Caloenas nicobarica (Nicobar pigeon): 135986008
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Entry
135986008 CDS
T11056
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnic03032
]
135986008 (TOP2B)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135986008 (TOP2B)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
135986008 (TOP2B)
DNA replication proteins [BR:
cnic03032
]
Eukaryotic type
DNA Topoisomerases
135986008 (TOP2B)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
135986008 (TOP2B)
Centrosome formation proteins
Centriole proteins
135986008 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
DUF7180
ELP3_N
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
135986008
NCBI-ProteinID:
XP_065485817
LinkDB
All DBs
Position
2:complement(41928999..41976314)
Genome browser
AA seq
1575 aa
AA seq
DB search
MSVERVYQKKTQLEHILLRPDTYIGSVEPLTQVMWVYDEDVGMNCREVTFVPGLYKIFDE
ILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT
SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEPKIK
HFDGDDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCKGVKVMLNGKKLPVNGF
RSYVDLYVKDKLDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATTKGGRHVD
YVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKENMTLQPKS
FGSKCQLSEKFFKAASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDA
GGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEI
NNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKH
GFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAKEAKEY
FADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYG
TATKHLTYNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQL
AGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIF
TMLSPLARLLFPSVDDNLLKFLYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNY
DTREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYVVSGEIFVVDRNTVEITELP
VRTWTQVYKEQVLEPMLNGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHK
VFKLQTSLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTK
LNNQARFVLEKIQGKITIENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDPQNPN
DDASSASGSTSGPDFNYILNMSLWSLTKEKVEELIKQRDSKERDLNDLKRKSSSDLWKED
LAAFVEELEKVEAQEREDVLAGMVGKPIKGKVGKPKMKKLQLEETMPSPFGRRIVPQITS
AMKADASRKLLKKKKGETDSIAIKMEFDEEFGGVPAEGGGDESLNTSATATKTPKPKREK
KEPGTRVRRTPSSTKPGAKKVKKRNPWSDDESKSESDLEENEPVIIPRDSLLRRAAAERP
KYTFDFSEEEDDADDDDDANNNNDLDELKVKASPVTNDREDEFVPSDSLEKDEYDFSPAK
SKPSPDRKMSQDKKNQDFGNIFSFPSYSQKTDDDTTKLDSDEEDSAPVFSSSFAPKQTEK
IPSKTVAAKKAKLDVPPKPKRAPKAKKVETVNSDSDSEFGIPKKTAAPKGKGRGAKKRKT
SSSENEGEYNPGKKTPKSTPSKKSKKAAFDQDSDVEIFQPGFASETAPKPRTGRARKEVK
YFAESDEDDDFDMFN
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgagagagtttatcagaaaaagactcagcttgagcacatcctcctccgtcca
gatacctacattgggtcagtggagccattaactcaggtaatgtgggtttatgatgaagat
gtaggaatgaattgcagagaagttacctttgttccaggcttgtacaagatcttcgatgaa
atccttgtaaatgctgctgataataagcagagggacaagaatatgacttgtattaaaatt
tccattgatccggaatcaaacattatcagcatatggaataatggaaagggtataccagtt
gtggaacacaaagtagaaaaagtatatgtacctgctttaatctttgggcagctgctaaca
tccagcaactacgatgatgacgagaaaaaagttacaggtggacgcaatggctatggtgca
aaactttgtaacatatttagtacaaagtttacagttgaaactgcttgcaaggaatacaaa
catagctttaagcagacttggatgaacaacatgatgaagacctctgaacccaagattaag
catttcgatggtgatgactacacatgcattacattccagccagatctatctaaatttaaa
atggaaaaacttgataaggatattgtggccctcatgacaagaagagcatatgatttggct
gggtcatgcaaaggagtcaaagtcatgttgaatgggaagaaactacctgtaaatggattt
cgcagttacgtagatctctacgtaaaagacaagctggatgaaactggagttgcactcaaa
gttattcatgaagttgtgaatgaacggtgggatgtgtgtctcactttaagtgaaaaaggg
tttcagcaaatcagctttgtaaatagtatagctaccacaaagggtggtaggcacgttgat
tatgtggtggatcaggttgtgggcaaactgatagaagtggtgaaaaagaagaataaagct
ggagtttcagtgaaaccatttcaggtgaagaatcatatatgggtttttgttaattgcttg
attgaaaacccatcatttgattcccagacaaaggaaaatatgacattgcagcctaaaagt
