KEGG   Caloenas nicobarica (Nicobar pigeon): 135985197
Entry
135985197         CDS       T11056                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04382  Cornified envelope formation
cnic04510  Focal adhesion
cnic04512  ECM-receptor interaction
cnic04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135985197 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135985197 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135985197 (COL4A2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135985197 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cnic04147]
    135985197 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:cnic00536]
    135985197 (COL4A2)
Exosome [BR:cnic04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135985197 (COL4A2)
Glycosaminoglycan binding proteins [BR:cnic00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135985197 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135985197
NCBI-ProteinID: XP_065484332
LinkDB
Position
1:complement(153681083..153829115)
AA seq 1714 aa
MDISQLPSARIFVCQDLGLLLILMEVVLSAVKVDAGGKTYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGLQGPKGHKGERGHPGIAGPKGEVGQRGVTGFPGADG
IPGHPGQPGSRGKPGHDGCNGTVGDPGDPGTPGVFGFPGTIGVQGPKGQKGEPYILPPDI
ASRYRGDPGDPGFNGFQGPPGTLGIQGPVGPRGERGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELMGVPSDKHKGERGEPGQKGEAGTPGEVLYAEKGEEGVMGF
PGQRGLPGINGFPGLSGERGFPGFDGPPGAYGPRGSKGEPGEMGPPGPVSYFPSGFPRKG
ARGDPGVPGVSGLQGDPGEEGDRGLPGFPGFSDADGDKPGLPGEMGPKGEKGEIGSPAYQ
AGPPGFPGKHGTPGLRGLPGPAGPPGALFGLKGQEGTPGRFGAQGFPGLRGQKGPKGEEG
DCSHCLLTEEQRRGSTGSPGPPGFPGTPGQPGRKGEPGDQGPHGLPGYPGAKGFPGPHGF
PGPKGEKGDSLYITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDVIRGFP
GDPGYPGELGPKGFPGEPGLQGEGLPGPKGYRGPPGDHGQDGSPGPPGLPGLPGEPGQLD
CGQVFEDFSRGDGTEPIWSGAGCVRPPKGSQGKPGLPGATGEKGARGFPGDPGPVGYPGL
NGTRGDPGWEGVPGPPGFTGPRGDSGPNGLPGLQGHPGLTGKPGAQGVPGLKGLPGDVLG
APAGSRGDAGLPGFPGLKGLPGDQGVPGIRGADGNPGLPGAKGDPGPQGLPGLMGLPGIP
GTRGFPGPPGNPGPDGGPGPQGPVGPPGARGEDGEQGAPGPIGLKGLAGDKGETGYPGLQ
GGPGVPGPRGVSGMDGFPGDKGSRGSPGIDGFKGMTGLKGRPGIKGIKGEFGPLGAQGDK
GAQGARGFKGDRGDQGPPGEPPKLKPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGLP
GKTGIPGSPGHPSYVAGVKGDIGTKGLAGLKGYPGPAGSPGIRGFPGSTGGRGEKGLPGI
SGIFGTPGVHGEIGEQGETINLPGMPGLKGEIGVPGLPGARGGTGQKGEGGDPGLPGIEG
LKGTQGVPGSVGQEGLPGLVGAPGQQGSPGTPGFQGEKGTPGWPGLPGQPGLPGLRGISG
LHGLPGTKGLPGSPGPDGYGSAGFPGAEGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVPG
PFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGQPG
VSGQTGPKGSRGDPGPVGTPGVRGYPGPKGRKGEQGVIGFMGTVGFPGDLGPIGPKGDRG
VTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGNIGLQGSPGDMGPQGPPGDPGFRGSPGEP
GLQGRGGIPAPPGSRGEQGATGFQGPVGFEGQPGRPGSPGLPGMPGRSVNMGYLLVKHSQ
SEQEPMCPTGMSKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICYY
ASRNDKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQEASIPHCPEGWR
SLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYYANKYSFWLT
TIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq 5145 nt   +upstreamnt  +downstreamnt
atggacatctcgcagcttcccagcgcacgtatctttgtttgtcaggatctggggcttctg
ctgatcctgatggaagtcgtgctgtcagccgtcaaagtggatgctggtggaaagacttac
acgggaccatgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacaggggttcactggaccaccaggattgatg
gggatcccaggactgcaaggtcccaaaggtcacaaaggtgaaagaggacacccaggaata
gctggacccaaaggagaagtgggacaaagaggagtcaccggattccccggggcagatggc
atacctggtcatccagggcagccaggatcaagggggaaaccaggtcatgatggctgtaac
gggacagtaggtgaccctggtgacccgggaactcctggagtctttggtttccctggtacc
attggagtccaaggaccaaagggccagaagggagagccctacatactgccaccggacatc
gcaagccgatacaggggcgatcctggggatccagggttcaatggttttcaaggacctcca
ggtacgctgggtattcaaggacctgttggtccaagaggagagcgaggaagaccaggacca
ccagggcccccaggaccaccaggaccacaaggcaacaggggccttggtttctatggagaa
aaaggtgaacagggccccccaggtcctccaggtccacctgggcttcctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagaacctggacaaaaaggggaa
gctggaactccaggtgaagttctctatgctgaaaaaggtgaagaaggggtaatgggcttc
ccaggacaaaggggactacctggcatcaatggttttccaggactcagtggagaaagaggt
tttccaggatttgatggtccaccaggtgcctatggtcctaggggaagcaagggggaacca
ggcgagatgggtcctccgggaccagtttcctattttccttctggcttcccaaggaaaggt
gcaagaggtgatccaggcgttcctggtgtttctggactacaaggagacccaggagaggag
ggagatcgtgggttgcctggttttcctggattctctgatgcggatggggataagccaggc
ttacctggagaaatgggaccaaaaggtgaaaaaggtgaaataggatctcccgcttatcag
gcaggcccacctgggtttccgggtaagcacggcacaccaggactccgtggtctacctggt
cccgctggaccccctggcgctctctttggattaaaaggacaggaggggacaccaggtaga
tttggcgcgcaaggtttccctgggctaagaggacaaaaaggacctaaaggcgaagaaggg
gattgcagtcattgccttctgactgaggaacaaagaaggggctctactggctcccctggc
cctcctggctttccaggtacccctggccaacctgggaggaaaggagaacctggtgatcag
ggaccgcatggtcttcctggctaccctggagcaaaaggatttccaggtccacatggattt
cctggaccaaaaggagaaaagggagattctttatacataactactaaaggcaccaaagga
atccgaggagatcctggactgcctggcatcagaggtgaagatggtttcccaggtagagat
ggattagatggtttaccaggacagcctggccttccaggtgatgttatcagaggtttccca
ggtgatcctggctacccgggcgagttaggcccaaagggctttccaggagaaccaggcctg
cagggtgaaggactccctggtccaaaagggtaccgaggtcctccaggtgaccatggacaa
gatggaagccctggacctccaggtctgcccggtctgccaggagagcctggccaactagac
tgtgggcaggtctttgaagacttttctagaggagatggaactgagccaatatggtcaggc
gcgggctgtgtgaggccaccaaagggatcccaaggcaagccaggactgccaggagccacg
ggtgaaaaaggtgcaagaggattcccaggtgatccaggtccagtgggatacccagggcta
aatggtacacgaggtgatccaggttgggaaggagtcccaggtcccccaggttttactggg
cccaggggagacagcggccccaacggtctacctggactgcagggacacccaggccttaca
ggaaaacccggtgctcagggagtgccaggactgaagggcttacctggtgatgttttagga
gcaccagcaggttcccgaggggatgctgggctccccggcttcccagggttgaaaggtctg
ccaggagatcaaggagtaccgggaattagaggagcggatggtaacccaggtttgccagga
gccaaaggagatccggggccgcaaggtctccctggtttgatgggattgccgggaataccg
