Caloenas nicobarica (Nicobar pigeon): 135985366
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Entry
135985366 CDS
T11056
Symbol
ABCB5
Name
(RefSeq) ATP-binding cassette sub-family B member 5
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135985366 (ABCB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135985366 (ABCB5)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
135985366 (ABCB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
RsgA_GTPase
Rad17
AAA_28
AAA_5
G-alpha
AAA_25
CDC45
Motif
Other DBs
NCBI-GeneID:
135985366
NCBI-ProteinID:
XP_065484687
LinkDB
All DBs
Position
2:33644067..33679576
Genome browser
AA seq
1322 aa
AA seq
DB search
MKDYFENPTEKDLSDAESASKGYDNPSFQIDENLEESDRLKPKKNKKENEKIDKKAVGIF
ELFHYADWVDILLMVVGLIAAAASGTGLPIMIIFFGDMTNSFVLSGVKPNVLEGTSVNNT
SCPSIPSIDIEAEMTKFAYYYVGIGFAVLVLSMIQVWTFLIAATRQTARIRQKFFFAVLH
QEMAWFDTTQIGTLNTRLTDDINTIHEGIGDKICIFVQFFSTFLTGIIIGFIHGWKLTLV
ILSVSPLLAVSAAVWSTLLASFTAKELSAYAKAGAVAEEILTAIKTVVAFNGQQKALAKY
DANLEMARSVGVKKSITTNTSLGVSQFLIFGSYALAFWYGTKLTVEEKENYTIGNVLTVF
FSVIVGAFSLGQAAPNLESVAKARGAAYEVYQIIDKKRLIDSSSKEGYKPDKLIGEIEFR
NVHFSYPSRPDVKILRGLNLKVQAGKTIALIGASGCGKSTTVQLLQRFYDPVQGEITLDG
QDIRTLNVKWLRENIGIVSQEPVLFATTIAENIRYGREDISDVEIEQAAKEANAFDFISK
LPDKFNTMVGERGAQLSGGQKQRIAIARALAKNPKILLLDEATSALDTQSESIVQAALDK
ARTGRTTIVIAHRLSTIRTADTIAGFEKGVMVEQGTHSELMLQKGLYYSLVTQQSCSNNV
EDGETSEETEDAEAEEYEENNMNDLVEELTLQDHFEESVIPGKGSIRRRSSRYKSKRCSS
KKKPSRKKEKKELEEENLPAVPYSRILALNKPEWLYVLLGVIAAAISGGVHPAFAVIFGK
IIGAFQEIDPEKRSKNTLVLSLMFLLLGVITLAAYIAQGFMFGKSGELLTMRLRSLSFRA
LLQQDIGWYDDQKNAVGVLLTRLATDASQVKGATGSRLGLMTMTVCTLLTAIIIAFIYGW
QLTLLILACIPFIIAANAASVSAVSGHAAKDQKALEEAGRISTESVENIRTVASLAKEEL
FFERYVTSLNGPYRDSLTKAPLYGFTYGVAQSANYFLNAAVFRFGAWLIARCLTNFENVF
IVFSSIIFAAMNVGQSASLAPDYGKSKISAQRIFKLLDRKPIIDSYSEEGEKLSNFEGNI
EFRNIHFVYPARPEVQVLQGLNVKVNKGQTLALVGGSGCGKSTSIQLLERFYDPVEGQVL
ADGFDTRSLHLQWLRSRFGLVSQEPILFDCSIAENIRYGDNSRVVSQEEVEKAAKAANIH
SFIEKLPEKYNTQVGEKGTQLSGGQKQRIAIARALVRNPAVLLLDEATSALDTESEKIVQ
KALDNARQGRTCIVIAHRLTTIQTADIIAVIQNGRVVEQGTHSQLLAKEGQYYALVNAQV
SN
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactattttgaaaatcctacagaaaaggacctctccgatgctgaatctgcaagc
aagggatacgacaacccttctttccaaatcgatgaaaatcttgaagaaagtgaccggtta
aagcccaagaaaaataagaaggaaaatgagaagatagacaagaaggcggttggcattttt
gaactgttccactatgctgattgggtggacatccttttgatggtggttggtttgattgca
gctgctgcaagtggtactggattgccgattatgataattttctttggagatatgacaaac
agctttgtgctaagtggtgtgaaaccaaatgtgttagaaggtacttcagtaaataatacc
agctgtccatcaattccaagcatagatatagaagctgaaatgaccaaatttgcttactac
tacgtgggaattggatttgctgtgttggtcctgagcatgatccaagtgtggacgtttttg
attgctgctacgaggcagacagccaggatccggcagaagttcttttttgcagtcctccat
caggagatggcttggtttgatactacccagataggaaccctgaacaccagactgacagat
gacatcaacaccatccacgaaggcatcggagacaagatctgtatatttgtacagtttttt
tccacatttctgacagggattattataggattcatccacgggtggaagctgacgctggtg
attttgtcagtcagccctctgcttgctgtgtcagcagcggtttggtcaactctcctggca
tcctttactgccaaagagctgtctgcttatgccaaagctggagctgtggcagaagaaatt
ttgacagcgatcaagactgtcgtggctttcaatggacagcagaaagcattagcaaaatat
gatgctaacttagagatggctagaagtgttggagtgaaaaagtccattaccaccaataca
tctctgggtgtttcacaatttcttatctttggatcctatgcacttgcattttggtatgga
