Caloenas nicobarica (Nicobar pigeon): 135986688
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Entry
135986688 CDS
T11056
Symbol
SYNJ2
Name
(RefSeq) synaptojanin-2 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00562
Inositol phosphate metabolism
cnic01100
Metabolic pathways
cnic04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
135986688 (SYNJ2)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
135986688 (SYNJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135986688 (SYNJ2)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
135986688 (SYNJ2)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
135986688 (SYNJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
135986688
NCBI-ProteinID:
XP_065487040
LinkDB
All DBs
Position
3:complement(64650556..64717656)
Genome browser
AA seq
1508 aa
AA seq
DB search
MALSKALRLLWKQEPAPSALLEARTRQDCLLLEAGTVAALTPEEKDAIKGQYEKLLDAYG
CLGELQLKCGNARLHFLVLVTGCTSVGKILDAEVYKITATDFCPLQEETKEDERVTALKK
ILNSGMFYFSWPNAGSNFDLTVRAQKQGDNLYESGNSFFWNQLLHVPFKHYQVNCSDWLL
KVICGVVDIRTVYASHKKAKACLISRISCERAGARFHIRGVSDDGHVSNFVETEQTIYLD
DDVSSFVQIRGSVPLFWEQLGLQVGSHHLRLNRGLEANAPAFDRHMMLLKEQYGKQVIIN
LLGSRGGEEVLNRAFKKLLWASSHAADTPMINFDYHQFAKGGKTEKLENLLRPQLKLHWE
DFGIFTKGENVSPRLQTGTFRMNCLDCLDRTNSVQSFVALEILLAQLESLGLNSKSIIER
FVESYKAMWSLNGHNLSRVFTGSRALEGKHKVGKLKDGARSVSRTIQSNFFDAVKQEAVE
LLLMGDFFSEEYADKGKMLMDHTALLVTPSILKAMSERQFEFTSFKRVRVATGTWNVNGG
KQFRSNILGTSELTDWLLDSPKLSGVSEFQDDENCTPDIFAVGFEEMVELSAGNIVNAST
TNRKMWGEQLQKAISRTHRYIQLTSAQLVGVCLFIFVRPYHVPFIRDVAIDTVKTGMGGK
AGNKGAVSIRFQFYSTSFCFICSHLTAGQTQVKERNEDYKEITQKLSFPMGRSVFSHDYV
FWCGDFNYRIDLTYEEVFYFLKRQDWKTLLEFDQLQQQKSSGKIFKDFHEGTINFGPTYK
YDVGSEAYDTSDKCRTPAWTDRVLWWRKKLPFEKTAGEINLLDSDLNAETKVRHTWTPGA
LMYYGRAELQASDHRPVLAIVEVEVQEVNQAARESVFQEVSSFQGPLDATVVVNLISPTP
EEKNEFPEDLRTELMQMFEDYGTIVLVRISGGQMLVTFADSKSALRVMDIDGAKVKGRTV
KIRPKTKDWLKGLQEEIARKRDSIAPMSPTANSCLLEENFDFTSLDYESEGDIVEDEDDY
LDDVVADTAEDVPEDCGHFASIHHSNKSGQNPQLYKDDTDLADLKRELEGSGERRRRPPS
RSLSIPTRPRPLQPPQRPPPPAGTSGKKSSSDGSLSPGSHSTCSILATAKLLPGAPQQPP
KVRTGISKPYNVKQIKTTTAEEAEEAIRCLMEAKGGLQEDALKPAPTRNQAFTKPEPPPS
ITKSASLPGLQVGPALVPHRPPPKVPTTKKPVPLQRTGVKAENAVSAEEQFDPQTVQFPF
GLPEPCLEARPILSPTKVTPVPKPRTPQPGKPQESRGSSEKQPLSGSTAEAITVPPQNAS
FAPKVPPRRKKSAPAALHLQVLQSSDNPLFSGLTFNYNNNNPGFCSQTQDSHIPVQSGLS
AHPSSASPEHNTAEQLAPSTAKVMVNLQGPPLPEGQHPQLSDTSSLPENTNLLHLDMDSS
SPLSIQAASTTSAHTPENSKLPSLKDFSHWVTFSDDEDSSALSEGSKKLPVLEQNKNTLM
KTNTDLEL
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagcaaagcgctgcggctgctctggaagcaggagccggcgccgagcgccctg
ctggaggcgcgcacccgccaggactgcctgttgctggaggccggcaccgtggcggcgctc
actccagaagaaaaggatgcaattaaaggacaatatgaaaaactcctggatgcgtatggc
tgcttaggagagcttcagcttaagtgtggtaacgctcggctgcactttctggtcctggtg
acaggctgtacatcggtgggaaaaatcctggacgctgaagtttacaaaattactgcaaca
gatttctgtcctctccaggaagaaaccaaggaagacgagcgtgttactgccttgaagaaa
