Caloenas nicobarica (Nicobar pigeon): 135985830
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Entry
135985830 CDS
T11056
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135985830 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135985830 (TAF4B)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135985830 (TAF4B)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135985830 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
135985830 (TAF4B)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135985830 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
135985830
NCBI-ProteinID:
XP_065485548
LinkDB
All DBs
Position
2:117219684..117293409
Genome browser
AA seq
847 aa
AA seq
DB search
MSTSAAAPVRLMPSGHPEQAAAAAAPPVKLLCAPAAGPVPDPGSPTAKVPGGPAPSAAPQ
PPPPRLAAAPVVARVAAPGGPRPVAPKRPPAATLQLPANFQLPPGTVLIRSSNGQLMLVS
QQAIAGTQSQPQNNTSVRPSVPTTTPTIRICAVQNSGTQLLKKVTSTPVKSLSQTTNAVA
STVQAPAVIQPAAATASVTTVTAVKPSSTGTPVKLPVTGPPAQAVSQKAVSVKAEGTTVA
QTSTSTEMLENVKKCKNFLATLIKLASSGPQASQMGQNVKNLVQNLLEAKIEPEEFTKKL
YIELKSSPQPYLVPFLKKSMLALRQLMPNAQSFIQQCMQQSAPTQETVLTCTSAAPAPST
AVATSAVATGSLPVIKPVSASVTVTASPVIKPVLVTVSTTASVQTVKPVPASVVVTASLR
PAASVLTTTTATPGLTAVQNVKPVFTSVVAKSSLQSAKPVLVSTATSSATTPLQPLKPVA
GTPISIKISQPNSIVAQSVGAQQVVKVKQLVVQQPSGTIVKQVSTLPQPSTLTLQTSAEK
RMPLNTLIQTNQFSAGSTLKQITLPGNKILSLQASSVQNAKIKENGTTSFRDEDDINDVT
SMAGVNLNEENACILATNSELIGTVIHSCADEPFLSSEALQKKILNIGKRHDIMELNSDV
VNLISHATQERLRGLLEKLTVIAQHRVSTHKGNDRYIISSDTRAQLRFLEKLDHLEKQRK
DEEEREMLLRAAKSRSNKEDPEQLRLKQKAKEMQQLELAQMQQREANLTALAAIGPRKKR
PLDSSNIGSGLEGLNGNGIAPGSSGFGLTKQLLCPRITRICLRDLVFCMEQEREMKHSLT
LYRALLK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctcggcggcggcccccgtcaggctgatgcccagcgggcacccggagcaggcg
gcggcggccgccgcgccgcccgtgaagctcctctgcgcccccgccgcgggcccggtgccc
gacccgggcagccccaccgccaaggtgcccggcggcccggcgccctccgccgccccgcaa
ccgccgccgccgcgcttggcggccgctcccgtggtggcgagggtggccgcccccgggggc
ccgcggcccgtggcgcccaagcggccgcccgcggccaccctgcagttaccggccaacttc
cagctgcccccaggaactgttctcattagaagcagtaatggccaactaatgctagtatct
caacaagcaatagcaggaacacagagtcagccacaaaataacacaagtgtgagaccatct
gtaccaaccaccacacctacaatcagaatatgtgctgtacagaactctggcacccagtta
ctaaagaaagtaacatctactcctgtgaaatcattatctcaaacaacaaatgctgtggct
tctactgttcaggcacctgctgtaatacagccagcagctgcaacagctagtgttactaca
gttactgctgtaaagccttcgagtactggaacacctgtaaaacttccagttacaggacca
cctgcgcaagctgtctcccaaaaggcagtctctgtgaaagcagagggcacaacagtagca
cagaccagcacttctacagagatgctagagaatgtgaagaagtgcaagaattttcttgct
acactaataaaactggcatccagtggacctcaagcctctcagatggggcagaatgtgaag
aatctggtgcaaaatctattggaagcgaaaattgagccagaagaatttaccaaaaaacta
tacatagagctcaagtcatctccacaaccgtatttagttccttttctcaagaaaagcatg
cttgccttacggcagctaatgcccaatgctcagagctttatccagcagtgtatgcagcag
tcggctccaacacaagaaactgttttgacttgtacctctgcagcaccagctccttcaaca
gcagtggcaacctcagctgtggcaacaggttctcttccagttataaaaccagtgtctgcc
tctgtaacagtcacagcctctccggttatcaaaccagtccttgtcactgtgtcgacgaca
gcttctgtgcagactgtgaagcccgttcctgcctctgtggtggtgacagcatctcttcgg
cctgcagcttcagtcctcaccacaaccacagcaacaccagggctgacagctgtccaaaat
gtcaagcccgtcttcacttcggtggtagcaaagtcctctctccagtctgcaaagccagtg
ctggtctctacagcgacatcttcagcgacaacccctctccagcctctgaaaccagttgcc
ggaaccccaatcagtattaaaatctcacagccaaactccattgttgcgcagtcagtgggt
gctcagcaggtggttaaagtgaaacagttggtagtccagcaaccgtcaggaaccattgta
aagcaagtatccacgctcccacaaccctcaacgctgaccctacagacatctgctgagaaa
aggatgccactgaatacactcattcaaactaaccagttttctgcaggttccactctgaaa
caaattaccctgccaggaaataaaattctgtcgcttcaagcatcttctgttcagaatgct
aaaataaaagagaatggaacaacatccttcagagatgaagatgacataaatgatgtgact
tctatggctggggtcaatcttaatgaggagaatgcgtgcattttggcaacaaactctgag
ctcattggtacagtgatccattcgtgtgcagatgaaccttttctctcctcggaagctctt
cagaagaagatcctgaacataggtaaaaggcatgacattatggaacttaactctgatgtt
gtgaacttgatctcccatgctacacaggagagattacgagggctcctagaaaaactaact
gtaattgctcagcacagagtatcaacccacaagggcaatgataggtacatcatatctagt
gacaccagagcacagctgagatttcttgaaaagcttgatcacctagaaaagcagagaaag
gatgaagaggaacgtgaaatgttgcttcgagcagccaagagccgttccaataaagaagat
ccagagcaactgcggttaaagcagaaagcgaaagagatgcaacaattggagctagcacaa
atgcaacagagagaagccaatctcacagctttggcagccattggaccaaggaagaaaaga
ccactggattcatcaaacattggatctgggctggagggtttgaatggcaatggaattgct
cctggatcatcaggttttggccttacaaaacagctgctctgtccaagaataacccgcatc
tgtctcagggacttggtattctgcatggaacaagagagggagatgaagcattctctaacc
ttgtaccgtgctcttctgaagtga
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