Caloenas nicobarica (Nicobar pigeon): 135986611
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Entry
135986611 CDS
T11056
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04517
IgSF CAM signaling
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135986611 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135986611 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135986611 (SPTBN1)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135986611 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
135986611 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
135986611
NCBI-ProteinID:
XP_065486832
LinkDB
All DBs
Position
3:complement(120895164..121009846)
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVIRLMSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKHLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPIIDSLHDQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
AIQQRLADLQQLWNLLIEESEKRHRRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKAAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKAKTAVQAQTAATLPAKTQEIPLAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcgacagattatgacaatattgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtcgacgactgggacaatgaaaatagttctgctcggctgttt
gagcgatcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggttaattcccacttggcacgcgtgtcatgcagaattacggatttgtacacc
gaccttcgcgatggaaggatgctcatcaaacttctggaagttctttcgggagagagactt
cccaaaccaactaagggaaggatgcgcatccactgcctggagaacgttgacaaagccctc
cagttcctgaaagagcaaagagtgcacctagaaaacatgggatctcacgatatcgtggat
gggaaccacaggctgacacttggccttatttggaccattatcctgagattccagatccaa
gatatcagtgttgaaaccgaggacaacaaggagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggataccccaacgtcaacatccacaacttcaccaca
agctggagggacgggatggctttcaatgcactaatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcaacaccttggtctcactaagctcctggaccccgaggatatcagtgttgatcat
cctgacgaaaagtcaatcatcacctacgtggtgacctattaccactacttctccaagatg
aaagctttagccgttgaaggaaaacgtatcggaaaggtgcttgacaatgccattgaaact
gagaaaatgattgaaaaatacgaatcgctggcttctgaccttcttgagtggatcgagcaa
accattatcatcctcaacaaccgcaaattcgccaactcgctggttggagtgcaacagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccgcccaaatttacagaaaaagga
aacctagaagtgctgctttttaccatccagagcaaaatgagagccaataatcagaaagtg
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagccgaacatgaaagagaactggcactgcgaaacgagctcatcagacaagagaaactg
gaacaactcgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagcgaa
aaccaacgtctcgtttctcaggataattttggctttgaccttccagcagtagaggccgca
acgaagaagcacgaggccattgagacagacattgcagcatatgaagaacgagtccaggcc
gtggttgcggttgcgaaggagctcgagactgaaaattaccatgatatcaaacgcatcact
gcgaggaaggacaacgttatccgcctgtgggagtatctgctggagctgctcagggcgcgg
agacagcgactggagatgaatctcggtctgcagaagattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttctgctgtctcaagactatggcaaacatttg
ttgggagtcgaagacctgttgcagaaacatgctcttgtggaagctgacatcgctattcag
gccgagagagtcagaggggtcaatgcgtctgctcagaagtttgccaccgatggagaaggt
tacaagccctgtgacccgcaggttatcagggaccgcgtggcgcacatggagttctgttac
caagagctgtgccagctcgccgccgagcgccgcgcgcgcctggaggagtcccggcgcctc
tggaagttcttctgggaaatggctgaagaagagggttggatccgggagaaggaacagatc
ctgtcatctgatgactacgggaaggacctaaccagtgtcatccgcctcatgagcaaacat
aaggcgtttgaagacgaaatgagcggtcgtagtggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaggagcattttgggtctgagaaaatcagagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatctgccattaggaagaagcatctg
gaggaagcctctctcctccaccagttccaggctgatgccgatgacattgacgcgtggatg
ttggacatcctcaaaattgtctccagcaacgacgttggccacgatgaatattccactcag
tccttggtcaagaaacacaaagatgtggctgaagagattgcgagttaccggccgatcatt
gactcactccacgaccaggcgaaggctctgccgcaggagcacgccgggtctcccgatgtg
cagggcaggttgtccggaatcgaggaaagatacaaagaggttgcggagctgactcggctg
cggaaacaggccttgcaggatacccttgctctttataagatgttcagcgaggcagatgct
tgtgagctttggattgacgaaaaggagaagtggctgaataacatgcagattccagagaag
ctggaggacctggaggtgatccagcacagatttgaaagcttagaaccagaaatgaacaac
caggcatcccgtgttgccgttgtgaaccagattgccagacagctaatgcacagcggccat
ccaagtgagaaggagatcaaagcacagcaagataaactcaacacaaggtggagccagttc
agggaactggtagatcggaagaaggatgctctactctctgctctgagtatccagaactac
caccttgaatgtaacgaaaccaagtcctggatcagggaaaagaccaaagtgatcgaatcc
acacaagatctgggtaatgacctggccggagtgatggccctgcagaggaagctgacgggc