tttgggtccaagtgccagctatctgagaaattttttaaagcagcctctaactgtggtatc
atagagagtattttgaactgggtcaaatttaaggcacaaactcagctgaacaaaaaatgt
tcatcagtgaaacacagtaaaatcaagggcattccgaaactggatgacgctaatgatgct
ggtggcaaacattccttggactgcacgttaatattaacagaaggagactctgccaaatct
ttagctgtctctggcttaggtgttattggtagagacagatatggagtattcccactcagg
ggtaaaattctcaatgttcgagaagcttctcacaaacagatcatggaaaatgcagaaatc
aacaacataatcaagatagttggactacagtacaagaaaagctacgaagatccagaatct
ctgaaaagtttgagatatggaaaaattatgattatgacagatcaggatcaggatggatct
cacataaaaggtttgttgatcaattttattcatcacaattggccatcactgttgaaacat
gggtttcttgaggaattcatcactcccattgtaaaggcaagcaaaaataagcaagaactt
tcattctatagtattcctgaatttgatgagtggaagaaacatatggagaatcataaagca
tggaagataaaatactacaaaggtttgggtaccagcactgctaaagaagcaaaagaatat
tttgctgacatggaaagacatcggatcttatttcgatatgctggtcctgaagatgatgct
gccattacactggccttcagtaagaagaagattgatgaccgaaaagagtggttaacaaac
ttcatggaggataggcgacagcgtcggctacatggccttcccgagcaatttttatatggt
acagcaacaaaacatttgacttacaatgacttcattaacaaggagttgatccttttctca
aattcagacaatgagagatctattccttcccttgttgatggtttaaaaccagggcaacgc
aaagttttatttacttgctttaagagaaatgataaacgtgaagtgaaggttgctcagctg
gctggttctgttgctgaaatgtcagcttatcaccacggggagcaagcgttaatgatgact
attgtcaacttggctcagaactttgttggcagtaacaatgtgaatctgctacaacctatt
ggtcagtttggtaccaggcttcatggtgggaaggatgctgctagccctcgctatattttc
accatgttaagccctttagcaaggctgctttttccgtcagtggatgacaacttgctgaaa
ttcctttatgatgacaaccagcgtgtagagcctgaatggtatattcccatcattcctatg
gttttagtaaatggagctgaaggaattggtactggatgggcttgcaaacttccaaactac
gataccagagagattgtaaacaatgtcagacgaatgctggatggcttagatccccaccca
atgctcccaaactacaaaaacttcaaaggaactattcaggaacttggtcaaaaccagtat
gtagtcagtggtgaaatatttgtggtggataggaacacagtagaaattacagagcttcct
gtaaggacatggacccaggtgtacaaagaacaggttctagaacctatgttgaatggcact
gaaaaaaccccagcattaatttctgactataaggaataccacactgatacgactgtgaaa
tttgttgtgaagatgacagaagaaaaacttgcacaggcagaagctgctggattgcacaaa
gtctttaagcttcaaacaagtcttacttgtaattctatggtgctatttgatcatatggga
tgcttaaagaagtatgaaactgtgcaagacattttgaaggagttctttgatttgcgatta
cattattatagtttacgcaaggaatggcttgtggggatgttgggtgcagaatctaccaaa
cttaacaatcaagctcgtttcgttctagagaagatacaaggaaaaattaccatagagaac
agatcaaaaagagatttgattcagatgttggtccagagaggttatgaatctgatccagta
aaagcctggaaggaagcacaggaaaaggcagcagaagaggaggacccacagaacccgaat
gatgatgcttcttctgcgtctggctcaacttctggccctgattttaactatatcttaaac
atgtctctgtggtcacttacgaaagagaaagtagaagagttaattaaacagagggattca
aaggagagagatctaaatgaccttaaaaggaaatcatcttcagatctctggaaagaagat
ttagcagccttcgttgaagaacttgaaaaagtggaagcacaagaaagagaagatgttttg
gctggcatggttggcaaaccaataaaagggaaagttggtaaacccaagatgaagaaactt
cagctggaagagaccatgccctcaccatttggcagaagaatagttccacagattacgtct
gccatgaaagccgatgccagtaggaaattgctgaaaaagaaaaagggtgaaactgattct
atagcaataaaaatggaatttgatgaagaatttggtggtgtgccagctgagggtggtggg
gatgagtcactgaatacatcagccacagcaactaaaacccctaaacctaaaagagagaag
aaggagcctggtactagggtaagaagaacaccatcatctacaaaacctggtgcaaaaaaa
gtgaagaaacgaaacccatggtcagatgatgaatccaagtctgaaagtgatttagaagag
aatgagcctgtgattattccaagagactctctacttaggagagctgcagcggagaggccc
aaatatacttttgacttctcagaagaagaagatgatgccgatgatgatgatgatgccaac
aataataatgatttggatgagctcaaagtaaaagcctctccagttacaaatgacagagag
gatgagtttgttccctcagacagtttagaaaaagatgaatatgacttctccccggccaaa
tcaaagccgtctccagacaggaaaatgtctcaagacaagaaaaatcaagattttgggaac
atcttctcttttccatcttactctcagaagacagatgatgatacaacaaaattggacagt
gatgaagaggattctgctcctgttttctcatcatcttttgccccaaaacaaacagagaaa
attccaagcaaaacagtagctgctaaaaaggcaaaactagatgtgccccctaaacctaaa
cgagctcccaaggccaagaaggtggaaactgtaaactctgactcggattcagaattcggc
attccaaagaagactgcagcacccaaaggaaaaggtagaggggcaaagaaaaggaaaaca
tccagctcagaaaatgaaggtgaatacaaccctgggaagaaaacacctaaatcaacacca
agcaagaaatccaagaaggccgcttttgaccaggactctgatgtggaaatctttcagcca
ggctttgcctccgaaactgccccaaagccacggacaggccgggctagaaaagaagttaaa
tatttcgcagagtctgatgaagatgatgattttgatatgtttaattaa
DBGET
integrated database retrieval system
