Caloenas nicobarica (Nicobar pigeon): 135985374
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Entry
135985374 CDS
T11056
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135985374 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnic01002
]
135985374 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135985374 (TAF2)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135985374 (TAF2)
Peptidases and inhibitors [BR:
cnic01002
]
Metallo peptidases
Family M1
135985374 (TAF2)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135985374 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
135985374 (TAF2)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135985374 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
Motif
Other DBs
NCBI-GeneID:
135985374
NCBI-ProteinID:
XP_065484705
LinkDB
All DBs
Position
2:complement(151214043..151275558)
Genome browser
AA seq
1200 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPNMEGSMAERGAHVFSCGYQNSTRFWF
PCVDSHSELCTWKLEYTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFID
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKQELDQIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALE
KFPTPASRLALTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
TCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLKAIRVLQKNGHVPSDPALFKSYAEYGHFIDVRIAALEAVVDYTKVDRSYEELQWL
LTMVQNDPVPYIRHKILDMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVANNQEPVNSTNNHGQS
VGFQNTEDDHLIKETASSISGHQQGVKRKADMPLGSPLEPGQILEKNEDSKVKLKIRFSN
SQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSGEMNVHPVSAAPLSVFSKESNS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDNKEKEKDPFAFSNSPASARSIRSPSLSD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaagaaaggagacaaaggatttgagagcccaagaccatataaattaactcac
caggtagtttgtatcaacaacataaattttcagagaaagtctgttgtaggctatgtggag
ctgacaatatttcccacagttgcaaacctgaatagaatcaaactgaacagtaaacagtgc
cggatttacagagtgagagtcaatgatttagaagcagctttcatctataatgatccaacg
ctggaggtttgtcaccacgagtccaagcagaggaatctcaactatttttccaatgcctat
gctgccgcagtcagtgccgtggacccagatgctggaaatggagaactctgcattaaggtt
ccctcggagttgtggaaacatgttgatgaattaaaagtcctgaaagtgcatataaacttt
tctctggaccagccaaaaggaggccttcattttgtggtacccaacatggagggcagcatg
gcagaaagaggggctcatgtcttttcatgtggttatcaaaattctacaagattttggttt
ccttgtgttgattctcattctgagctgtgtacctggaaacttgagtatactgtggatgct
gcaatggtggctgtttcaaatggagatttggtggaaactgtatatacccatgatatgaga
aagaagacttttcattacatgctcactattccaactgcagcttctaacatctccttggca
ataggaccttttgaaatccttgttgatccatacatgcatgaggtgactcacttttgcttg
ccacaacttctcccattgctcaaacataccacgtcataccttcatgaggtgtttgaattt
tatgaggagattcttacctgccgctatccatactcttgctttaagactgtttttatagat
gaagcttatgtcgaagtagctgcttatgcatccatgagtattttcagcacaaatctctta
cacagcgcaatgattatagatgaaactccactgaccaggaggtgcttagcacaggctctg
gcccagcagttctttggatgttttatatccagaatgtcctggtcagatgaatgggtgcta
aagggaatctctggttatatttatggcctttggatgaaaaaaacctttggtgttaatgag
tatcgccactggattaaacaggagttagatcaaatagtggcatatgaactgaagactggt
ggagttttactgcatccaatatttggaggaggaaaagagaaagacaaccctgcatcacat
ttacatttctctatcaaacaccctcatacactgtcctgggagtattacactatgttccag
tgtaaagcacatcttgttatgagactgattgagaacaggattagcatggagttcatgtta
caggttttcaacaagttgttgagtctggccagcactgcttcatctcagaagttccagtca
cacatgtggagtcagatgttggtttccacatctgggtttttgaaatctatctcaaatgtc
tctggcaaagacattcaacctttaataaagcagtgggtggatcagagtggcgtggtaaaa
ttttatggtagctttgcatttaatagaaaacggaatgtattggaattggaaataaaacaa
gactacacgtctcctgggactcagaaatacgtgggtcctcttaaagtgacagtgcaagaa
cttgatggatcattcaaccatacattgcagattgaagagaacagtcttaaacatgatata
ccttgccattctaaaagcagaagaaataagaagaaaaagatcccactgatgaatggagaa
gaggtggacatggacctttctgccatggatgctgattctcctttgctctggataagaata
gaccccgatatgtcagtactgaggaaggtagaatttgaacaatctgatttcatgtggcag
taccagcttcgatatgagagagatgtggttgcacaagaagaagccattctggcgctggaa
aagttccctactccagcatcacggcttgcgctgaccgatatactggaacaggagcagtgt
ttctaccgagtgcggatgctggcttgcttctgcctggcaaagattgcaaattccatggta
agtacatggacaggaccaccagccatgaaatcactctttacccgaatgttttgttgtaag
acttgtccaaacattgtgaagaccaacaacttcatgaattttcaaagctactttctgcaa
aagactatgcctgttgccatggcccttctgagagatgttcacaacctctgtcctaaggag
gttttaatgtttattttggatttgatcaagtataacgataacaggaagaataagttttca
gacaactactatcgtgctgagctgattgatgccctagccaactctgtaactcctgcagtc
agtgtgaacaatgaagttcgaacattggataacttaaatcctgatgttcgacttattctt
gaggaaattacccgtttcctaaatatggagaagcttcttcccagttacaggcataccatt
acagtcagctgtttaaaagcgattcgagtgcttcagaagaatggtcatgtcccaagtgat
cctgctctcttcaagtcatatgcagaatatgggcacttcatagatgtccggatagcagca
ttggaggctgttgttgattacacaaaagttgataggagctatgaagaactacagtggctg
cttactatggttcagaatgatcctgtaccctacataaggcacaagattctggatatgctg
actaagaatccaccgtttaccaagaacatggagtcccctttatgtaacgaagctttggta
gatcagctttggaaactgatgaattcaggaacttcacatgactggagattacgatgtggt
gctgtggacctctacttcacactttttggcctcagcagaccgtcttgtttaccattgcca
gagcttggacttgttcttaatctgaaagaaaagaaggctgtacttaatccaacgattatc
cctgaatcagttgcaaataatcaggaacctgtgaacagtactaacaatcacggacagtca
gtaggatttcagaacaccgaggatgatcatcttattaaggaaacagcatccagcatttct
ggtcatcagcagggggtgaagaggaaggctgatatgccactcgggtctccattggagcca
gggcaaatactagagaagaatgaagacagtaaagtcaaactcaaaatcagattctcaaac
tctcaagaagaagaggaaattgatatggacacagttcatgacagtcaagcctttatttac
catcacttaaatatgttggagagaccatccacaccaggtaaagaacaatcttcaggagag
atgaacgtgcaccctgtctcagcagctccgctctctgtgtttagtaaagaatcaaactcc
tcaaaacacagtgaccaccatcaccatcaccaccacgagcacaagaaaaagaagaagaaa
cacaagcataagcataagcataaacataaacatgataataaagaaaaggaaaaggatccc
tttgctttctccaacagcccagccagtgcacgatcgatccgttccccgtcgctttcagac
tga
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integrated database retrieval system
