagagaagcaggaaacc
caaggcaagacaacaaatgacttggactttgagctgtctagtgacagtgaaagtgacggt
ggattggataccagaaagtcatccccttctgtatcagatagtgagaacgaggaaaagaga
agctggaagaaatccaaacagcctctggaggatgaaagcttgcataaagggagttgcact
gatgggattgagaaaaaagatggtctggtgaaccattctggggagacacaatctctacct
actgaaaatgttagtgagaaaactgatcttgaagcacaagaagaaagtgaacaggaaagc
ctttgtgattcagggaatggatgtgcagacaagaaggaagctgaaacagagtctcagatt
agtgaacagtctggaattacaatgggtgagtccttagaccagagtatggaggaagaagag
gaggaagatgatacagatgatgatgaccatttaatatatctcgaagagatccttgtgcga
gttcacactgattattatacaaagtatgataaatacctgaaaaaagagattgaggaaatt
ccagacatcagaaaaatagtgccagaactgaaaagtaaagtgttggcagatgtaaccata
atatttagtggactctatccaacaaacttccctattgagaaaacacgggaacactatcat
gccacagcacttggagctaaaattgtgaagaatctggtactgagtgctgatgatcctgac
aaggcaacgcatctcattgcagcaaggacaggcacagaaaaagtccggcaagctcaggac
tgcaaggacctccatgttgtgaaccctgactggctgtggagctgcctagagcggtgggac
aaggttgaggagcagctctttcccttgaaggatgactacatcaaaacacacagagagaat
agccctgccatgtttcctgacacacacagcacatttcagacagctctgtttcacccaacg
ccaatccatccaaagtctcaacctgctcctgaagttcgactttatgatcccaacactggg
aagctgatcaggaagggtgctcagacctctggccagttgatgtacatccagtctccagct
cctcccatcaccttaccagtccatggagaacactcatccttcagagttgttcaaccacat
cagcagcagatgtttgaagaagacaacctaccagcaagtgaaaatgaagagcagcctggt
ccatctaagcggaaacggcagccaagtatgtctgagacaatgcccctgtacaccctatgt
aaagaggatttagagagtatggataaagaggtggatgacatcttaggagaaggaagcgat
gaaagtgatagtgaaaaaaaaaagccagaagagaaaggtgagaaagctcagatgactgca
acagagactctaggaatgaagacagaccagagacctggatcgtcgtcgtcatcatcatca
agtgaaagaagcttaacaggcagtgtacccaggggtcataagcgcaaactggatgaagat
gatgctgccagtgaatccagtaaagaatctagcaatgaagatgaggaaggaagcagttct
gaagcagatgaaatggcagcagcacttgaagctgaattgaatgacttcatgtga
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