Caloenas nicobarica (Nicobar pigeon): 135986589
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Entry
135986589 CDS
T11056
Symbol
LAMA4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04510
Focal adhesion
cnic04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135986589 (LAMA4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135986589 (LAMA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_laminin
EGF_LMN_ATRN
Laminin_G_3
PTS_IIA
Motif
Other DBs
NCBI-GeneID:
135986589
NCBI-ProteinID:
XP_065486788
LinkDB
All DBs
Position
3:complement(49895272..49995440)
Genome browser
AA seq
1827 aa
AA seq
DB search
MALISAWPLVSPILFFLRCFSSSTASSGGGVFQFDIEGSSAVSAQEATVIRGQQQAVATG
SWVPFAERCQEGFYRTSSGKCSPCNCNGNANRCLDGSGTCVDCQRNTTGEHCEQCPDGFI
GDIVRGVPTFCQPCPCPLPALANFAVSCYRKSGSVRCVCKENYAGPNCERCAPGYYGNPL
LIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLHNTTGFKCERCAPGYYGDAKVAKNC
TECNCGGRMCDSQTGECLADSPEVSSGTDCPTISCDKCIWDLTDDIRLAVLAIDESKSTL
LSISTGVAAQKRLNDLNLTATHLQAAMSEKKNHAVLWTVQVDDAEDEMNDFLREAAILDE
QGNEASSRGLLVQKETVETNSRATQLVQQLGNMRDNIQEISSKMKYYAIQQELSPEEIAQ
KLSVAEEMLKEIKHRKPFTNERQRADEEEDAAEDLLQKVEEFHERYNDTRSLVSDVLEQL
SDQDVKLSDLEEAIDQALDRVLQTEDINKKNTASLQRREEQDEKIKEQIDEVNDILLSAT
TILAGPQKVNSELSEVIKNVSGFYAEIDGAKKELQEKLANLSLFDDDLVEKAMQHAHNLR
RLADELDWNLHGVDANGLVQRAINASNVYENIAGYVEEANKAALLALNTTNRVNDAAVGI
DTQIIYHKGKSNELLNRAIELHRTADDRNDLTIADTSQYVNGTLARMNALRSQLMRAITK
MQSAEPVEARERLEQAKLKTAEAVSATMTVTQATIPMDENVRLWSQNLQDFQHNSAAYNS
AVHSAGDAVKKLTEVFPQLLDKLRRVEQKAPANNISSSIQRIRELIAQTRSVASKVQVSM
MFGGQSAVEVNPKINVEELKSFTSMSLYIKLEKDNPQLAASPDRFILYLGNKNAKNYIGL
AIKNDNLVYIYNLGDQDVEIPLDAKPVSTWPSYFSIIKIERVGRHGKMFLTVPSLSSTDE
EKFIKKGEVLGPGSLLNLEPENAVFYVGGVPQDFKLPPGLNLPGFIGCLELATLNDEVIS
LYNFKHVYNIDTTTSPPCARNKLAFTQSRAVSYFFDGSGYALARNIERRGRFSQVTRFDI
EVRTPTDNGLILLMINGSMFFSLEMHNGFLYLRYDFGFSTGPVLLEDSMKKAQINDAKFH
EISIIYHNSKKMILVVDRRHIKSVDNERTAMPFTDIYIGGAPAEILHSSISSHLAGSIGF
KGCMKGFQFQKKDFNLLEEPGTLGISYGCPEDSLMSRKAYFNGESFIASSQKVSLFTEFE
GGFNFRTLQPNGLLFYYSEGSDVLSISMDRGAVVLNASGTKIQSPDRNYNDGKTHFIITS
VTPERYELTVDDKKQSKKNPAKDRAGKSLDSNKKFYFGGSPLRTQQANFTGCISNAYFTW
LDREVEVEDFQKYSEKVQASLYGCPVESPPVALLHKKGKNSSKAKGNRNKKVGRDKDKIS
QPSSGLKKLYQEVNMQRDPQCHLPMNPKAIEHAYQFGGTANSRQEFDHIPKDFNERAQFS
ISLKTHSSHGMIFYVSDQKENNFMALFVAHGRLVFMFNAGHQKIRIKSQEKYNDGLWHNV
IFIRGKNIGRLIIDGLRVLEEPFGGNANTWQVTEPLYIGGVAPGKAVKNIQINSVYSFSG
CLSNLQLNGRSITSASQTFSVTPCFEGPSEAGTYFSSEGGYVVLDESFSLGLKFEVVFEI
RPRSSSGILLHGHSVNGEYLNMHMRNGQVTVKLNNGIRDFSTSVTLKQSLCDGRWHRIAV
IRDANVVQLDVDSEVNHVVGPLNPKATDHREPVFIGGVPESLLTSSLTTRNSFIGCIRNF
MIDEKPVSFSKAALVSGAVSINTCPAA
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatctccgcctggcccctcgtttctcctatattattctttttgagatgcttc
tcctccagcacagcctcaagtgggggaggcgtttttcagtttgacattgaaggtagctca
gcggtcagcgcgcaagaagccactgttatcagagggcagcagcaggcagtagctactgga
