Caloenas nicobarica (Nicobar pigeon): 135985252
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Entry
135985252 CDS
T11056
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cnic03037
]
135985252 (RTTN)
Cilium and associated proteins [BR:
cnic03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135985252 (RTTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
Motif
Other DBs
NCBI-GeneID:
135985252
NCBI-ProteinID:
XP_065484434
LinkDB
All DBs
Position
2
Genome browser
AA seq
2230 aa
AA seq
DB search
MELSSLVRKLGHELAEIRERSLKTILFKLDHNLISYADLVHEKMLFLNLLEWFNFPVVPM
KEEVLNFVNDLIQHPPAAQKLMGIGAVEFFSQLRPDVDPNLQAIIDGIVDGLFFLPSGLP
SSSLSVCYQAQSQPSVDQPVPPQEELFTGYFCQGRSHLLPLEVPPRRTVVKCLKFSTFPW
LTLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDVIMQDFPAEIFLQRPKIVQSLLSLL
NLAFGGDGRHRLALQAVSCLRQLCIFLRSRLNFHRDPSFSSTEQGTASQNSSISYCREAR
GLPHSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAASSSGNSTQANANSRISPHSPLDV
GHIDLPDIENEDTLELQMKQLSLPQFCVSILENAIPLLRTGSRRVTMEVLELLVEDMFLI
GDAISENVWEDDSLFALELKDKLLLVLGLLGETILYHKTNISAEQPEVMLVHHRMAFIST
SLFTVRLLQILLPVEKASKVLQKSLLNALFLLSLDLSFSLEYPSIHESVAAYLEQMSTEN
YSIYKQASEAAYSIECTCSFLTEVHKKGDESLSELVELADQALSSLPYHQHVPLLHESIH
ICSNIWKSAEANSLLQAESQKVLLRLLSHPSLKIKTEAYQCCLEVVKDSLGIHNVAKPVS
SVCHGVHFLLHPKVLYEICTFGLQEDKNEVNCTAKAILMHLLQGRLVMAALTWNKFIEAL
CPVIPVLQGYADTKDTLGNCIFTLSETTSDKGEGVLPRTTRLRAALRLLFSKKQLVRSVA
LKHLTFHLLNEEGANLKRPRLHGSVLSSISNLFVIERAIELKLDDKTESIFKAETVEKLY
DVFTSGAVDLVLRKSAADQLAIILEDIKMHGIVKKLGVIEKILAYLNECISVDGKLMESI
VLPCLTLLRKLVYADPVVRLSLAQQSSLLLLLFRVSLIFQNDRAVLTETTVLLCLLLFDE
VARTETWADDITINDTGLPAFSLPVAVVRRYHLPVRITGHHIVSPNTIVVPLSSEYLAMK
PVSDMLKMAWNLSWYHGIENLLQLTNYEKEAETLLDSLKLSSEDILILKITRTNCGLQDC
LNSIVRAVSHRDVRAALTRLSFYILNDRLALKCSSGSCGTTLKSFVWQKAINRFLQVLPA
SLEDEKLLVDVLRFLNNLLREQRSNLESDHLKWILKSLLKNKPQSLLGLLVRAESQVRDE
VDEIQTAVSQQLDKELIHLFNTLLFCSVSVTDREGLELARSFRTELALKLLQCLRLTDAP
HFYGLPSLERTLRGMVHVTALPGWSTYSAAVEPVAICKKYLAGLLEVISSFYVEWGGNAM
SFMGKGVTKSTVLCLLHLSHEMMAQAKVSDWISLWSLPYDNSEEQVLSQLGLAWLIPLWV
DRDPEVRFTALGIGSALTSLEAGCIALAESCQNISGGLWGTVINILLDQSECSMVRREAA
FILQNLLVLPIPTEDMKGCIWQGPCVHDEESGLSQTGKPALRALLYHCQFYEHVNQMVKH
CYLGCYMFDLKSSKENNLIVEKGGITDFDDSLNLWKAPSSQSRSSHSQSTSETMIRSASP
SLGSVTELQAIVPKNSTSFIPETVVDRLMAQGQSDTTTTESLSQHDSPMSATLSKQRAVV
TPALLSAVCSLLHNLLVVTPKDTGIALQQAHLLTALSSLVSANLIGRCILELRAPLGHPC
HIEDVKAHVLSLLQYLSSVSRLLKSCILVDSQLVIQDELLKPLLGNTFMILSIRSKDGLD
TELTSVLHETWVDVFNLLATLLWKCGQISFPSMTAAFANHCTAVIDTICDCIHQSTTYPA
LYMASLQFLSILLNEEGRRQLQDKQSLCQNTTISFLLDHTEGCQAPVTQLTALIIQVCER
