Caloenas nicobarica (Nicobar pigeon): 135985170
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Entry
135985170 CDS
T11056
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135985170 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnic01009
]
135985170 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135985170 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135985170 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cnic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135985170 (RB1CC1)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135985170 (RB1CC1)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135985170 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
135985170
NCBI-ProteinID:
XP_065484281
LinkDB
All DBs
Position
2:complement(123398935..123482967)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDEIKLKLTHLGSAVSVMAKIPLLECLTRHSYRECLGRLDSSAEHGGAESEETEDGKSA
ELVLSSGISKMNSKSMLASFCKSVEHSALEGTDSENVKDDKESGQVAAVQDNETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSFDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTVTTIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTNTCVKNVSVENASLSVCMEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNAIEKVKLTLEKTLKDKHQKELQSLKSEYETKINKLLEDGEENQKKIKKL
KGDLLGLEEVLQNKNDEFAMVKNEKEAVVCLQNEKDQKLLELECQMETRNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELENNLQARHLQEFEKVLAEHKDCLD
KLKKENQHTLEQMQEAHTVVVQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQLQETLKSQIDKETESLKKEIDKLNNKIRINSDEYQMGLSELRILMTTEKDQ
CISELVDRYEEETNLLRTELNKVTLLHQKTSETEKRLSEQITELQSKLELEANALEKEKM
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTAYKEFELQR
EAAEKGLLEKIQQLEIQVNRSPPTESSAESSLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVVKLRSSNFSPSTYSAAASEACGACAADIPTDTDRLVSDIAAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatacgtatttctggtcaacactggaactacccttacctttgacacagaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgccgtgtttcatacggtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaaactttgctccttttgtgaaggtctcgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acctactcttaccaaaagctgcttttcaagtttgaaaatgtatattcaagctatttgcag
tccatagatgaaatcaagttgaaacttacacacttgggttctgctgtttctgtcatggcg
aagataccactgctggagtgcctaacaagacatagttacagagagtgcttaggaagactg
gattcttcagctgagcatggaggggcagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttcttctggtatatctaaaatgaacagtaaatcaatgttagcctcattt
tgcaaatcagttgaacattcagctttggaaggcacagattcggaaaatgtaaaagatgat
aaggaatctggtcaagttgctgctgtccaggacaatgaaacatcagtagaactgaaagat
gatgatcagccttccttcaatgtgtctttgttggactggataaatgttcaagatagacct
aatgatgttgaatcgctggtcagaaaatgtttcgattctatgagcaggcttgatccaagg
attatccaaccttttctggcagaatgtcgtcaaactattgccaaactagataatcagaac
atgaaggccattaaaggccttgaggataggctctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagccgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctacaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcgttgcttcgtcttgtaacagag
ctcctagaaagggtcaaggttgtagaggcgctcagtactgttcctcaaatgtactgtcta
gctgttgtagaggtggtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacacctgtatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactgttcaggaagtcctttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttaagtgacttgcagttcttgcagtctttttgtccttcagaagtacagccgctactcagg
gtccccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtaaaggcagcacagagtttcgatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctcaaatagtcaagcatcgccacaatctgctaccacaccaaggatggaaagt
acaacagtaaccacaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccgttagaagaattgtctccagacagcatt
gatgctcatacatttgattttgaaactattgcgcatccaaacttggagcaagctcttaag
cagggatcgttagacttggattcattagcagaaagtccagaatctgactttatgtcagcg
gtaaatgaattcgtaatagaagaaaatccagtctctcctaatgtaataagtgatccacaa
agtccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaaatacttgtgtaaagaacgtctcagtagaaaatgcatctctcagt
gtttgcatggagaagtgtagggttattgcccaagactcaaaggtacatttaagaggtata
aaggaagatctttgccactttagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgcacttcgttagaaatagtaaatgctattgagaaggtaaaacttacactt
gaaaaaacactaaaagataaacatcaaaaagaattacagtctttgaaaagtgaatatgaa
actaaaattaataaattattggaagatggtgaagaaaatcaaaagaagattaaaaagtta
aaaggtgacttattaggccttgaggaagttcttcagaataagaatgatgaatttgccatg
gtgaaaaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaagttactt
gaattggaatgccaaatggagacacgaaattctgaaattaaggaactgagacagtcacgt
gagatagtacttgaagacttgaaaaaacttcatgttgaaaacaatgaaaaactacaactc
ctgagagcagaacttgagagtttagagcaaagccatttgaaagaactggaaaacaaccta
caagccaggcatttacaagaatttgagaaggtgctggctgagcacaaggattgtttagat
aaattaaaaaaagagaaccagcatacacttgaacaaatgcaggaagctcatacagtagtt
gtgcaagaaaaacaacaacaagtagaagagttacaactcaaggtttcagatctgtctgat
ttgaggtgcaaattagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
ctgcttttggaagaaagcagaaaccagctacaagagaccttaaaatctcagattgacaag
gaaactgaaagcttaaaaaaagagatagataaattaaacaataaaattcgaattaacagc
gatgaatatcaaatgggcttatcagaactaaggattctgatgaccactgagaaggatcag
tgcatttccgagctagtagacagatatgaagaagaaacaaatttgcttagaactgaacta
aataaagtaacacttcttcatcaaaaaacttctgagacagaaaaaagactttcagagcaa
ataacagaactacaaagtaagttagagttggaagcgaatgccctagaaaaggaaaagatg
gaaaaattgtctctctgtgagcagcaggaaaaatatgaagctattatccataagcttaag
gaagagaaagaactgttagtatctaaccaagaacaagacaggcagttactcattcagaag
ctcaattgtgagaaagaggatgcagtacaaactgcttataaagagtttgaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatacaacaacttgagatccaagtaaatcgg
agtcctcccaccgaatcatctgctgaatcaagcttggttgctgaacttcaagagaagctt
caggaagaaaaaatgaagttcttggagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcgctcactgcagaacagcagaccaactttaacactgtt
ttggcaagagaaaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
atgctaacacaacagcaagaaaaggataaggatttgattgaaacactttctgaagatcga
gctcgcttactcgaagagaagaaaaagcttgaagaagaagtcgttaaactgagaagtagt
aatttttctccatcaacctactcagcggcagcttcagaagcttgtggagcctgcgcagct
gatattcccactgacactgacagactggtgtctgacattgcagctgaagggaggatggac
tccaccatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaaa
cagaggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaacgattgatgtctcagagcatgtcatcagtgtcctcaagacattctgaaaaaata
gcaattagagattttcaggttggtgatctggttctcatcatcctggatgaaaggcatgac
aactatgtattgtttactgttagtccaaccttatatttcttacactcagaatctcttgct
gcactggatctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgcta
ggaaaagtaatggaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccgtggaacaagaaagtataa
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integrated database retrieval system
