Caloenas nicobarica (Nicobar pigeon): 135985220
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Entry
135985220 CDS
T11056
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
135985220 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cnic01007
]
135985220 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnic03016
]
135985220 (GARS1)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135985220 (GARS1)
Enzymes [BR:
cnic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
135985220 (GARS1)
Amino acid related enzymes [BR:
cnic01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
135985220 (GARS1)
Transfer RNA biogenesis [BR:
cnic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
135985220 (GARS1)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
135985220 (GARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
135985220
NCBI-ProteinID:
XP_065484378
LinkDB
All DBs
Position
2
Genome browser
AA seq
722 aa
AA seq
DB search
MPLPPRSVLPALLRRLRRLACPPAAPLRTRPAPAATPMDGPQAEALLAPLRQAVRHQGEL
VRKLKEEKAPQVDIDRAVAELKARKRVLEAKELALQPKDDIVDRVKMEDTLKRRFFYDQA
FSIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDK
FADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAEKKAEMENVLTQLDNYGQQELADL
FVNYNVKSPITGNDLSPPVSFNLMFKTSIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQG
KLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKNHPKFQNVADLNILLYS
SKAQVSGQSAHLMRLGDAVQQGVINNSVLGYFIGRIYLFLTKVGVSPEKLRFRQHMENEM
AHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLIAEKPLKEPRTVNIVQF
EANKGAIGKAYKKDAKVVMEYLSVCDECYITEMEQLLNEKGEFTVETEGKTFKLTKDMVT
VKRFQKTLHVEEIIPNVIEPSFGIGRIMYTVFEHTFHIREGDEQRTFFSFPAVVAPFKCS
VLPLSQNQEFMPFVKELSEALTRNGISHKVDDSSGSIGRRYARTDEIGVAFGITIDFDTV
NRTPHTATLRDRDSMRQIRAEISELPAIIRDLANGYLTWADVEAKYPQFEGQETGKKDTI
EE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccgccccgtagcgtcctgcccgccctgctgcgccgcctgcgccgcctcgcc
tgcccgcccgccgccccgctccgcacccggcccgccccggccgcgacccccatggacggc
ccgcaagccgaggcgctgctggcgcccctccggcaggcggtgcggcaccagggagaactg
gtaaggaagctgaaggaagagaaagctccccaagtggatatagatagagctgtagcagag
ctcaaagctcggaagagggtcctagaagcaaaggagctggccttgcagcccaaagatgac
atcgtggacagagttaaaatggaagacaccctgaaaaggaggtttttttacgatcaagcc
ttttctatttatggaggtgtcagtggtctgtatgactttgggcctgttgggtgtgctttg
aagaacaacatcatccaggcatggagacagcactttattcaggaagagcaaatcctggag
atcgactgtaccatgctcacgccagagcctgttctgaagacttctggccatgtagacaag
tttgctgacttcatggtgaaagatgtgaaaaatggggaatgttttcgtgctgatcatctc
ttaaaagctcacctgcaaaagcttatgtctgacaagaagtgcacagcagagaaaaaggca
gaaatggaaaatgttctaacacagttggacaattacggccagcaagaactcgcagatctc
tttgtgaactacaacgtgaaatcacccatcactggtaatgacctgtcccctcctgtttct
ttcaacctgatgttcaagacctccattgggcctggaggaaacatgcctggctatctgagg
ccagaaactgcccagggaatattcctcaacttcaaacgtcttctggagtttaaccaaggc
aaactgccttttgctgctgcccagattggaaattccttcagaaacgaaatctcaccccgc
tccggccttatcagagtgagggaattcaccatggcagaaattgagcactttgtggacccc
agtgagaaaaatcaccccaagtttcagaacgtggcagatctcaacatcctcctgtactct
tccaaggcccaggtcagcgggcagtcggcccatctaatgcggctgggagatgctgtccaa
cagggtgtgatcaataactccgttctcggttacttcattggcagaatctacctcttcctt
acaaaggtcggtgtatccccagagaagctgcgcttccgacagcatatggagaatgagatg
gctcattatgcctgtgactgctgggatgcggagtccaaaacatcatatggttggattgag
atcgttggctgtgctgatcgttcctgctatgacctctcctgccatgcccgtgccaccaaa
gttcctcttatagctgagaagcctctcaaagaacctagaacagttaacattgttcagttc
gaggcaaataagggagccattggcaaagcttataagaaggatgcgaaggtggtgatggaa
tacctgtccgtgtgtgacgagtgctacatcactgagatggagcagctgctcaatgagaaa
ggggaatttactgttgaaactgaagggaaaacttttaaattaacgaaggacatggttact
gtgaagagatttcagaaaacattacatgtggaagaaatcatcccaaatgtaatcgaaccc
tcgtttggtattgggagaatcatgtacacagtgtttgaacacacattccacatccgagaa
ggagatgagcagagaacgttcttcagcttcccagctgttgtagcaccattcaagtgctcc
gttcttccgctaagccagaatcaggaattcatgccttttgtcaaggaattgtctgaagca
ctcaccaggaacggcatctctcacaaggtagatgattcctctggatccatcggccggcgc
tacgccaggactgacgagattggcgtggccttcggcatcacgatcgacttcgacaccgtt
aaccggacgcctcacaccgccaccctgagagaccgtgactccatgcgccagatccgagct
gagatctctgaacttcctgccatcattcgtgacctggcgaacggttatctaacctgggct
gacgtcgaggcaaaatatccacaatttgagggacaagagactggcaaaaaggacacaata
gaggaataa
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