Caloenas nicobarica (Nicobar pigeon): 135985218
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Entry
135985218 CDS
T11056
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04382
Cornified envelope formation
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135985218
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135985218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135985218
Cell adhesion molecules [BR:
cnic04515
]
Cadherins
Major cadherins
135985218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Fibulin_C
CSD_RNase_II
SEC-C
Motif
Other DBs
NCBI-GeneID:
135985218
NCBI-ProteinID:
XP_065484377
LinkDB
All DBs
Position
2:119226486..119250022
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AA seq
1105 aa
AA seq
DB search
MSRGPAAAVRLLALLICLNYGNGLYVKVYHQNGRSGMLSHPNSLVRQKREWTVPPAFIRE
EEDNSYRNPIARIHSDLEASGIVVTYAISGQGVTEPPFGLFVIDGKTGDLNITRKVDREE
TPMLLLRGHAQNRNGVDLEKPIDLPIKIVDINDNFPVFSHEVFVGSIEELSEAGTIVMRI
NATDADEPNNLNSKIAYRIISQSPSAAFSMKKDTGEVRVATINLDREAHSSYSLVVEAKD
RGDEPGGNTATCSLEIKILDVNDNVPVVESHAFEVSIEENRANVEILRIKVFDKDEEFSD
NWLANFSFVSGNEGGFFHIVTDKKTNEGILTLVKELDYEQMQSLNLGIVVTNKAEFHKSI
KYTYKAQTIPISVSVINVWEGPIFPGGTKIIEASEKLQIGQIIGQYQAYDEDMGKAAVNI
KYLKGSDIANWITINSQTGEIQLSQNLDYESSYVVNGTYTFTMLGVTTAAPMKTITGTVV
VQVKDENDNCPVLVNPVQTVCSDAKSVDVTARDLDGYPYSDPFSFTVIDEPEGTAKKWII
ATRNGTSIQLIPQYLKIGKTEVPVLVKDFQGLSCDKAQSLQLTVCKCADGGVCRDKASGI
PPVRLGPGAIALIILAFLLLLLIPLLLLLCPCGSGAKGFAAIPDYSEEMLRQWNSEGAAP
QEKTMLSLIPSTGLGSAGAVAGGAATAAAAGMSGEETATGGGSSASHVREQHIADTKERW
EDQRHLLSGAEYGAMAARGAEGLAGIEGKTVLAGGGVAVGVAGAMNEEFLRDYFTDKAVS
FADEDEAQAANDCLLVYSQGESGSPHGSIGCCSFIDGDLDDHFLDDLGDKFKTLAEICIG
RHIDMKDGSSRNESGFGLSDTKSQFLDQQNASSSEQAFASGRCFQPVGSGTEDTMSKEVV
TETTFASHSGQREVQPLPTAHAETNFTMTETSYSAGAPARSATVFLDPKFKENIVVTERV
LAPASSLQGMVEIPDLPHGSNLVVTERMAKTEGAGSGALLGQDLPDSQYVVVRERERVLV
PAAEQGLLSFPTSAEGRSVVVTASGTQSRAEQAAGAGWGSQEHILITDSLRNPVGSNIEG
PPPASATLSKSSRVTKYSTVQYTRS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggccccgccgcggcggtgcggctgctggcgctgctgatctgtttgaattac
ggaaatggactctatgtgaaggtttatcatcaaaatggcaggagtgggatgttgtctcac
cccaacagcctggtcagacagaagcgagaatggacagtccctccagctttcatacgggaa
gaagaggacaattcctacaggaacccaattgctagaatacattctgatcttgaagcttca
gggatagtggtgacttacgctatatccggtcaaggagtaacagaacccccttttggatta
tttgttatcgatggcaagactggagacctgaacataacgagaaaggttgacagggaagag
actccgatgctgcttctcagaggtcatgctcaaaataggaatggagtagatctggaaaaa
ccaatagacctccccattaaaattgtggatataaatgacaattttccagtgttttcacat
gaagtttttgttggttcaattgaagaattaagtgaagcaggtaccattgtaatgaggata
aatgcaacagatgcagatgaaccaaataacctaaattccaaaattgcctacaggatcatt
tcccaaagccctagtgctgcattcagtatgaagaaggatactggtgaggttcgagtggca
acaataaaccttgacagagaggcacatagtagctattctttggtggtggaagcgaaagac