agttgggtgccttttgctgagagatgccaagaaggattttaccgtaccagctcaggaaaa
tgctctccttgcaactgcaatggtaatgcaaacagatgtcttgatggatctggaacctgt
gtggactgccagagaaacacaacaggagagcactgcgagcaatgtccagatggcttcatc
ggtgacattgtcagaggagtgcccacgttctgccagccctgcccctgccccctgccagcg
cttgccaactttgcagtctcctgttacagaaaaagtggaagtgtgcgctgtgtctgtaag
gaaaactatgcaggacccaactgtgaaaggtgtgcccccggttactatgggaacccgttg
ctaattggaagcacttgtaaaaaatgcgactgcagtggcaactcggacccaaacctgatt
tttgaagactgtgatgaagtgactggccagtgccgcaactgcctgcacaacaccaccggg
ttcaagtgtgaacgatgtgctccgggttactacggggatgccaaagtcgctaaaaactgt
acagaatgtaactgtggagggagaatgtgtgacagccagactggagaatgccttgcagac
agtcctgaagtttcttctggcacagactgccctaccatcagttgcgataaatgtatttgg
gatttgacagatgacatccgattagcagttttggctatcgatgaaagcaaatcaacttta
ctgagcatttccacaggtgttgcagctcaaaaacgcttgaatgacctgaacctcacagcc
actcatctccaggcagcaatgtctgaaaaaaagaaccatgccgtgctttggacggtccag
gtcgatgatgctgaagatgaaatgaatgatttcctgagagaggcagcaatacttgatgaa
cagggaaatgaagcatcaagcagaggcctactggtacagaaagaaaccgtagagaccaac
agccgtgctactcagcttgtgcagcagctcggaaatatgagggacaacattcaagaaatc
agcagcaagatgaaatactatgcaattcaacaagagctgagccctgaagaaattgcccag
aagctgagtgtggctgaggagatgctgaaggagatcaaacaccgtaagcctttcactaat
gaaaggcaacgtgccgatgaggaggaagatgcagcagaggacttgctacagaaagttgaa
gagtttcatgagaggtacaatgacaccagatctctagtatctgatgtgctggagcagctc
agtgatcaggatgtgaagctgtcagacctggaggaggcaatagaccaggcgcttgaccgc
gttctacaaacagaggatataaataagaaaaacacagccagtcttcaaaggcgtgaggaa
caagatgagaaaataaaagagcaaatagatgaagtaaatgacattctgctaagtgccaca
actattttggcaggaccacaaaaggtcaactcagagttaagtgaggtaataaagaatgtg
tcagggttctacgcagaaatagatggagcgaaaaaggaattgcaagaaaaactagccaat
ctgtctctctttgacgatgatttggtagaaaaggctatgcagcatgcacacaacctaaga
agacttgctgatgagctggactggaatttgcatggtgttgatgccaatgggttggtacaa
agggcaataaatgcttcaaatgtgtatgaaaacatcgctggttatgttgaagaagctaat
aaagctgcattgctggcactgaacacaacaaaccgggtcaacgatgctgcagtgggaatt
gatactcagatcatttaccataaaggtaaaagcaacgaactcctcaaccgagccatagag
ctacaccggacagcagatgaccgtaacgatttaaccattgcagacaccagccagtacgtt
aatggcactcttgccagaatgaatgctctgcgaagccaactgatgagagccatcacaaaa
atgcaatcagcagagccagtggaggccagagagcgtttggaacaagctaaactgaagact
gcagaggctgtaagtgctaccatgacagtaacacaggctacaatccccatggatgagaat
gtgaggctatggtctcagaacctgcaagacttccagcacaattcagcggcgtacaacagc
gctgtgcattcagctggggatgcagtgaagaagcttacagaagtcttccctcaactcctg
gacaaactgcgcagagtagaacagaaggcaccagcaaacaatatttcttccagcattcag
cggatcagagagttaattgctcaaaccaggagtgttgcaagcaaggtccaagtttctatg
atgtttggaggccagtcagctgttgaagtcaatccaaagatcaacgtcgaggaactgaaa
tctttcacttccatgagtttgtacataaagcttgagaaagacaacccacaactggcagca
tctccagacagatttattttgtacctcggaaacaaaaatgcaaaaaattacattggtctt
gcaattaaaaatgacaatcttgtgtacatttataatctgggcgaccaagatgtggagata
cctctagatgccaaaccagtcagcacttggccttcttatttcagcatcatcaaaattgag