actaagctcactgtcgaggagaaagaaaattataccatcggcaacgtgttaactgtgttc
ttctctgtgattgtcggagccttctccctaggccaggcagctcccaacctggagagtgtg
gctaaagcacgtggggctgcctatgaagtgtatcagattattgacaagaaacggcttata
gatagcagttctaaggaaggctacaaaccagacaagctcataggagaaattgaattcaga
aacgtccatttcagttacccatccagacctgatgttaaaatcctcagaggtctaaatttg
aaagttcaagctgggaagaccattgctttaattggtgccagcggctgcggaaaaagcact
actgttcagttgctgcagagattctatgatcctgtccagggagaaattaccttagatggt
caggatattcggacgcttaatgtaaagtggctacgagaaaatattggtattgtgagccag
gagcctgttttgtttgcaacaacaatagccgaaaacattcgctatggccgagaagatatt
tctgatgttgaaattgagcaagcagccaaggaagccaatgcttttgactttatatctaaa
ctgcctgataaatttaacacaatggtaggggaaaggggggctcagctgagtggcggacag
aagcagcgaatagctattgcccgtgccctggcaaaaaatcccaagattcttcttctggat
gaagctacatctgcactagatactcagagtgaatccatagtgcaagcagctcttgacaag
gctcggactggccgtacgactattgtgattgctcacagactgtctaccatcaggactgcc
gacactattgctggatttgagaaaggtgtcatggttgaacaaggaacacacagtgaactc
atgttgcagaagggactctactattctctcgtaacgcagcagagttgtagcaataatgtg
gaagatggtgagacatcagaagaaactgaagacgcagaggctgaggaatatgaggaaaat
aacatgaatgatcttgtggaggagctgacccttcaagatcattttgaagaatcggtgatc
cctggaaaaggcagcattcgaagaagatccagcagatacaagagcaagaggtgctcttct
aagaaaaagccctctagaaaaaaggaaaaaaaagagctggaggaagaaaatctccctgct
gtgccttactcaagaatcctggctctgaacaagcctgagtggctgtatgtactgctggga
gtgattgctgctgccatctcaggtggggtccaccctgcatttgctgttatatttggaaaa
atcattggggcttttcaagaaatagatccagaaaagaggagtaaaaacactttggtgctt
tctttaatgtttcttttacttggagtgattaccttagcagcatacatagcccagggattc
atgtttgggaagtccggggaattactaacaatgagacttcgctctttgtccttcagagca
ttacttcagcaggatattggatggtatgatgatcagaaaaatgctgttggtgttctgcta
actcggcttgccacagatgcttcccaagtcaaaggggcaactggaagtcgacttggactg
atgactatgactgtctgtacccttctgactgccatcattattgctttcatatacggctgg
cagttgactttgcttatcctggcctgcattcctttcattattgctgcaaatgctgcaagt
gttagcgctgtgtctggtcatgccgccaaggatcaaaaagctttggaagaagctggaaga
atttcaacagaatcagttgaaaacataagaactgtagcttcgctggccaaggaagaatta
ttttttgaaagatatgttacaagtttgaatggtccatatagagattctctgacaaaagct
cctttatatggatttacctacggagtagctcagagtgcaaactactttcttaatgcagca
gtcttcagatttggggcatggctcattgcccgttgtctgaccaactttgaaaatgtattt
atagtcttctcttccatcatatttgcagctatgaatgttggtcaatctgcttccctagca
ccagattatggcaagtctaaaatttcagctcaaagaatctttaaacttttggacagaaaa
cctataattgacagttacagcgaagaaggtgaaaaattgagcaatttcgaaggcaacatt
gaattcagaaacatccattttgtatatccagcaaggccagaagttcaggttttgcaagga
ctcaacgtgaaggttaacaaaggacagactctggcgttagtaggaggcagtggctgtggc
aaaagcacgtccattcagctcttggagagattttacgacccagtggaaggacaagtgtta
gcagatggatttgataccagatctttgcatttacaatggctgaggtccagatttggcctg
gtgtcacaggagcccattttgtttgactgcagcattgctgaaaatattcgctatggagac
aacagtagggtggttagtcaggaggaagttgaaaaagcagctaaagcagctaacattcat
tccttcattgaaaaactgccagagaaatataatacccaagtgggtgagaaaggaacacaa
ctttctggaggtcaaaaacaaagaatagcaattgcccgtgctctggttcgtaatcctgcc
gttctgcttcttgatgaagctacttctgctcttgacacagaaagtgaaaagatcgtccag
aaagctctggataacgcccggcaaggtcgaacctgcatcgtcattgctcaccgcctgacg
accatacagactgcagacatcattgcggtgatccagaacggcagggtggttgagcagggc
acccacagccagttactggcaaaggaaggacaatactatgcccttgtaaatgcacaagtc
tctaattag
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