cgtggcgatgaaccaggtgggaatactgcaacatgttccttagaaatcaagattttggat
gtcaatgacaatgtgcctgtggttgaaagtcatgcatttgaagtaagcattgaagaaaac
agagcaaatgtggaaattttgcggataaaagtatttgacaaagatgaagagttctctgat
aactggctggcaaacttttcctttgtttctggtaatgaaggcggcttttttcatatagta
acagataaaaaaacaaatgaaggaattttgactcttgtgaaggaactggattatgaacaa
atgcaaagcctaaacttgggcattgttgttacaaacaaagcagagttccacaagtcaatt
aaatacacttataaagcacaaacaattccaatcagcgttagtgtgattaatgtgtgggaa
ggccctatcttccctggtggcacaaaaattattgaagcaagtgagaaactgcagatcgga
cagattattggacaatatcaagcctatgatgaagacatgggtaaagcagcagttaacatt
aaatacttgaaaggaagcgacatagcaaactggatcacaataaactcacagacaggtgaa
atccaactttcccaaaatctcgattacgaatcgtcttatgtagtaaatggtacctacaca
ttcaccatgttgggtgtaactactgctgctcctatgaaaacaatcacaggcacagtcgtt
gttcaagttaaagatgagaatgataactgcccagttcttgtgaaccccgtgcagactgtg
tgttcagatgcaaaatcagttgatgttacagctcgtgatttggatggttacccatacagt
gatcccttcagctttactgtcattgatgagccagaaggaacagcaaaaaaatggataatt
gcaaccagaaatggcaccagcatacagctgataccacaatacctgaagataggaaaaact
gaagttcccgtcctagtaaaggatttccaagggttgagctgtgataaagcacaatctctg
caactgactgtttgtaagtgtgcggatggtggcgtatgcagagacaaagctagtggcatt
ccaccagtgcgtctgggaccgggagcgattgcgctgatcatcttggcatttttacttttg
ctgcttatacctctgttactgctgctgtgtccctgcggttcaggagcgaaggggtttgct
gcgatacccgactacagcgaagagatgttgcgtcagtggaacagcgaaggggcagctccc
caggagaagacgatgctaagcctcattccatccactggactggggagcgcaggagcagtg
gctggcggagcagcaacagcagcagcagcaggaatgagcggagaggaaactgcaacagga
ggaggcagctctgcctctcatgtaagagagcagcacatcgctgacaccaaggaaagatgg
gaagaccaaaggcatctcctttctggtgctgaatatggagccatggcagccagaggggct
gaaggcctggcaggtattgaaggcaagacagtgctggctggaggaggagtcgcagtgggg
gtggcaggagccatgaatgaagaatttttgagagactacttcactgataaagctgtctct
tttgcggatgaagacgaagcccaagctgcaaacgactgtctcctggtttattcccaggga
gagtcaggctcgccccacggctccatcggctgctgcagctttattgatggtgatcttgat
gaccattttcttgatgatttaggagacaaatttaagactctagcagaaatatgcataggc
agacacatcgacatgaaagatggtagctccaggaatgaatcaggtttcggtcttagtgac
acaaagtcacagttcttagatcagcaaaatgcttccagctccgaacaagcctttgcctca
ggcaggtgcttccagcccgtgggcagtggcacagaagacaccatgtccaaggaggtggtc
acggaaacaacctttgcatcccactctgggcaacgtgaggtccagcctcttcccactgcc
catgcggagaccaatttcaccatgacggaaacatcctactctgcgggggctcctgcccgc
tcagccactgtctttctagacccaaagtttaaggagaacatagtggtgacagaaagagtc
ctggcacccgcgtcgagcttgcagggtatggtggaaatccctgatttgccacatggaagt
aatctggtggttacagagagaatggcgaagacggagggcgctgggtcaggagccctattg
ggtcaggatctccctgactcccagtacgtcgtggtgagggagcgggagagggtgcttgtg
cccgctgcagagcagggcttgcttagcttccccacttcggcagagggtcgcagcgtggtg
gtgacagcctcggggacacagagcagagccgaacaggcagcaggtgctggctggggaagc
caagagcacatattgatcacagactccctgcgtaacccggtgggctccaacattgaaggg
ccacctcctgccagtgccacactgagcaagtcttccagggtcaccaagtacagcacagtg
cagtacactcgctcgtag
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