KEGG   Caloenas nicobarica (Nicobar pigeon): 135985568
Entry
135985568         CDS       T11056                                 
Symbol
PPP4R1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
  KO
K15424  serine/threonine-protein phosphatase 4 regulatory subunit 1
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cnic01009]
    135985568 (PPP4R1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnic03400]
    135985568 (PPP4R1)
Protein phosphatases and associated proteins [BR:cnic01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     135985568 (PPP4R1)
DNA repair and recombination proteins [BR:cnic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     135985568 (PPP4R1)
SSDB
Motif
Pfam: HEAT HEAT_2 HEAT_EF3_N TOR1L1_N WRNPLPNID Cnd1 Htt_N-HEAT_1
Other DBs
NCBI-GeneID: 135985568
NCBI-ProteinID: XP_065485100
LinkDB
Position
2:111138221..111206395
AA seq 962 aa
MTRSRARVGQAGLRRAFPRGSGGGSSSAQRVGVDDYSSESDVIIIPSALDFVSQDEMLTP
LGRLDKYAASENIFNRQMVARSLLDTLKEVSDDERDCIAVLERISRLADDSEPTVRAELM
EQVPHIAMFCQENRPSIPYAFSKYLLPIVVRYLADQNNQVRKTSQAALLVLLEQELIERY
DVETKVCPVLIDLTAPDSNDDVKTEAVAIMCKMASMVGKDITERLVLPRFCEMCCDCRMF
HVRKVCAANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATSQEV
RRTKLSTLFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEEDGKNPEDCGSAQ
ENSQNVRTTEDVTTEDEHNRTEDLSSHVDNDDFATKLENAMEDQNTVSNNSQRESDFQTE
SSFHCTLSSESCGEMADENEQSSHCCTAGLREAGLNSQETSLPEQELYNSFNFWRTPLPE
IDIDFELQQTSEIILDREIQELTMPVSPNIPMARRKELEEMIENLEPHIDDPDVKAQVEV
LSAALRASSLDPQEETMASVGKGTDSQTELTISDQQNFKPILGDIVPLIGDTVENMDSTL
HYIHNDSDLSTNSSFSPEEERKSKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYS
LPGVALTLGRQNWHCLKDTYETLASDMQWKVRRTLAFSIHELAVILGDQLTAGDLVPVFN
GFLKDLDEVRIGVLKHLHDFLKLLHLDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLIL
LLDLYSARDIYDYLRPIAFSLCADKVSSVRWISYKLVSEMVKKLYMASTSTFVVNLMNEL
VEKFCKCRKWSGRQTFVFICQTISEDDCLPMDQFAVHLLPHLLHLASDRVPNVRVLLAKT
LKQTLLEKEYFLNSANSHQEAVEQTIMALQMDDDSDVKYFASIHPASTKIADDAMSTASS
TY
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgacgcgcagccgggcgcgcgtggggcaggccgggctccgccgggctttcccgcggggg
agcggcggcggcagcagcagcgcgcagcgggttggtgtggatgactacagctcagagtct
gatgtgattattataccttcagccctggactttgtctcacaagatgaaatgttgacgcct
ttgggaagactggacaagtacgctgcaagtgagaacatatttaacaggcaaatggtggct
cgaagtttgctggacactttgaaggaagtcagtgatgatgagagagattgtattgctgtg
ttggagagaatcagcagattagctgatgattcagagccaacagtgcgggcagaactgatg
gaacaggtgcctcatattgctatgttctgtcaagaaaacagaccttcaattccatatgct
ttttccaaatacttactgcctattgtggtacgataccttgcagaccagaataaccaggta
agaaaaacaagccaggcagcattgttagttctgttggagcaagaacttatagagagatat
gatgtggagaccaaagtatgccctgttctgatagatctgacagctccagacagcaatgac
gatgtgaagacagaagcagtggctataatgtgcaaaatggcctccatggtgggaaaggac
atcacggaaagacttgttcttcccaggttttgtgagatgtgctgtgactgcagaatgttt
catgttcgtaaggtatgtgcagccaattttggagatatctgcagtgtggttgggcagcaa
gccactgaagaaatgctgctgccgaggtttttccagctctgctctgataatgtgtgggga
gttaggaaagcttgtgctgaatgcttcatggcagtttcttgtgcaacatcacaggaagtc
cggaggacaaaattatcaaccctttttattaatttgattagtgatccttcacgatgggtc
cgccaagctgcttttcagtcactggggccttttatatcaacttttgctaatccatccagc
agtggccagtactttaaagaagaagatggtaaaaacccagaagattgtggttctgcacag
gagaacagtcaaaatgtcaggactacagaagatgtcacaacagaggatgagcacaacagg
acagaggatctgtcttcacatgttgataatgatgattttgcaacaaaacttgaaaatgcc
atggaagatcaaaatacagtgtcaaataactcccagagggaaagtgatttccagactgag
tcatccttccattgcactttgtcttcagaatcttgtggggaaatggctgatgagaatgag
caaagttctcattgctgtacagcaggtctacgggaggctgggctgaattcacaggaaacc
tctcttccagagcaggaactgtacaactctttcaatttctggaggactccacttcctgaa
atagatattgacttcgagcttcagcagacttctgagataatacttgatagagaaattcag
gaactcactatgccagtatccccaaacattcctatggcaagaaggaaagaattggaagaa
atgatagaaaatttggaaccccatatagacgatccagatgttaaagcacaagtggaagtg
ttgtctgctgcactcagagcatccagtttggatcctcaagaagagacaatggccagtgtt
ggcaagggaacagactcacagactgaactaaccatcagtgaccaacaaaattttaaacct
atactgggtgatattgtgcctttaattggtgacactgtggagaatatggattctacactt
cactatattcataatgattcagatttaagcaccaacagtagtttcagccctgaagaagaa
agaaaatccaaagtacaggatgttgtacctcaagccttgctggatcagtatttatcaatg
actgatccatctcgtgcacaaacggttgatactgagattgccaaacactgtgcctacagc
ctgccaggtgtggcacttacattaggcagacagaattggcactgtttgaaagacacctat
gagacgctggcatctgacatgcagtggaaggttcggcggacactagcgttttctatacat
gaacttgctgtcatccttggagaccagcttacagctggagatttagttcctgtcttcaat
ggctttttaaaagatctagatgaagtcaggataggtgtgcttaaacacttgcatgatttt
ctgaagcttcttcatcttgacaaaagacgagagtatctttatcagctccaggaattccta
gtgactgataacagcaggaactggcgtttccgtgcagagctggctgagcaactgatcttg
cttctagatctgtacagtgccagagacatttatgactacttgcgacctatagctttcagc
ctctgtgcagacaaagtgtcttctgtccgttggatttcttacaagctggttagtgaaatg
gttaaaaagctgtacatggcttcaacatcaacctttgtggtaaacctcatgaatgaactt
gttgaaaagttctgtaaatgccgcaaatggtctggtcggcaaacttttgtctttatttgc
cagactatcagcgaagatgactgcctgcccatggaccagtttgctgtgcatctgttgcca
cacttgttacacttggcatctgacagggttccaaatgttcgagtcctgcttgcaaaaacg
ttaaagcaaactcttttagagaaagaatattttctaaattctgccaactctcatcaagaa
gccgtggagcaaacaattatggcgcttcaaatggatgatgacagtgatgtcaaatatttt
gcaagcatacaccctgccagtaccaaaattgcagatgatgccatgagtactgcttcatca
acttattaa

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