Caloenas nicobarica (Nicobar pigeon): 135985675
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Entry
135985675 CDS
T11056
Symbol
TRAPPC9
Name
(RefSeq) trafficking protein particle complex subunit 9 isoform X1
KO
K20306
trafficking protein particle complex subunit 9
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135985675 (TRAPPC9)
Membrane trafficking [BR:
cnic04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
135985675 (TRAPPC9)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Vps23_core
Motif
Other DBs
NCBI-GeneID:
135985675
NCBI-ProteinID:
XP_065485294
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Position
2:complement(160176516..160662612)
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AA seq
1159 aa
AA seq
DB search
MSVPDYMQCAEDHQTLLVVVQPIGIVPEESFFRIYKRISAVSQVNVRDSQRVLYIRYRHH
YPPENNEWGDFQTHRKVVGLITITDCSSAKDWPQTFEKFHLQKEMYGSTLYDSRLFVFGL
QGEIAEQPRTDVAFYPSYDECETVEKRIEDFIESLFIVLESKRLDRATDKSGDKIPLLCV
PFEKKDFVGLDTDSSLLLGLKRHYKKRCQGRMRKHVGDLCLQAGMLQDSLVHYHMAVELL
RSVNDFLWLGAALEGLCSASVIYHYPGGTGGKVGSRRAQGGSLSAEAGNRHRPGAQEVLI
DPGALTSNGINADTSAEIGRAKNCLSPEDIIDKYKEAISYYGKYKNAGVIELEACVKAVR
VLAIQKRSMEASEFLQNAVYINLRQLSEEEKIQRYSILSELYERIGFHRKSAFFKRIAAM
QCAAPSIPEPGWRACYKLLLETLPGYSLSLDPKDFSKGTHRGWAAVQMRLLHELVYASRR
MGNPALCVRHLSFLLQTMLDFLSDQEKKDVTQSLESYTAKCPGTMEFITFPDGLKLPPVP
FTKLPIVRSVKLLNLPTSLRPHKMKSLLGQNVSTKSPFIYSPIIAHSRGEERNKKIDFQW
VQGDVCEVQLMVYNPMPFELRVENMGLLTTGVEFESLPAALSLPAESGLYPVTLVGVPQT
TGQITVNGYHTSVFGVYSDCLLDNLPGVKTNGCTVEVIPALPRLQISTSLPRSAHTLQPS
SGDEISTNVSVQLYNGETQQLIIKLENIGTEPLEKLEVTVKTVNTKEKLYGDFLSWKLED
TLSQFPLKPGKIATFTVNIKVKLDFSCQENLLQDLSDDGISVTGLPLSSPFRQVVKPRVE
TKPINPQESSKVGDFSHVKMLEAILNFKYSGGPGHVEGYYRNLSLGLHVEVEPSVFFTRV
STLPATSTRQCHLLLDVFNSTEHELTISARNNEDLILHAGECQRMAIQVDKFSFESFPES
PADGTQFANAKQLEEERQQAKGLEINSKLDICWKIPSLKREGEASVEGVLNQLVLEHLQL
APLQWDILVDGKLCDCDIVVDCKVGDPIPLEVKLTNWSKHSVGPFALTVTPYQDYQNGVH
NYELQDAITFVGSNTFYIDSVKPTKDSVYFGALLFLYTGDFYLNIKFHEDNCSKELPLSW
FCLPSVHIRAMEPMVQTKL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcctgactacatgcagtgtgctgaggaccatcagactctcctggtcgtggtt
cagccgatcggcattgtacccgaagagagcttcttcaggatctacaaacgaatttcagca
gtgagtcaagttaatgtgcgcgactctcagcgtgtgctgtatatccgctataggcaccat
tatcccccggagaacaacgaatggggggattttcagacacaccgcaaagttgtggggctg
ataactatcacggactgttcttccgcgaaggactggccgcagacttttgaaaaattccac
ctgcagaaggaaatgtatggttctactctctacgattcccggttatttgtctttgggctt
caaggagagatcgcggagcagccccgcactgatgtggcattttatcccagttacgatgaa
tgtgaaaccgtggagaagagaatagaagattttattgaatccctcttcatagtgttggag
tctaagcggcttgacagagccactgataagtctggagacaagatcccgctgctctgtgtt
ccctttgagaagaaggattttgtaggtctggacactgacagtagtttgttgttgggtcta
aaaagacactataagaagcgttgtcaaggccggatgcggaaacatgttggtgacctgtgt
ttacaagctgggatgttacaagattccttggtgcattatcacatggcagtggaacttctg
cggtctgtgaatgactttctgtggcttggagctgctctcgaggggttatgctcagcatca
