Caloenas nicobarica (Nicobar pigeon): 135985828
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Entry
135985828 CDS
T11056
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135985828 (CARMIL1)
Membrane trafficking [BR:
cnic04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
135985828 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Cep57_CLD
IL34
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
135985828
NCBI-ProteinID:
XP_065485542
LinkDB
All DBs
Position
2:complement(102102495..102300177)
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AA seq
1423 aa
AA seq
DB search
MAEESSDVPKELIESVRDVIGRKIKISVKKKVKLETKGDKVDNKILVLASCRAFLLTSRI
PTKLELTFSYLEIQGVTSSKPGQLIMETEKCSISMKMASSEDVNEVLAHIGTCLRKIFPG
LSPVRILKKVTMEPSDRLANLQALWDSQTVAELGPCGGFSQMYACVCDWLGFPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLASNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLIANTLVYLDLSGNALRGDDLSSLYNF
LAQPNALVHLDLSNTECALDMVCGALLRGCLQHLAVLSLSRTLFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLPPEPLKALLLGLACNHNLKEVSLDLSSCELRSGGAQVLEGCIAE
IHNITSLDISDNGLESDLSTLVVWLSKNRSIRHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGVDAVQEDVKSA
ERLMRDAKNSKTLLPNLYHLGGASWAGANGSLSNPIQETLESMAGEVTRVVDEQLKTLLE
SMVDAAENLCPNVMKKAHIREDLIEASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRVVDEILDALSHCHHKLADHLTRRGKPLPQQESLEIELAEEKPTKRSIITVEE
LTEIERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPS
SRPDKRTSGFISELPSEEGRKLEHFTKLRPKRNKKQQPSQAAVSAGVPPEGDQNGLMGRV
DEGVDEFFTKKVTKMDSKRPSTKSSDSSEPSEAGDEKKKRDSRKSGFLNLIKSRGSKSER
PQTVLVAEEPSSPKVAAKSPAVETSKKEVKPAEQNGGTERSEELKTPDSLEEAQPDDAAK
TERGDSKGSPQGGRRYGVQVMGSGLLAEMKAKQEKRAASAQKKLGNDTTPRESFDTAMSS
ERLDGSGTVPKLQQTLPESRFASSKGDSISASSEKNAKAEPKAEAGTKARSSSNTPTSPK
PPLQSTKPSLAGRPTVPQKPRSASRTEDAPESPSGPSSPKVALLPPALKKVPSDKEKDGQ
SSPTVRSFSQEEQAGDCQNAAHDCAKASDSVKTASGQYSTSAEEEAHVLGQSKAEPTSAV
KRSPGQQSHEFQELKQRSLSKDGHQGSKSSDSGEEADKDFIFV
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagagctccgacgtccccaaagagttgatcgaaagcgtcagggatgttatt
gggaggaaaattaaaatttcggtcaagaagaaagtaaaactggaaaccaagggagataaa
gtggataacaaaatattggtgttggcatcgtgtcgggcatttcttttaacatctcggatt
cccaccaagttagaactaactttcagctacttggaaatccaaggagtaacttccagtaaa
ccaggtcagttgattatggaaactgagaaatgcagcatctccatgaagatggcgtcctcg
gaggatgtgaacgaggtgctggcgcacatcgggacctgcctcaggaagatattccctgga
ctctcgccagtgaggattctgaaaaaagtaactatggagccttcagacagactggctaat
ctccaggccctgtgggacagccagacagtggcagaacttggaccttgtggaggcttttcg
cagatgtatgcctgtgtttgtgactggcttggatttccctatagagaagaagtacagtgg
gatgtcgatacgatttatctgacacaagataccagagagttgaacttgcaagacttcagc
caccttgaccacagagacttaatacctatagttgctgctctggagtataatcagtggttt
acaaagctgtcctccaaggatctgaaattatccactgatgtctgtgagcagatactgcga
gtggtgagtaggtccaatcggttggaagaactggtattagagaatgccgggcttagaaca
gattttgcacagaaactagccagtgccctagcccataatcccaactcaggactccataca
atcaaccttgctagcaatccacttgaagatagaggtgtgtcatctttgagcatccagttc
gccaaacttccaaagggactgaagcatttaaatttatctaaaacctccttgtcacctaaa
ggggtgaacagcctttcccagtcactgagtgccaactcgctgatcgcgaacacgctcgtc
tatcttgacctctcagggaacgcactccgcggcgatgatctctcaagcctgtacaatttt
ttggcccaaccaaatgcccttgttcatctggatttatccaacacggagtgtgcgctagat
atggtgtgtggagccctccttcgtggatgtcttcagcatttagctgtgcttagcctctct