ggcacgcgtggattcccagggccgccgggaaaccctgggccagatggtgggcctggccct
caaggacctgttggtccacctggtgctaggggagaagatggtgagcaaggtgctcctggc
cccataggcctgaaaggtctggctggtgacaaaggtgaaacgggttacccaggattacaa
ggcggacctggcgtgcctggtcctcgtggcgtaagcggaatggacggctttccaggagac
aaaggctcaagaggttcacctggcattgacggtttcaaaggcatgactggcctaaaagga
agaccaggcatcaagggaatcaaaggagaatttggcccgttgggggctcagggcgataaa
ggcgcacagggcgcacgcggctttaaaggtgaccgtggggatcaaggccccccgggagag
ccaccaaagctcaagcccagcatgatgatggaagttaaaggtgaaaaaggagatgttgga
gaaaggggcacaaagggattctttggcttaaaaggtagcaagggaatgccaggcttgcct
ggaaagacaggaattccaggttcccctggacatcccagctatgtggccggtgtgaaaggg
gacattggcacgaaaggactggcaggtctgaaagggtatcctggtccagctggctctcct
ggcatcagaggcttccctggcagcacaggaggcaggggagaaaagggtcttccaggcatt
tcaggcatatttggtactcctggtgttcatggtgaaataggtgagcaaggagaaactata
aacttaccaggaatgccaggccttaaaggggaaattggtgtgccgggcttaccaggagca
agaggaggcacaggacaaaaaggtgaaggcggtgatcctggtctccctggcattgaaggc
ctcaagggcacgcagggtgtccctggctctgtgggacaggaaggtttgccaggactggtc
ggcgccccagggcagcaaggaagccccgggacacctggatttcaaggtgaaaagggaact
cccggctggcctggattaccgggacaaccaggcttgcctggcttaagaggaatcagtggg
ctgcatggtttaccgggaacaaagggcttgccagggtcaccaggtccagatggctacggc
tctgcaggcttcccaggtgcagagggtgacaaaggggaggcgggagagccgagcagagtg
gaaggcagccgaggacctccaggtcagaaaggagacagaggtgttccaggagtcccagga
ccctttggcattcctgggcaggagggatttccagggcctcctgggatttcaaatatatca
ggatatcctggcgataaaggctccccaggtctagatggagtgccaggctatccaggacta
caggggcagcctggaataccagctccaccaggaagcaaaggagaaagtggacaaccaggt
gtgagtggacaaaccggcccaaaaggaagtagaggtgatcctggaccagtagggacacct
ggtgttcgcgggtaccctggaccaaaaggtcgtaagggtgaacaaggcgtcatcggcttt
atgggcacagtaggatttccaggggatttgggacctatcggacccaagggggatagagga
gtaactggctttcagggccctccaggttctcctgggctgccccctcttcctccaaggctg
gttgctgagcaaggttcaccaggtccccgtggaaatataggacttcaaggaagcccagga
gatatgggacctcagggtccaccaggtgatcccggtttcagaggctcccctggagagcca
ggactccagggcaggggtggcattccagctcctcccggctccagaggtgaacaaggagca
acaggatttcagggtccagtgggatttgaaggtcagcccggccgccccggtagccctggg
ctgccaggcatgccgggccgcagcgtgaacatgggctacctgctggtgaagcacagccag
tctgagcaagagccaatgtgtcccactggcatgagcaaactctggagtggatacagcctg
ctgtactttgaaggacaagagaaggcacacaaccaggacctagggctggccggctcctgt
ttggctcggtttagtactatgccattcctctactgtaaccctggggatatttgttattat
gcaagtcgaaatgataaatcctactggctctcaactacagcacctcttccaatgatgcct
gtggcagaagaagacattagaccatatatcagtcgctgctcagtttgtgaggccccagct
gtggcaattgctgtccatagccaagaagcttctattcctcactgccctgaaggctggcgc
agtttgtggatcggatattccttccttatgcacactgctgctggtgatgaaggtggggga
cagtccctggtttcccctgggagctgcctggaagatttcagagcgactcctttcatcgaa
tgcaacggcgcacgtggaacctgccactactatgcaaataaatacagcttctggctcacc
acgatcgaccagcccttccaaagcaagccctcggcagatacgctcaaggcaggactcatc
cgaagccacatcagcagatgtcaagtctgtatgaaaaatttatag

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