KKDALKEVATNALLSLLAVSKNAQKCALKVDLIDSCIENMKHIHAQLNLDALKPGKAQKK
KEDNLIKQLRCSMQLLRNCLFQNEECKMAALKAHLIPVLHSLWPWFLIDDSSMQIALHLL
CVYTANYPAGCASLCCASGGQSLLPSGRSAAGNSLMHNILKLASQVSNDNSPVQQVVFCL
LSNLALSHDCKGIIQKSNFLQNFLSLSLPKGSHKNPGNVSTLWLKLLLNITFGEDGQQMV
MKINGFLDQIVEMCQYKHKNSQHLALLILHNICFSPANKPKIIANDKAIAVLSACLESDS
RAIQRIGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKTTPQPEENELHAYHLKC
LENVVQLLDC
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtcgtcgctcgtcaggaagctgggtcatgaactggcagagataagagaacga
tctctgaagactattttatttaaactagatcataacttgatttcgtatgccgatctggtc
catgaaaaaatgcttttccttaatcttttggagtggttcaattttccagttgtcccaatg
aaagaagaagtactaaattttgtgaacgatttgatccagcatccacctgctgcccagaaa
ctgatgggaattggtgcagtggaattcttctctcagcttcggcctgatgtggatcccaac
ttgcaggctataattgatgggatagtagatggactgttcttccttccttctggacttcct
tctagttctttatcagtatgttatcaagctcagtctcagccttcagtagatcaaccagtt
ccacctcaagaggaattgttcactggatatttttgtcaaggtagaagtcacctgctgcca
ttagaagtacctcccagaagaacagttgtgaaatgcttgaaattttctacatttccttgg
ctcactctgacttcaacagatagacatgttctttcatcaaatgaaagctctctgagaagt
aacaaccagagtttaatttggagtacgtgtgagcttcttcaggatgtgattatgcaagat
tttcctgctgagatctttcttcaaaggccaaagattgtacagagccttttgtctctgcta
aacctggcttttggaggagatggaagacatcggttagctttgcaggctgtgtcatgcctg
cgacagttgtgcatcttcttgagaagcagacttaactttcacagagatccaagtttttct
tccacagagcaaggcactgcttcccagaattcctctatatcttactgtcgagaagcaaga
ggtcttcctcattctcagaatccatcacctggaagtagtagccctcgcccatctgtgatt
gggcggacagttcagcgtcctagaggagacggtcaagactgggatgcagcatcctccagt
ggaaacagtactcaagcaaatgcaaactccagaatctccccacattccccacttgatgta
ggacatattgacctaccggatattgaaaatgaggacactttggaattacagatgaagcag
cttagccttcctcagttttgtgtttccatcttggaaaatgcaatacctcttctaagaaca
ggcagtaggagagtaacgatggaagttcttgaattgcttgttgaagacatgttccttatt
ggtgatgctatttctgaaaatgtctgggaagatgatagcctttttgcattggaattgaaa
gacaaattgcttctggtcttgggtttgcttggagaaactatattatatcacaaaaccaac
ataagtgcagagcagcctgaggtgatgttggtgcatcacagaatggcatttattagcact
tcactatttactgttagattgctgcaaatacttctccctgtagaaaaggcgagtaaagtt
ttacaaaagagtttgctgaatgctttgtttcttctctctctggacttgtctttctccttg
gaatacccaagcattcatgaatccgttgcagcctatctggagcagatgagtactgagaac
tacagtatttataaacaagcttcagaagctgcatattcaattgaatgcacctgtagcttt
ttgactgaagttcataagaagggggatgagagtctttctgaattagtagaattggcagat
caggctttgagtagtctaccctaccatcaacacgttcccttgcttcatgaaagcattcac
atatgctcaaatatttggaagtctgctgaggcgaactcattgctccaggctgagagccag
aaagtgcttctccgtctgttgtctcatccttcgctgaaaataaaaaccgaagcttatcag
tgctgtttggaagtagttaaggactctttaggtattcataatgttgctaagcctgtgtct