aggacccttttttctcacagaaaaggaaaagaagtccctccctccttcaaacagtttttc
agcagctcacttgctttgatgcagattaatctttcgggaactaaactccctcctgagcct
ctaaaagcgcttttattaggcctggcttgcaatcacaatctgaaggaggtgtctttagat
ctcagtagctgtgagttaagatcgggaggtgcacaagtcttggaaggatgcatagcagaa
atacacaatatcaccagcctagatatttcagacaatggcctagaatccgacctctcaacc
cttgtagtatggcttagtaaaaaccgatcgataagacacttggcgttaggcaaaaacttt
aacaacatgaaatccaaaaatctcactccagtacttgataatttagttcagatgattcaa
gatgaggattcacctctgcagtcattgtccctcgcagattccaagctgaagactgaggtc
accatcattattaatgccttgggcagcaatacttctcttacgaaagtggatattagtgga
aatgccatgggagatatgggagcaaagatgctggcaaaagccctacagataaacaccaag
ctcagaactgtaatatgggacaagaataacatcactgcacagggcttccaggacatagct
gtggcactggaaaagaattatactttgagattcatgcctataccgatgaacgatgcttcc
caagcactcaaaacaaaccccgagaaaacagaagaagcgctgcaaaagatagaaaactac
ttgcttcgtaatcacgagaccagaaaatacctacaggagcaagcgtaccggctgcagcaa
ggcattgtcacgagtaccactcagcagatgattgacagaatatgtgtaaaagtgcaagat
catctcaactctttaagaaactgtggtgtggatgctgtacaggaagatgtgaaatctgca
gaacgccttatgcgggatgctaagaactccaaaacactcttaccaaatctgtatcacctc
ggtggagcttcttgggcaggagcaaatggttcactctccaatccaatccaagagacactt
gaatccatggctggagaagtcacaagggtcgtggatgagcaacttaagacactccttgag
tctatggtggatgcagcagaaaacctttgcccgaatgtgatgaagaaagctcacatccgt
gaagacctgattgaggctagcactgagaagatttccatcccacgcacttttgtgaaaaat
gtcctcttggagcaatctggaattgatatcctcaataaaattagtgaagtaaagctgaca
gtggcttctttcctgtctgaccgagtcgtagatgaaatcctggatgcactttcccattgc
catcacaaactggctgaccatttgactagacgtggcaaaccacttccacagcaggaatca
ctggaaattgagttagctgaagaaaagccaactaaacgctctatcatcacagttgaggag
ttgacagagatagaacgtttggaggacctggacacttgtatgatgactcctaaatcaaaa
agaaaaagcatccacagtagaatgctccggccggtgtccagagcttttgaaatggaattt
gatctagataaagcactggaagaagtacctatccatatagaagacccaccgtttccttcc
agcaggccggacaaacgaacttctggattcatttcagaactgccatcagaagaagggaga
aaactggaacactttacaaaattaagacccaaaaggaataaaaagcagcagcccagccaa
gcagcagtgtctgctggagtgcctccagaaggggatcagaacggcctcatggggagagtg
gatgaaggtgtggatgaatttttcactaagaaagtgacaaaaatggattcaaagagacca
tcaactaaaagttcagacagcagcgagcccagtgaagcaggtgatgagaagaagaaaaga
gactcaaggaagagtggcttccttaacttaatcaaatcaagaggctccaaatctgaacgt
ccccagactgtgttggtggcagaggagccctcttcacccaaggttgctgcaaaaagtcca
gctgtggagacaagcaagaaggaagtaaagcctgcagagcagaatggtggtacagagcga
tctgaggaattgaagacaccagactcgctggaggaggcgcagccagatgatgcggccaaa
actgagagaggtgacagcaaaggaagcccacaaggaggccggaggtacggcgtacaggtg
atgggcagtggacttctcgcagaaatgaaagccaagcaggagaagagagcagcctctgct
cagaagaaacttgggaatgacacaactcccagagagtcttttgacacagcgatgagctca
gaacgactggatggaagtggtacagtgcctaaactccagcagacccttccagagagtcgg
tttgcctcgagtaaaggtgactccatctcagcatcatcagaaaaaaatgcaaaagctgaa
ccaaaggcagaagctggcacaaaggcaagaagttcttccaatacaccgaccagccccaaa
cccccactgcagtcaacaaagcccagcctggcaggacgacccacggtgccgcagaaacca
cgctctgcctctcgcactgaggatgctccggagtctccctctggccccagttccccaaaa
gttgccctgcttccacctgcgctgaagaaagttccttctgataaagaaaaggatggtcag
agcagccccacagtcagatcgttttctcaagaagagcaagctggagattgtcaaaatgca
gctcatgactgtgccaaggcatctgacagtgtgaaaaccgcgtcggggcagtattctacc
agtgcagaagaggaagctcatgtgcttgggcagagcaaggcagagcccacttctgctgtg
aaaagaagccctgggcagcagtcccatgagtttcaggaactgaagcagagatccttgagt
aaagatggccatcagggaagcaagtccagtgactctggtgaagaagcagataaagatttt
atttttgtttag
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