atggaacgtgacctggtagccatcgaagccaagctgagcgacctgcaaaaagaggcagaa
aagctggaatcggagcatcctgaccaggcacaggctatcctttcgcggctcgcggaaatc
aatgatgtgtgggaagagatgaagaccaccctgaagaaccgggaagagtcgcttggagag
gcaagcaaactgcagcagttcctcagggacctggatgacttccagtcttggctgtccaga
acgcagaccgccatcgcatccgaagatatgccaaacacgctgaccgaggctgagaaactg
ctcactcaacacgagaatattaagaatgaaatcaacaattacgaggaagattatcagaag
atgagggacatgggtgagatggtgacacaagggcaaactgatgctcagtacatgttctta
cgccagcgcctgcaagctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcacgcctaccagctgtttctcagagacaccaagcaa
gcagaagcatttcttaataaccaggagtacgttctggcgcacacggagatgcccactacc
ttggaaggagcagaagctgccattaaaaaacaggaggatttcatgaccacgatggatgcc
aacgaagaaaagatcaatgcggttgtagagactggcaggaggctggttagcgatgggaac
atcaactccgacaaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaggataacagggatcttcagaagttt
cttcaggattgtcaagagctctcgctctggatcaacgagaagatgcttacagcccaggat
atgtcctatgatgaggcgaggaacctgcacagcaaatggctgaagcatcaggcgttcatg
gcagaacttgcgtccaacaaagaatggctggagaagattgaaaaggagggaatgcagctt
atcgcagagaaaccagagactgaagccgtagtgaaagaaaagctgacgggcctccatcag
atgtgggaagagcttgaatccactacccagaccaaggctcagcgtctctttgatgcgaac
aaggcggagcttttcacccagagctgtgctgatctggataagtggctgaatggtttggag
agtcagattcagtcggacgactacggaaaagatctcaccagtgtcaacatcctgttgaag
aagcagcagatgctagagaatcaaatggatgtccgtaagaaggagatcgaggagctgcaa
agccaggcacgggctttaagtcaagaagggaagagcacagatgaagtagacggcaaacgc
cttactgtagaaaagaaatttttggagctgttggaacctttgaatgaaagaaaggcaaac
ctgctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaatcttgtgg
gtcggagagaggatgcctatagctacatctactgatcatggacacaaccttcagactgtg
cagctactaataaagaaaaatcagacccttcagaaggagatccagggacatcagcctcgt
atcgatgacatttttgagaggagtcaaaacatcatcacagagagtagccctaatgctgaa
gcgattcagcagagacttgcggacttgcagcagctgtggaacctcctaatcgaggagagt
gagaaacgccacaggcgcctggaggagtctcacagagcgcagcagtattactttgatgct
gccgaggctgaggcctggatgagcgagcaggagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcggtgtccatgctgaagaaacaccagattttggaacaggctgta
gaagactatgctgagactgtgcaccagctgtcaaagaccagcagaactttggtggcagat
aatcacccagaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgcg
ggcctgaaggacctggccgaagagcgccggggcaagctggacgagagacacaggctgttc
cagctgaaccgcgaggtggacgacctggaacagtggatcgctgagagggaggtggtggcg
ggatcccacgagctgggacaggattacgaacacgtaacaatgctacaggagcgattccga
gaattcgcccgagacactggaaacattggacaggagcgggttgatacagttaaccacatg
gcagacgaactcatcaactctggacattcggacgctgcgacaatcgcagagtggaaggac
ggactcaacgaggcctgggctgatctcctggagctcatcgacacgagaacacaaattcta
gcagcctcttacgaactgcacaaattttaccatgatgccaaggagatcttaggacgtatt
caagacaaacataagaagctgcctgaagagctcggtagagaccaaaacacagtggaaaca
ctgcagagaatgcacacaacgtttgagcatgatatccaggcactcggcacgcaggtgaga
cagctgcaggaggatgccgcacgccttcaggccgcctacgccggagacaaagccgatgac
atccagaagagggaaaacgaggtcctggaggcctggaaggcgctgctggacgcctgcgag
ggccgcagggtgaggctggtggacactggagacaaattccgtttcttcagcatggtgcgt
gatctcatgctttggatggaagacgtcatccgacagatagaagcccaagaaaagccaagg
gatgtttcatctgttgaactactaatgaacaatcaccaagggatcaaagcagaaatcgat
gcccgaaatgacagctttactacctgcattgagctgggcaaatctcttctggcaagaaaa
cactacgcatccgaggagatcaaggaaaagctgctgcagctgacagaaaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattctggaggtgcaccag
ttttcaagagacgcgagcgtggctgaggcctggctgctgggacaggagccctacctctcc
agtcgggaaataggtcaaagtgttgatgaagtggaaaaattaattaagcggcatgaagca
tttgaaaaatccgcagctacttgggatgagagatttgcagcactggaaagactgaccacg
ttggaactgctggaagtccgtcggcagcaggaggaagaggagaggaagaggcagccgccc
acgccggagcccagccccaaggctgcggaggacgccgactcccagcagcagtgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtg
gcggaaactgcagaaaccaacgaaatggtcaacggagctgcagaacaaaggacaagttcg
aaagagtcgagcccggttccttccccaacggcagaccgcaaagccaagaccgccgtccag
gcccagactgctgctaccctgccagccaaaacacaggagattcctttggctcagatggag
ggcttcctccatcgcaaacacgagtgggagacgcacagcaagaaagcctccagcagatca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcgaaa
gctgctgcttctggcatcccctaccacaatgagattcctgtcagcttgaaggacgcagtc
tgtgaaatagcggtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaacgaatacctcttccaagccaaagatgatgaggagatgaacacgtggatccaggcc
atcacatcagcgatctcttcggataaaatcgaagtgtccccgaccacacagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccct
ggcaagcgggagaaggacaaagagaaagacaaagagaaaagattcagcctttttgggaaa
aagaagtga
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integrated database retrieval system