tcagtctgccatggagtgcattttcttcttcatccaaaagttttgtatgaaatctgtact
tttggtcttcaggaagataagaatgaggtgaactgcacagccaaggccattctgatgcat
ctgctgcagggacgattagtaatggcagcattgacttggaacaagtttattgaggccctc
tgccctgtcattcctgttttacagggttatgctgacacaaaagatacactaggtaactgt
atcttcactttgagtgaaacaacctctgacaaaggagaaggtgttctccctagaactact
agactacgggctgctctgcgtcttcttttctcgaaaaagcagttggttcgttctgtagca
cttaaacatttaacattccatcttttgaatgaagaaggggcaaacctgaaacgtcctcgt
ctgcatggtagtgtgctttccagcatttcaaacttatttgttatagaaagagctattgag
ctaaaattggatgataaaacagagtctatatttaaggcagaaactgttgaaaagctatat
gacgtcttcacttctggtgctgttgacctagttttacgaaagtctgcagccgaccagcta
gctatcattttagaagatatcaaaatgcacggcattgtgaaaaagttgggtgtgatagaa
aagattttggcttaccttaatgaatgtataagtgtggatggcaagcttatggaatccatt
gtgttaccatgtctaacactcttacgcaagcttgtatatgctgatccagttgttcgtcta
tccctagcacagcaatcatctttattgctcttgttattcagagtttccctgatattccaa
aatgatcgtgctgttttaactgaaactacagtattgctttgtcttctgttgtttgatgaa
gtagcaagaaccgaaacatgggctgatgatataaccattaatgatactggcctacctgcc
tttagtttacctgttgctgttgttagaagataccatctcccagtgaggatcacaggtcat
catatagttagccctaatactattgtggtgccattgtcttctgagtacttggctatgaaa
cctgtgtcagatatgctcaagatggcttggaatctgtcatggtaccatgggattgaaaac
ctattacaactgacaaactatgagaaggaagcagaaacattgttagactcgctaaaacta
tcctcagaagacattcttatactcaaaataactcgtacaaactgtggactgcaggattgt
cttaattcaattgttcgggcagtatcccacagggatgttagggctgctctcactaggctt
agtttttacattctgaatgacagacttgcattaaaatgcagttctgggtcttgtggaacc
actttgaagagctttgtttggcaaaaagcaataaacaggtttctgcaagttcttccagct
tctctggaggatgagaagctcttagtagatgtcttaagatttttaaacaatctgcttaga
gagcagagatcaaatttggagtcagaccatctaaagtggatcctgaaatcattgcttaaa
aataagccacaatcccttttggggctcctggtgcgagcagaatcccaagtgagggatgaa
gtagatgaaatacagactgctgtcagccagcaactggataaagaacttattcatcttttt
aacacattattattttgttcagtgtcagtgactgacagagaaggcttggaacttgctaga
tctttcagaaccgagctggctctgaaactgctacagtgtttaaggctaacagatgcaccg
catttttatggacttccttcactggagagaacattacggggaatggttcatgttactgca
cttccaggctggagtacctattctgctgcagtcgaacctgttgcaatttgtaagaaatat
ttagcaggtcttcttgaggtcatctcatcattttatgttgaatggggaggaaatgctatg
tccttcatgggaaaaggtgttacgaaaagcacagttctttgcttgcttcacttatctcat
gaaatgatggctcaagccaaggtgagtgactggatatctctttggtctttgccttatgat
aacagtgaagaacaagttctttctcagctaggtctggcatggctcattcctttatgggta
gatagagaccctgaggtcagatttacagcacttggaataggatcagctcttacatctctt
gaagcaggatgtattgctttagcagaaagttgccagaacatttcaggaggcctgtgggga
acggtgataaacatccttctggaccaatctgaatgtagcatggtacgcagagaggctgct
tttattctacaaaatctccttgtgcttccaattcctacagaagacatgaaaggttgtatt
