Caloenas nicobarica (Nicobar pigeon): 135985995
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Entry
135985995 CDS
T11056
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135985995 (ZEB1)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
135985995 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2HE
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
135985995
NCBI-ProteinID:
XP_065485803
LinkDB
All DBs
Position
2:complement(16359262..16481624)
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AA seq
1109 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHTVLPENSERDGSTNSCWEDEAGKETKEILGPEAQTDEVGCTVKEDECDSDAENE
QNHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLDRHMTSHKSGRDQRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKTSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPVNQIKTEPVDYEFKPIV
VASGINCSTPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLASKEQETIGNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPPNSCKNEKTPEDLTVKSEKDKNCEGETNDSTCLLCDDCPG
DLNALQELKHYETKNPPQLPQPSGTEAEKPNSPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKSSSPTNND
DQAATTNVAEPQSSTDNSQNPVNTTKSQTLPGGSALNGSRSSTPSPSPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DNSVTDSDPIVNVIPPSANPINIAIPAVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVQETPPKQQTQANGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRK
TENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEK
PYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDGTEQEETGQEVLSSEHAGARASPS
QIDSDERESLTREEEEDSEKEEEEEEEKEVEGLQEEKECRKLQEAEDDEEEEEEGKTEGN
KNDEVVNQASNAEPEVIQNNGQVSEEKNK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcaggcgaacccgaggcgcaataacgtc
accaattataataacgtcgtagaagcaaactcagattcagatgatgaagataaattgcat
atagtggaagaagaaagtgtaactgatgcagcagactgtgatgccagtgtgccggaagat
gacttgccgacagaccatacagtattaccagaaaacagtgaaagagacgggagtaccaac
agttgctgggaagatgaagctggaaaagaaacaaaggaaatcctggggcctgaagctcag
acagatgaagttggatgtacagtaaaagaagatgaatgtgattccgatgcagaaaatgaa
caaaaccatgaccctaatgttgaagaattcctgcaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacgccagaagcgagtggtcaggatgaa
aatggaacgcccgatgcattttcccaactgcttacttgcccatattgtgatcgagggtac
aagcgttttacctctctgaaggaacacattaaatatcgccatgaaaaaaatgaagataac
tttagttgctccttgtgcagttacacgtttgcgtacagaacgcagctcgaccgccacatg
acatcgcacaaatcaggaagagatcaaagacatgtgacgcagtccagtggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacatcacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccgaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgggcccgatcagggctcaagacgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaaaatagaaaataaacccttgcaagag
caacttcctgttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcgacccctttgcagaatggggtttttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaacttaagtgacattcaaaatgtacttaaagtggca
gtggatggtaatgtaataaggcaagtattggaaaacaatcatgctaatcttgcatccaaa
gaacaagaaacaatcggcaatgcatctatacaacaagctggccattctctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcagcttcaggttgttccacaaaatcttaaaaaagaaaactctgttcct
ccaaatagttgcaaaaatgaaaaaacaccggaagatcttacggtgaagtctgagaaagat
aagaactgtgaaggagagaccaatgatagcacttgtcttctttgtgatgactgtccagga
gatcttaatgcacttcaagaattaaagcactatgaaacgaaaaatcctcctcagcttcct
caacccagtggaacagaagctgagaagcccaactctcctgtcccatcagaaactggggag
aacaacttatctcctggtcagccacctttaaagaaccttttatcgctcttaaaagcatat
tatgcattaaatgcacaaccaagcgcagaagagctttcaaaaatagctgattcggtgaac
ctaccactcgatgtggtaaaaaagtggtttgaaaaaatgcaagctggacaaatttctgtg
cagtcttctggaccgtcttctcctgaacaagttaaatcaagcagtcccacaaacaatgat
gatcaagcagcaactacaaatgtggctgaaccccagagcagcacagataattcacaaaat
cctgtcaatacaacaaaatctcagactttaccagggggatctgctctgaatggttcacgc
agtagcacgccgtccccatcgccactaaacctttcttcgtcaagaaattcacagggttat
acgtacacagcagagggtgtacaagaagagccacaaattgaacctcttgacctttcgcta
ccaaagcaacatggagagctattggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaggaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacaacagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctgcagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccatgcttgagagctcttgctgccaataagcaaaccattttgattccg
caggtggcttatacatactctactacagttagtcctgcggttcaagaaacaccaccaaaa
caacagacccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggagta
tcgaatgtagaagatcaaaatgattctgattcaacacccccaaagaaaaagatgagaaag
acagaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagtagctcg
ttattgagacataagtatgaacacacaggtaaaagacctcatgagtgtggaatctgtaaa
aaagcttttaaacacaaacaccatttgattgaacacatgcgactacattctggggaaaaa
ccctaccaatgtgacaaatgcggaaagcggttttcacactcgggatcttactctcaacac
atgaatcatcgctactcctattgcaaaagagaggcagaagagcgtgacggcaccgagcag
gaggagacgggccaggaggtcctcagcagtgagcacgctggtgccagggcgtctccatcg
cagatcgactcggatgagagggagagtctcaccagggaagaagaggaagacagtgaaaag
gaggaagaggaggaggaagaaaaagaggtagaaggacttcaggaagaaaaagaatgtaga
aaactacaagaagcagaggatgatgaagaagaagaagaagaagggaaaactgaaggtaac
aagaatgatgaagttgtaaatcaagcaagcaatgcagaaccagaagttatacagaataat
gggcaggtgtcagaagaaaaaaacaaataa
DBGET
integrated database retrieval system
