Caloenas nicobarica (Nicobar pigeon): 135985427
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Entry
135985427 CDS
T11056
Symbol
NFX1
Name
(RefSeq) transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135985427 (NFX1)
04121 Ubiquitin system [BR:
cnic04121
]
135985427 (NFX1)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
135985427 (NFX1)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
135985427 (NFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
135985427
NCBI-ProteinID:
XP_065484818
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Position
2:63599177..63661489
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AA seq
1134 aa
AA seq
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MAEARPGAGALNFNPDAADSVPGERQPTDISWVNKDRKDSNQDRSNLPFPGLSSERATDY
ESSSTKHYGLCNPESQYGNSEDFHQYFGSSKSLKNRNLQSQRWHRSRNDSTCTRSKIRQS
AADAAAGAGIPDTAIVPGRRAPPKGYNDFLSSESDREAPNADSKGAKPKKTHLMHASGRG
FREKGKQVHDREKRVSSKQKAELFENVPSLDLTQSDSSESSVGKAFCDAPIGGGDEQKGY
NYVNKRYPRKPVWNKPPADKECQKRHDSHRSKNTKVGKKSSLVYTPKDKNQRKKELSVHK
NDENLTSEIRHQLSDSVRCNGRKFLLKGDQAPTLHFSWTQYWKKQSDVPKNKETHTGSLI
EQLTTEKYECMVCCEVVRIVAPVWSCQNCYHVFHLNCIKKWARSPASQAEDGNSGWRCPA
CQNASMQVPKIYTCFCGKVHNPEWNRNEIPHSCGELCGKKRQCLDCPHLCNILCHPGPCP
SCPAFVTKTCECGQTSHSVRCGQSTKIHCSNVCGNTLNCGKHSCTQVCHAGKCSPCQLTV
QQVCYCGSNFKEVLCGTKEEFSDGFGNFSCQNICGKKLNCGRHNCTQICHPQPCQLCPRL
PQVVHRCPCGQTPLSKLLELGCVERKVCTDPIPSCGKTCGKPLSCGSYEFVHTCESLCHE
GDCRPCSHTSNIYCRCGFKKKEVPCALLRNKAAITFMCDKRCNKKRSCGRHKCNEVCCVD
TEHKCSLVCGRKLNCGLHRCEEPCHRGSCQTCWQTSFEELTCYCGESVIYPPVPCGTQPP
ECKKTCTRPHDCDHPVYHSCHSEEKCPPCTYLTQKWCMGKHELRSNIPCHLTDISCGLRC
NQMLKCGMHKCKRICHKGECLIDEECKQPCTIPRLYCNHPCMAPCHPSSPCPTTSCSAKV
DLQCECGRRKESMICSEASNTYQRIAAISIATKLTDLQLGDSVEISRLITKKEMKQARLQ
CDEECLALQRNRRLAEALEIDHNSDPFNIRSSGPKYSDLLKEDARKDLKFVSDIEKEMRM
LVEAVNKGKHTKKSHCYPPMNRDHRRIIHELAQVYGIESVSYDNEPKRNVVITAVKGKSI
CPSNTLTSVLDKELQSRPPPPIPHYKQTDRGSGNSGLSKPLKEEPVIDYFDVQD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcggccgggcgcaggtgcattgaacttcaatcctgatgccgctgattcc
gttccaggagaaagacagcccacagatataagctgggtaaataaagataggaaagactct
aatcaggatagaagtaatttaccgtttcctggtctgtcttctgaaagagctacagattat
gaaagctcgtccacaaagcattatggcctctgtaatccagaaagtcagtatgggaattct
gaagacttccaccagtattttggtagcagtaaaagtttgaagaatcgcaacttgcaaagc
cagagatggcacagatcaagaaatgatagcacatgtactagaagtaagataaggcaaagt
gctgcagatgctgctgcaggtgcaggaattccagatactgcaatagtacctgggagaaga
gcacctcccaaaggatacaatgactttctgtcctcagagagtgacagggaggcacctaat
gcagatagcaaaggagcaaagccaaagaaaacacatctgatgcatgcatctggaagaggt
ttcagggagaagggaaagcaagtacatgaccgggaaaagagagtgagctctaaacaaaaa
gcagagctctttgaaaatgttccatctttggatttgactcagtctgactcttcagaatca
tctgttggaaaggcattctgtgatgcacctattggtggtggggatgagcagaaaggctac
aattatgtaaacaaaagatatcctaggaagcctgtgtggaataaaccgccggcagacaaa