tggcaaggtccttgtgtacatgatgaagagtctggcctatctcagacaggaaaacctgca
cttcgggcccttttgtatcactgccagttctatgaacatgtgaatcagatggtgaaacac
tgttacctgggatgctatatgtttgatttgaaatcttccaaggaaaacaacctcattgta
gaaaaaggtggtataactgattttgatgattctcttaatctttggaaggctccatccagt
caaagccgatcttcacattctcagtcaacatctgaaactatgattcggtctgcatcacca
tccctggggagtgttactgagcttcaggcaatagtcccaaaaaattcaaccagttttatt
cctgaaactgtagttgatcggctcatggcacaaggtcaaagtgatacaaccacgacagaa
tctctaagtcaacatgattctcccatgtctgctaccctgtctaaacagcgtgctgtagtc
acacctgcccttttgtcagccgtttgcagccttctgcacaacctgctggttgtcacacca
aaagatactggaattgctcttcaacaagcacatttgctaacagctctcagcagtcttgta
agcgctaatctgattgggagatgtatcttggaactgagagctccattgggtcatccatgt
catatagaagatgtaaaagctcatgtattatcactacttcagtacttgtcatctgtgtcc
aggcttctgaaatcatgtatattggttgactctcagcttgtaatccaggatgaactgttg
aaacctctcttgggaaacaccttcatgattctttccattcgctccaaagatggcttagat
acagagttaacatctgtgcttcatgaaacatgggtagacgttttcaaccttctagctaca
ttactgtggaagtgtggccaaatatcttttccatccatgacagcagcctttgcaaatcat
tgtacagcagtaattgataccatatgtgattgtattcatcagtcaaccacatatcctgct
ttatatatggctagtctacagttcctctccatccttttgaatgaggaaggaagaagacag
ctccaggataaacagagtttatgtcagaatacaactattagctttcttctggatcacact
gaaggatgccaggcaccagtaactcagcttactgcattaattattcaggtctgtgaaaga
aaaaaggatgcactgaaagaagttgctacaaacgcattgctgtctctgttagctgtcagt
aaaaatgcccagaaatgtgctttgaaagttgacctgatagacagctgtattgaaaacatg
aaacatattcatgcacagctgaatttggatgccctaaagcctggaaaagcacagaaaaaa
aaggaggataaccttatcaaacaattaagatgttctatgcagctcctcagaaactgcctc
tttcaaaacgaagaatgcaaaatggcagcactcaaagctcatcttattcctgtgctgcat
tcgctgtggccgtggtttttaatagacgactcctcaatgcaaatagctctgcatttgctt
tgtgtctacactgcaaactatcctgcaggttgtgcttcactttgttgtgccagtggtgga
caatcattacttccatctggacgaagtgcagctggcaattcattaatgcataacatcttg
aaattggcttcccaagtgtcaaatgataacagcccagttcaacaggtggtcttttgtctt
ctttctaaccttgctctgtctcatgactgtaaaggcattattcagaagagtaacttcctg
cagaactttttgtctctttcattaccgaaaggaagtcataaaaatcctggcaatgtgtct
accctttggctaaagctgctactgaacataacttttggggaagatggacagcagatggtc
atgaagataaacggttttttagaccagattgtggaaatgtgtcaatacaagcacaagaac
agccaacatctagcacttcttattctacataacatatgttttagtccagcaaataaacca
aagataatagctaatgataaagcgattgcagtactgtctgcctgtttggaaagtgacagt
cgtgctattcagagaataggagcagcttcactttgggctttgctccacaactatcagaag
gcgaaagtgactttgaagaatccatcgataaggagaagaatagatgaggcttattcttta
gtgaagaaaactactccacagccagaagaaaatgagctacatgcctaccatttaaagtgc
ttagagaatgtagtgcagcttcttgattgctaa
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integrated database retrieval system
