Caloenas nicobarica (Nicobar pigeon): 135985240
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Entry
135985240 CDS
T11056
Symbol
DYNC2I1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cnic03037
]
135985240 (DYNC2I1)
Cilium and associated proteins [BR:
cnic03037
]
Primary cilia and associated proteins
Dynein and associated proteins
135985240 (DYNC2I1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_RFWD3
WD40_WDHD1_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
135985240
NCBI-ProteinID:
XP_065484412
LinkDB
All DBs
Position
2:11187894..11218070
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AA seq
1046 aa
AA seq
DB search
MEGDKRRTKEDTWKSEELRKHLRATQPDSQNEDQKQREKKLQKEKSLHDTDAYKHERKDR
GKSKERTRERERFKSVERDRDKMREREKGKEHQRRGDQERYKDKLQESSLKKESYSVPKH
KDRESDREQDKKHKRHDIKQTETHNLKSFEGRDKEHHRRRESGHHLEEKKPRSEERERRH
TEKKLHQNFPSAVHAFLTGISDNDTKKSIGKFLADEAEEGECVHKLQKDQELNKEGERRH
REKKEYSIRPGKEMLSKERSHKRYEKEEKGKHKSKRSKEGLSHGNREGQPAEAKERIKRA
ENESKKYDLGNSKYKTEERIQEEMSHQRLRTVKDNAKLIEKEERDTREEKVKDTHIFNSD
TGFDNLSANYEDDFEDYEDDFDDDEDESGEEKDAEENPREIPFSRTSEIEEIQRAISAEN
DRICTSLPKKIENEKKEPIMERQCSSVRNPFCGIFMDFQMANQRQSSRSMASKQKKRSSE
LLPLIDLDFSVSFSLLDLPPVNEYDMYIRNFGKMNTKQAYVQCNEDNLERDIQTEEVETL
EKWTQHPAESAIVSGGPVNSQDVSVNGALTPKIDSQKLANFLRSACQVIAVLLEEDQVAT
QPRWKPGSRQTSLSISDSCFQLNTNQPFLHDRKISCLYVSQVQRQTLLSVHGLPEKAGVG
LLNRKSIICVWNIWQPSSPQKLLMCDSEVTCCCFSPNKTTLVFAGTIDGSLLVWDLREDS
RMHPHVMIGDTDWTFRVPTFSTDGVLNTVNHTSPILAVEPVSTSLHTDQNYRLSSLSYQE
GMSGPPFQIASMDENGILNMWVVVELQKVDLAGSQTDLGLIPGGKVKLVHSSTVELNNSL
FPKHVRQRMPQTLTIKFLSSNPNNFIVGTNIGLVGHGTRHDLKVVPKLFRPQESGLRSIS
INAIDFFPFGKPLFLVGCSDGSIRLHQMTSEHPLLQWNGSTSGQPVIALQWALTRPAVFF
VLDASSNIYIWDLLENDLLPVAKQTIPLENVVTMTLLGEPEKTNGLLGLVLAKASGEIDI
QFVKKKWALPQPEESEKVHRILSQSF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacaagagaagaaccaaagaagatacttggaaatcagaagaacttagaaaa
catcttagggcaacacaaccagatagtcaaaatgaagaccaaaagcagagagaaaagaaa
ttgcagaaagagaagtctcttcatgacacagacgcttacaaacatgaacgcaaagacaga
gggaagagcaaggaaagaacaagagagagagagagatttaaatctgttgaaagagacaga
gataaaatgagagagagagaaaagggaaaagagcaccagagaagaggggaccaagagaga
tacaaagataagcttcaagaatcaagtttgaagaaggaaagctacagtgtaccaaaacat
aaagacagggagagtgatagagaacaagacaaaaagcataaaagacatgatataaagcaa
acagagacacacaatctgaaatcatttgaaggaagagataaagaacaccacagaagaaga
gaaagcgggcatcacttggaagagaagaaaccgagaagtgaagagcgagaacgaagacat
acagaaaagaagctacatcaaaattttccatctgctgttcatgcctttcttacaggaata
tcggataatgataccaaaaagagcattgggaagtttttagccgatgaagctgaagaaggt
gaatgtgtacacaagttacagaaagatcaagagttgaataaagagggagaaagaagacac
