Caloenas nicobarica (Nicobar pigeon): 135985323
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Entry
135985323 CDS
T11056
Symbol
SEMA5A
Name
(RefSeq) semaphorin-5A isoform X1
KO
K06841
semaphorin 5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_1
Sema
TSP1_spondin
TSP1_2
TSP1_ADAMTS
TSP1_CFP_C
PSI
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
135985323
NCBI-ProteinID:
XP_065484583
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Position
2
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AA seq
1078 aa
AA seq
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MTTMNGSCLLAMLLAGLGVLGILEPTTTEDTHCHRAEHPVIAYKEIAPWLHVFRAEDAVD
FSQLAFDPGQKELIAGARNYLFRLQLEDLSLIQAVEWQCDEATKRACYSKGKSKEECQNY
IRVLLVGGNHLFTCGTNAFTPICTNRTLSNLTEIHDQISGMARCPYSPQHNSTALLTASG
ELYAATAMDFPGRDPAIYRSLGALPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENA
VEHDCGKTVFSRAARVCKNDIGGKFVLEDTWTTFMKARLNCSRPGEIPFYYNELQSTFFL
PELDLIYGIFTTNVNSIAASAVCVFNLSAITQTFNGPFKYQENSRSAWLPYPNPNPNFQC
GTMDQGLYVNLTERNLQDAQKFFLMHEVVQPVIPIPYFMEDNSRFSHVVVDVVQGKDMLF
HIIYLATDYGTIKKVLAPMNQSSSSCLLEEIELLPKTQREPIRSLQILHSQSVLFVGLQE
HVIKVPLKRCPFYKTYSACIGSQDPYCGWDMVMKKCTTLEESLSMSQWEQSITVCPMRNL
TVDGHFGTWSQWKPCTHTDSASVGSCLCRTRVCDSPAPQCGGWLCEGPTMEIANCSRNGG
WTPWTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHVFWT
GWGPWERCTAQCGGGIQARRRTCENGPDCPGCSVEYQPCNTNACPELKKTTPWTPWTPVN
ISDNGGHYEQRFRYTCKARLPDPNLLEVGRQRIEMRYCSSDGTSGCSTDGLSGDFLRSGR
YSAHTINGAWSPWSPWSQCSRDCSRGIRNRKRVCSNPEPKYGGLPCLGPSLEYQECNILP
CPVDGGWSCWSSWSKCSATCGGGHYMRTRSCTNPAPAYGGDICLGLHTEEALCNTQPCPD
SWSEWSEWSECDSSGFQFRTRQCIILFPVGSQCTGNTTESRACALDSNFIPEISVARSSS
IEEKRCGAEFNMFHMIAVGLSSSILGCLLTLLVYTYCQRYQQQSHDATVIHPVSPAPLNT
SITNHINKLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTAKTYSNTYFTDFNNYDEY
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatgaacggaagctgcctccttgcaatgctgttggcaggacttggggtatta
ggaatactggagccaacaacaacagaagatacccactgccacagagctgagcacccagtt
attgcatacaaagaaattgccccttggttacatgtcttcagagcagaagatgctgtggac
ttctcacagttagcatttgacccaggacaaaaggagcttattgctggagcaagaaactac
ctcttcaggttgcagcttgaggatctctctctaatacaggcagtggaatggcaatgtgac
gaagctactaaaagagcctgttacagtaaaggcaaatcaaaggaggaatgccagaattac
attcgagtgcttcttgttggaggcaaccatctcttcacctgtggaaccaacgcgttcact
ccgatctgcaccaaccggacgttaagtaacttgacagagatccacgatcaaatcagtggc
atggctcgttgtccttacagtccccagcacaactccactgctcttcttactgccagtggg
gaattgtatgctgctacggccatggattttccaggaagggatcctgctatttatcgcagt
ctgggggcccttcctcctctccgcactgcccagtacaactccaagtggctgaatgagcca
aattttgtatcatcttatgacattgggaactttacctatttcttcttccgggagaatgca
gtggaacatgattgtggcaaaacagtcttctctcgtgctgcccgggtgtgcaaaaatgat