gagtgtcagaaaagacatgattctcaccggagtaaaaatacaaaagtaggtaagaagtcg
tctcttgtgtatactccaaaagataaaaatcagaggaagaaagaactctctgttcacaaa
aatgatgaaaacttgaccagtgaaattaggcatcagttgtctgattctgtcagatgtaat
ggaagaaagttcctgctaaagggggatcaggcacccacacttcatttcagctggacccag
tactggaaaaagcaaagtgatgtaccaaaaaacaaagaaactcatacagggtcattgatt
gaacagctgaccacagagaagtacgaatgcatggtatgctgtgaagtggtccgaatagta
gccccagtgtggagctgtcagaattgttaccatgtgttccacctgaattgcattaagaag
tgggcacgatcaccagcttcacaagctgaagatggtaatagtggttggagatgtccagct
tgtcagaatgcttctatgcaagttcccaaaatttacacttgtttctgtggtaaggtgcac
aatcctgaatggaatagaaatgaaatcccacatagctgtggggaactttgtggaaagaag
agacagtgtttggactgtccccatctttgtaacatcctgtgccatccaggaccttgccct
tcatgcccagcctttgtgacaaaaacatgtgaatgtggacaaacaagtcattcagttcgc
tgtggccaatcaacaaaaattcattgttctaatgtatgtggaaatactttaaactgtggt
aagcacagctgtactcaagtgtgccatgcaggaaaatgttcaccttgccaattaacagta
cagcaagtgtgttactgtggaagcaactttaaagaagtgttgtgtgggacaaaggaagaa
ttctctgatggatttgggaatttctcatgtcagaatatatgtggcaaaaaattaaactgt
gggaggcacaactgtacacaaatatgccatcctcagccttgccagctctgtccacgactt
ccacaagtagtacatcgctgtccctgtggtcagactcctctcagcaagttactggaacta
ggatgtgttgaacgtaaagtatgcacagaccctattccatcatgtggaaaaacatgtggc
aagcctctctcctgtggtagctacgagtttgttcatacatgtgaaagcctttgccatgaa
ggagactgtagaccatgttctcacacatcaaatatttattgtaggtgtggcttcaaaaaa
aaagaagtcccatgtgctctcctcagaaataaagctgctattacatttatgtgtgacaag
agatgcaacaagaaaagatcatgtggacgacacaagtgtaatgaagtttgctgtgtggac
acagaacataagtgttctttggtttgtggtcgtaaactcaactgtgggcttcatagatgt
gaagaaccctgtcatcggggcagttgtcaaacatgctggcaaacaagttttgaggagtta
acttgttattgtggtgaatctgtgatttacccccctgtcccctgtggcactcagccacca
gagtgtaaaaaaacatgcaccaggccacatgactgtgatcatccggtgtaccattcatgt
cacagtgaggagaaatgtccaccctgtacctatctcactcagaaatggtgtatgggcaag
catgaactgcgaagtaatattccttgtcatctcactgacatttcctgcggacttcgctgc
aatcaaatgttaaaatgtggaatgcacaaatgtaaaagaatctgtcataaaggagaatgt
cttatagatgaagagtgtaaacagccatgtactattccaaggctatattgtaatcatccc
tgtatggctccatgtcatccttcttcaccctgtccaacaacatcctgctctgcaaaggtt
gatcttcagtgtgagtgtggaagaagaaaggagagtatgatttgctcggaagcatctaat
acatatcaaagaatagctgctatatctatagccactaagctaacagatttacagcttggg
gattcagtggaaatcagtaggcttattacgaaaaaggaaatgaagcaggccaggttacaa
tgtgatgaagaatgcttagctcttcagaggaacaggcgtcttgctgaggctcttgaaata
gatcataattctgatccttttaacatccgttcttctggaccaaagtacagtgacctttta
aaagaagatgcaaggaaggatttaaaatttgtcagtgacattgagaaggaaatgcgaatg
cttgtggaagctgtgaataagggcaagcatacaaagaagagccattgttacccaccaatg
aacagagatcaccgcagaatcatccatgaattagctcaggtttatggcattgaaagtgtg
agctatgacaacgaaccaaagcgtaatgttgttatcactgcagtgaaagggaaatccatt
tgtccaagcaataccttaacttctgtgctagataaagaattgcagagcaggcctccacct
cctattcctcattacaaacaaacagatagaggtagtggaaacagtggtttgtccaaacca
ttaaaagaagagccggtaattgactactttgatgtccaggactga
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