Caloenas nicobarica (Nicobar pigeon): 135985136
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Entry
135985136 CDS
T11056
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135985136 (LIMD1)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135985136 (LIMD1)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135985136 (LIMD1)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
135985136 (LIMD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
135985136
NCBI-ProteinID:
XP_065484207
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Position
2:complement(47536023..47570499)
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AA seq
590 aa
AA seq
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MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKAAGNNPEFEETRRVFATKMAKIHLQQQ
QQQQEEMLMAALNGGATFSAPRPIPSMARGAKPPPGSAAEGPRARPYDGGERGVGESGAR
AEAPGNQTGRWGWEAEPDRIPKVGGSQPSAGRGEQHAGSPGDPQPCRSRQENGSEGRRGG
GDQRSSSFSHAWSPPTPSVGMEKGAPGALLQQRSSSFSASSVQPTRGYSGPADPCGPRAG
GDSSQLWYQGVPLSFPSSSAPATPSVDYQHATTHPGPAGHFVAHGQNHQPNGSGTDPEPS
SSRLALRGPIAPDAPQPPFPEGTSSPRPDTRHPEGSSTAKVKLPCQTLLPQPEQGPSAAE
LKLEALTQRLEQEMDARPKADYFGTCVKCSKGVYGANQACQAMGNLYHDGCFTCGACSRK
LRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFICGHLIMDMILQALGKSYHPGCFRCVVC
NECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDYHVE
CYHCEDCGMELNDEDGHRCYPLDEHLLCHSCHLKHIENGTTPAAVYQHHY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggataagtacgacgacctgggtttggaagccagcaagttcatcgaagacctcaacatg
tacgaggcctccaaggacggtctctttcgggtggacaaagctgccggcaacaaccccgag
ttcgaggagaccaggcgggtcttcgccaccaaaatggccaagatccacctccagcagcag
cagcagcagcaggaggagatgctgatggccgccttgaatggaggagccaccttcagtgcc
ccccggcccatcccatcgatggcccggggtgccaaaccacccccgggctccgccgccgag
gggccacgtgcgaggccgtatgatggaggggagcgcggcgtcggcgagagcggggcacgt
gccgaggccccagggaaccagactgggcgctggggctgggaagcggagcccgacaggatc
cccaaagtggggggctcgcagcccagtgcggggcgaggggagcagcatgccgggagcccc
ggtgacccccagccctgccgcagcaggcaggagaacggcagcgagggcaggcggggtggt
ggggaccagagatcctcctccttctcgcacgcctggagccccccaacaccttcagtgggg
atggagaagggggcaccgggggccctgctgcagcagaggtcatcttccttctcggcctcc
tctgtgcagcccacccgggggtattcgggccctgctgacccctgcggtcccagggccgga
ggggacagcagccagctgtggtaccagggcgtcccgctgtccttcccctccagctccgca
cctgccaccccgagtgtggactaccagcatgccaccacccacccaggcccagctggccac
ttcgtggcccacggtcaaaaccaccagcccaatggcagcggcacagatcccgagccgagc
tcctcgcgcctggccttgcgtgggccgatagctccagatgctccacagccacctttccca
gagggcaccagcagcccgcggccggacaccaggcacccggagggctccagcacggcgaag
gtgaagctgccctgccagaccctccttccacagccagagcaagggccgtcggcagccgag
ctgaagctggaggcactgacccagcgcctggagcaggagatggatgctcggccgaaggcc
gattacttcggcacctgcgtgaagtgcagcaagggggtgtatggagcaaaccaggcttgc
caggccatgggcaacctctaccacgatggctgcttcacctgcggagcctgcagtcgaaag
ctgagaggaaaagccttttattttgtcaatggcaaggtgttctgcgaagaagatttcctg
tattctggtttccagcagtcagctgacaggtgtttcatttgtggtcatttgataatggac
atgatcctgcaggctctagggaaatcatatcatccaggctgcttccgatgcgtggtctgc
aacgagtgtctggatggtgtgccgttcactgtagactctgaaaacaaaatctactgtgtc
agagattaccacaaagttttagctccaaagtgtgcagcatgtggacttcccattctgccc
tccgaggggtctgatgagaccattcgggttgtgtccatggacaaggattaccacgtggaa
tgttatcactgcgaggactgcgggatggagctgaacgacgaagacgggcatcgctgttac
ccgctagatgaacatttgctttgtcactcctgtcatctgaaacacatagagaacggcaca
accccagcagctgtctaccagcaccactactag
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