attggtggcaagttcgtgctggaggatacctggactacgttcatgaaagctcggctcaac
tgctctcgccctggagaaattccattttactataatgaactgcagagcactttcttcctg
cccgaactggacttgatctatgggatttttaccactaatgtgaacagcatagcagcctca
gcagtttgtgttttcaatctgagtgccataactcagacctttaatggacccttcaaatac
caggaaaactctcgctctgcttggcttccatatcccaatcctaaccctaattttcagtgt
ggcaccatggaccagggtttgtatgtaaatctgactgaaagaaatcttcaagatgctcaa
aaattcttcttaatgcatgaggttgttcaaccagttattccaattccttacttcatggaa
gacaacagccggttttcccatgtggttgtggatgttgtgcagggcaaggacatgcttttc
catatcatctatcttgccacagactatggcacaattaagaaagtactcgccccaatgaac
cagagttcaagcagctgcctgctcgaggaaattgaactcctgccaaaaactcagcgagaa
cccatcaggagccttcagattctgcacagccagagcgtcctttttgtgggcctgcaggaa
catgtgattaaggtccccctgaagagatgtcccttttacaaaacatacagtgcatgtatt
ggatcccaagacccttattgtggctgggacatggtgatgaagaaatgcacaacgctggaa
gaaagtctgagcatgagtcaatgggagcaaagcattacagtgtgtccaatgaggaatctg
acggtggatggacattttggaacatggtcacagtggaaaccttgcacccacacagacagt
gccagtgttggctcctgcctctgcaggacacgtgtgtgtgacagtcctgctccacagtgt
ggaggttggctgtgtgaaggaccaaccatggagattgccaactgttccagaaatggaggc
tggacaccatggacttcttggtcaccttgtagtaccacttgtggaataggctttcaagtt
cgtcagcgttcctgcagcaatccaacccctcgacatggaggacgggtctgtgtgggacag
aatcgtgaggagaggtactgcaatgagcatttgttgtgcccccctcatgtgttttggaca
ggctggggtccatgggagcgctgcactgctcagtgcggaggaggaatccaggcgcggcgt
aggacatgtgaaaatggtcctgactgtcctggctgcagtgtggaatatcagccttgtaac
accaatgcctgtccagagttaaaaaagacaactccttggacaccttggaccccagtcaat
atttcagacaacggtggacactatgaacaacgcttccgatacacctgcaaagcacgcttg
cctgacccaaatttgctagaggtgggaaggcaaaggattgaaatgcgttattgttccagc
gatggcaccagtggatgctcgacagatggattgtcaggggatttcttgcgttctggaaga
tactctgctcataccatcaatggtgcctggtcaccctggtctccgtggtctcagtgcagt
cgtgactgcagtagaggtatacggaatcgcaaacgggtctgcagcaatcctgagcccaag
tacgggggacttccttgccttggcccatctcttgagtaccaggaatgtaacattctgcct
tgtccagtggatggaggctggtcttgttggtcatcttggtcaaagtgctcagcaacttgt
ggaggaggccattacatgaggacccgctcctgtacaaacccagcaccggcctatggagga
gacatctgcctgggactgcacaccgaggaagcactctgcaacacacagccctgtccagac
agctggtccgagtggtctgagtggtccgagtgcgactcatctggcttccagttccgcacc
cgtcagtgcataattttgtttcctgtgggcagccagtgcacgggcaacaccacagagagc
cgagcctgtgctttggactccaactttatcccagaaatatcagtggcaagatccagcagc
atagaagaaaaacgatgtggcgcagaattcaacatgtttcacatgatcgcagtgggatta
agtagctcaatacttggttgccttcttaccctgcttgtttacacttattgccaacgatat
caacaacagtcccatgacgcgactgtcatccatccggtgtcaccagctcctctcaatacc
agcattaccaaccatatcaacaaactggacaaatatgattccgtagaagccatcaaggca
tttaacaaaaataacctgatcctggaggagagaaacaaatacttcaatccacatcttact
gcaaagacttattctaatacctattttacagatttcaataattatgatgagtactaa
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