Caloenas nicobarica (Nicobar pigeon): 135985442
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Entry
135985442 CDS
T11056
Symbol
RAB5A
Name
(RefSeq) ras-related protein Rab-5A
KO
K07887
Ras-related protein Rab-5A
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04137
Mitophagy - animal
cnic04144
Endocytosis
cnic04145
Phagosome
cnic04148
Efferocytosis
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135985442 (RAB5A)
04145 Phagosome
135985442 (RAB5A)
04137 Mitophagy - animal
135985442 (RAB5A)
04148 Efferocytosis
135985442 (RAB5A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135985442 (RAB5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135985442 (RAB5A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135985442 (RAB5A)
04031 GTP-binding proteins [BR:
cnic04031
]
135985442 (RAB5A)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
135985442 (RAB5A)
Endosome - Lysosome transport
135985442 (RAB5A)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135985442 (RAB5A)
Exosomal proteins of other body fluids (saliva and urine)
135985442 (RAB5A)
Exosomal proteins of colorectal cancer cells
135985442 (RAB5A)
Exosomal proteins of bladder cancer cells
135985442 (RAB5A)
GTP-binding proteins [BR:
cnic04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
135985442 (RAB5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
MCR_beta
AAA_16
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
135985442
NCBI-ProteinID:
XP_065484850
LinkDB
All DBs
Position
2:39800966..39819728
Genome browser
AA seq
215 aa
AA seq
DB search
MANRGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
QASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKK
LPKSEPQNAGVNSARGRGVDLTEPTQPPKSQCCSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcgaggagcaacaagacccaatgggccaaatgctggaaataaaatttgccag
ttcaaactagtacttttaggagagtctgcagttggcaaatcaagtttggtgcttcgtttt
gtaaaaggacagtttcatgagtttcaagaaagtacaattggagctgcttttctaacccag
actgtatgtcttgacgatacaacggtaaaatttgagatttgggatacagctgggcaagag
cggtaccacagtttagcacccatgtactacagaggagcacaagcagctatagtggtatat
gatattacaaatgaggagtcgtttgccagagcgaaaaattgggtcaaagaacttcagcga
caagcaagtcctaacattgtaatagctttagcaggaaacaaagctgatctagctaacaaa
agagctgtggatttccaggaagcacaggcttatgcagatgataacagcttattgttcatg
gagacgtctgccaaaacatctatgaacgtaaatgaaatattcatggcaattgcaaaaaaa
ttgcccaagagtgaaccacagaatgcaggagtcaactctgccagaggaagaggagtagac
cttactgaacccacgcaaccacccaagagtcaatgttgtagtaactaa
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