gtcatttatcattatcctggtggtactggaggtaaagttggatctcgccgggcacaagga
ggttctctttctgctgaggcaggcaacaggcacagaccaggggcacaagaagttctcatt
gatccaggtgcgctgacttcgaacggtatcaacgcggacaccagcgctgagataggacgt
gccaagaattgcctgagtcccgaagacatcatagacaaatataaagaagccatttcttac
tatggcaagtacaagaacgctggcgtgattgaactggaagcctgcgtgaaggcggtgaga
gtccttgcgatacagaaaaggagcatggaagcctctgagtttcttcaaaatgccgtttac
atcaaccttcgacagctttcagaagaagaaaaaatccagcgctacagcattctctcggag
ctctatgaacggatcggttttcaccgcaaatctgcttttttcaagcggatcgcggccatg
caatgcgctgcgcccagcatccccgaacccggctggagggcctgctacaaattgcttttg
gaaactctccctggctacagtttatcactggatcctaaagatttcagcaaaggaactcat
cgaggatgggctgcagtgcagatgcgtttgctccatgaactggtttacgcttccagaaga
atgggcaaccccgctctctgcgtcaggcatctgtcgttccttctccagaccatgctggat
tttctttctgatcaagaaaagaaagatgtaacacagagcttggaaagctacacagcgaaa
tgtcctggtacgatggaattcatcacctttccagatggtttgaagttacctcctgttccc
ttcaccaaattgcctattgtgagatctgtgaagctcttgaacctcccgaccagtctccgg
cctcacaaaatgaaaagtttacttggtcagaatgtgtcaaccaaaagccctttcatatac
tctccaattattgctcatagtcgtggggaagaacggaataagaaaatagatttccagtgg
gtccagggagatgtgtgtgaagtccagttgatggtgtacaaccctatgccttttgagctc
cgagtagaaaacatgggtctcttgacaacaggagtagaattcgaatctcttcctgcggct
ctttccctacctgcggagtctggtctgtacccggtgactctggttggtgttcctcaaacc
accgggcagatcacagtcaatggttaccatacttcagtttttggagtctacagtgattgc
cttctggacaacctgccaggagtgaagaccaacggctgtacggttgaagtcatcccagct
ttgccaaggctgcagatcagtacctcccttccaaggtctgcccatacgctccagccttct
tcaggggacgaaatctccactaacgtgtctgtccagctttacaacggagagacccaacag
cttatcataaagttagagaatattggaacagaaccactggagaaactggaggtcacagtg
aaaacagtcaacactaaagagaaactgtatggggacttcttgagttggaagctagaagat
accctctcgcagttccctctaaaacctggaaagattgcaacattcaccgtgaacattaaa
gtgaaactggacttttcatgccaagaaaacctgctgcaagatctcagtgacgatggaatc
agtgttactggactgccgctctccagtccttttcggcaggttgtcaaaccgagagtagag
accaaacctattaatccacaagaaagcagcaaagtcggtgatttcagtcatgtgaagatg
ctggaagccattttgaattttaagtactctggtggaccaggacatgttgaaggatactac
aggaacctttcgcttggccttcacgtagaagtagagccgtctgttttctttacccgtgtc
agtacccttccggcaacaagcacccggcaatgccatctacttctcgatgtcttcaattct
acagaacatgagttgaccatcagtgctaggaacaatgaagatttaattctgcatgctggg
gaatgtcagcgcatggctatccaagttgacaagttcagttttgagagcttcccagaatcc
cccgctgacgggacacagtttgcgaatgcgaagcagctggaagaagaaaggcaacaagcc
aaaggtctggagattaacagcaagctggatatttgctggaaaattccttccttgaagcgt
gaaggggaagcaagtgtggaaggtgttcttaatcaactggtcctggagcacctacagttg
gctcctctccagtgggatatcctcgttgacggcaagctttgcgactgcgatatcgtggtg
gactgcaaagtgggagaccccatcccgttggaggtgaagctgaccaactggagcaaacac
agcgtggggcccttcgcgctcaccgtgacgccctaccaggattaccaaaacggggtgcac
aactacgagctgcaagatgccatcacctttgtgggttccaacaccttctacatcgattca
gtgaagccgaccaaagactctgtgtactttggagcacttctctttctctacacaggcgac
ttctacctgaatatcaagttccatgaggacaactgcagcaaggagctgcctctctcctgg
ttctgccttcctagtgtccacatacgtgctatggagcccatggtccaaactaagctctaa
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integrated database retrieval system