agggttggaagacatggcaaaatgtttttaactgtgcccagtcttagcagcacagacgaa
gaaaaattcatcaaaaagggagaggttcttggtcctggatctctgctgaatttggaacct
gaaaatgctgttttctatgttggtggagtgcctcaagacttcaagctccctcctggctta
aacctacccggcttcatcggctgcctggagctggctacgctgaacgacgaggtgatcagc
ctgtacaacttcaagcacgtctataacatcgacaccaccacatcgccaccttgtgccaga
aataagttggctttcactcagagtcgtgctgtgagctatttctttgatggctctggctat
gccttggcaagaaatattgaaagaaggggaagattcagccaggtgactcggtttgacata
gaagttcgaacacctacagacaacggattgatcctgctgatgattaatgggagtatgttc
ttcagtctagagatgcacaacggtttcttgtacctccgctatgactttggcttcagcacc
ggccctgtgcttctagaggactccatgaagaaagctcaaattaacgatgctaaattccat
gagatttctattatataccacaattctaagaagatgatcttggtagtagacaggcgacat
ataaaaagcgtggacaacgaaagaacagcaatgccattcacagacatctacatcggagga
gcacctgctgagatcttgcactccagcattagttcacatctggcaggaagtattggcttt
aaaggctgcatgaaaggtttccaattccaaaagaaggatttcaacttgttagaagaacca
ggaaccctaggaatcagctatgggtgcccagaggattcactgatgtcccgcaaagcatat
ttcaatggagagagcttcattgcatcaagccaaaaagtgtctctctttactgaatttgaa
ggaggttttaatttccggacattgcagcccaatgggttgctgttctactattctgaagga
tcagatgtattatccatctctatggacagaggtgctgttgtattaaatgcaagtggaacc
aaaattcagtcaccagaccgaaattacaatgacggaaaaactcacttcatcattacttct
gtcaccccagaaagatacgagctgactgttgatgacaagaaacaaagtaagaagaaccca
gcaaaggacagagcagggaaaagcctggacagtaacaagaagttttattttggtggctct
cccctcagaacacagcaagccaacttcactggctgcataagcaacgcttactttacttgg
ttggatcgagaggttgaagtggaagatttccagaagtactctgagaaagttcaggcttct
ttgtatggatgccctgttgaatctcctccagttgctcttctccataagaaaggaaaaaac
tcatcaaaagccaaaggaaaccgtaataaaaaggtgggaagagataaagacaagatctcg
cagccttcatctggcctcaaaaaactgtatcaagaagtgaacatgcaaagagaccctcag
tgccatttgcccatgaatcccaaggcaattgaacacgcatatcagtttggaggaacagca
aacagccggcaagaatttgatcacataccaaaggatttcaacgaaagagctcagttctct
atcagcctgaaaactcactcatctcatggaatgatattctatgtctcggatcaaaaagaa
aacaacttcatggcccttttcgttgctcatggacgacttgtttttatgtttaatgctggt
caccagaagataagaattaagagccaagagaaatacaatgatggcctttggcacaatgtg
atattcattagaggcaaaaatattggtcgcttgataattgatggtctccgagtactggag
gaaccttttggtggtaatgctaatacctggcaagtcaccgaaccactctatattgggggt
gtagctccaggaaaagctgtaaaaaatatccagattaactctgtctacagttttagtggt
tgtctcagcaatttacagctcaatggaagatcaattacttcagcttcacagacatttagt
gtaacaccttgctttgaaggcccatcagaagcaggaacatacttttcatcagaaggagga
tatgtcgtccttgatgaatccttcagtttaggcctgaaatttgaagttgtttttgaaata
cgtcctcgaagcagctcaggaattctactgcatggtcatagcgtgaacggagagtacctg
aacatgcacatgagaaatggacaggttactgtgaaactgaataatggaatcagggatttt
tcaacttcagtgacactgaaacagagtctctgcgatggcaggtggcaccgaattgcagtc
attagagatgctaatgtggtgcagctggatgtagactctgaagtcaaccatgtggtaggg
ccactaaatccaaaggcaactgaccacagggaaccagtgtttattggaggtgtaccagag
tctctgctaacatccagcctgactacacgcaactccttcattggctgcattcggaacttc
atgattgatgaaaaaccagtgagttttagcaaagctgctttggttagtggtgctgtaagc
atcaacacatgtccagcagcctga
DBGET
integrated database retrieval system