agagaaaaaaaagaatattctattaggccaggaaaagagatgctttcaaaagagagaagt
cataaacgttatgaaaaggaagagaaaggaaaacataaatcaaagagatctaaagaggga
ttgtcccatggaaacagagaagggcaaccagcagaagctaaggagaggataaaaagagca
gaaaatgaaagcaagaagtatgatctagggaacagcaaatacaaaacagaggagagaatt
caagaagaaatgagccaccagcgcctaaggactgttaaagataatgcaaaactcattgaa
aaagaagaaagggacacaagagaagagaaagtgaaagatacacacatctttaattcagac
acaggatttgataatttatcagcaaattatgaggatgattttgaagattatgaagatgat
tttgatgatgatgaagatgaaagtggtgaagaaaaagatgcagaagaaaatccaagagag
attccattttccagaacatcagaaattgaagaaattcaaagagcaattagtgcagaaaat
gatagaatttgtacttcactgccaaagaaaattgaaaatgaaaaaaaggagccaatcatg
gaaaggcaatgctcttctgtcagaaaccctttttgtggaatattcatggattttcaaatg
gcaaaccaacgacaaagtagccgaagtatggctagtaagcagaaaaaacggagttcagaa
cttctcccactaattgatctggacttctcagttagtttttcgttactggatttgcctcct
gtaaatgagtatgacatgtatatcaggaattttggtaaaatgaacactaagcaggcatac
gttcaatgtaatgaagacaatcttgagagagacattcagactgaggaagttgagacactg
gagaaatggacacagcatccagcagaaagtgccattgtatctggaggtcctgtaaacagc
caggatgtgtcagtgaatggagctctaacacctaaaattgattcacaaaaattagcaaat
ttcctccggtctgcttgccaggtgattgctgttttgctagaggaggatcaagttgcaaca
caacccaggtggaaaccaggttctcgacaaaccagtctgtctattagtgacagctgtttc
cagttaaatactaaccagccattcctccatgaccgaaaaatatcctgcctatatgtctct
caagttcagaggcagacgctactttctgttcatggattacctgaaaaggcaggtgttggt
ttactgaatagaaagagcatcatatgtgtttggaacatctggcagccctccagtcctcag
aaacttttaatgtgtgactcagaggtgacatgctgctgctttagtccaaataaaacaaca
ttagtttttgctggaacaatagatggctcattgttggtgtgggaccttcgagaagactcg
agaatgcaccctcacgtgatgatcggtgacactgactggacatttcgagttccaacattt
tccactgatggtgttctaaacacagtaaaccacacctctcccatactagcagtggaacct
gtctcaacctctctccacactgatcagaattacaggctctcaagcctctcttatcaggag
ggaatgtcaggccctccatttcagatagcttcaatggatgaaaatggaatcctcaatatg
tgggtagttgttgagttacaaaaagtggatttagctggatcacaaactgatttaggttta
attcctggagggaaagtgaagttagtacatagctctactgtggaattgaataacagcctt
ttcccaaagcatgtgcgccagagaatgccccagacactgactattaaatttctgtcttct
aatcctaataatttcattgttggaacaaacatcgggctggtaggccacggtacaagacat
gatttaaaagttgttccgaaactattcagaccccaggagagcggactgagatcaataagc
atcaacgcaattgatttcttcccttttggaaagccactatttttggttggctgttcagat
ggaagtatcaggttacaccaaatgacatcagagcatcccctcctgcagtggaacggcagc
accagtggccagccagttattgccctacagtgggctttaaccaggcctgccgtgtttttt
gtcctggatgcatcatctaacatttacatttgggatcttctggaaaacgatttgttgcct
gtggcaaagcagactattccattagagaatgttgtaactatgactctcctgggagaacca
gaaaaaacaaatggattattagggcttgtgttggccaaagcatctggagagatagacatt
cagtttgtaaagaagaagtgggcattacctcagcctgaggaatctgaaaaagtacataga
attttatcgcaatctttttag
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