atactgaactctgggatgttctatttctcctggcctaatgcaggctcaaactttgacctg
acagtgcgggctcagaagcagggtgataacctctatgaatccggtaactcgttcttctgg
aatcagctgttgcacgtgcccttcaaacactaccaggtgaactgctctgactggttgctc
aaagtgatctgtggtgtagtggacattcgcactgtttatgcttcccacaagaaggcgaaa
gcctgcctcatctctcgcattagctgtgagcgggctggtgcccggtttcacattcgaggg
gtcagtgatgatggacatgtgtctaactttgttgagacagagcagacaatttacttggat
gatgatgtctcttcctttgtgcagatcagaggttctgttccactcttttgggaacaactg
gggcttcaggtgggttctcatcatctaaggcttaacagaggtctggaagctaatgctcct
gcctttgacaggcatatgatgcttctgaaggagcagtatggaaaacaagtgatcattaac
ctgttgggaagcagaggaggagaagaggtgctcaacagagcttttaagaaactgctatgg
gcctcttcccatgcagcagacactcccatgataaactttgactaccaccaatttgcaaaa
ggtgggaaaactgagaaactggaaaatttgctgaggcctcagctgaagttgcactgggaa
gactttggaatcttcacaaagggcgagaatgtaagtccacgtctgcagacaggtactttt
cgaatgaattgtctggactgcctggatcgtacgaatagtgtacagtccttcgttgcactg
gagatcctgcttgctcaattagagagccttgggttgaactctaaatctataatcgagcga
tttgtggaatcctacaaagcaatgtggagtctcaacggtcataatctgagcagagtattt
actggcagtcgtgccctcgaggggaagcacaaggttgggaaactgaaggatggcgcccgc
tctgtgtctcgcacaattcagtcaaatttttttgatgcagtaaagcaggaagccgtcgag
ttgctgctcatgggtgactttttcagtgaggaatatgcagacaaaggcaagatgctcatg
gaccacactgcactgctggtaactccaagtattttgaaggccatgtcagagcgtcagttt
gaattcacaagcttcaagcgtgttcgtgttgccacgggaacgtggaacgtgaacggaggg
aagcagtttcgaagcaacatcctcggtaccagtgagttgacagactggctgctggattct
cccaagctctctggagtttctgaatttcaggatgatgaaaactgcactcctgatatattt
gcagtaggatttgaagagatggttgaattaagtgcagggaatattgtaaatgccagtaca
acgaatagaaaaatgtggggagagcagcttcaaaaagctatttccaggactcatcgctac
attcagctgacatcagcacagcttgttggtgtttgtcttttcatctttgtacgaccttat
catgttcccttcatcagggatgtagcaatagatactgtgaagacaggaatgggaggaaaa
gctggaaataaaggggcagtgagcattcgttttcagttctacagtaccagtttctgcttt
atatgcagccacttaactgctgggcagactcaggtgaaagagaggaatgaagattataaa
gaaatcacacagaaactcagcttcccgatggggcggagcgtgttctcacatgactatgtc
ttctggtgtggtgactttaactatcgcattgatctgacgtatgaagaagtcttttatttt
ctcaaacgtcaagattggaagacacttttggaatttgatcaactacaacagcaaaaatcc
agtggaaaaatttttaaagacttccatgaagggactattaattttggaccaacatataaa
tatgatgttggctcagaggcttatgatacaagtgataagtgcagaactccagcttggact
gacagagtgctttggtggagaaagaagctgccttttgaaaaaacagctggggagatcaat
cttctagacagtgatctgaatgctgaaactaaagtcaggcacacctggacccctggagcc
ttgatgtactatgggagagcagagctgcaagcatctgaccacaggccagtgttagctatt
gtcgaagtggaagttcaggaagttaatcaagctgcccgtgagagtgttttccaggaagtg
tcatctttccagggaccactggatgccacagtagtggtaaatctcatatcaccaacacct
gaagagaaaaatgaatttcctgaggacttgcgtacagagcttatgcaaatgtttgaggat
tatggcactattgttctggtcaggatcagtggaggtcaaatgctggtgacatttgcagac
agcaagtcagcccttcgtgttatggatatagatggtgccaaagtcaaaggcagaacagtg
aagatccgacccaagaccaaggactggctaaagggccttcaggaggaaattgctcgaaaa
cgggacagcattgcccccatgtcccccacagcaaactcctgtcttctggaagaaaatttt
gacttcacaagtttggactatgaatcggaaggtgatatagtggaggatgaagatgattat
ttagatgatgtggtagcagacactgcagaagatgtgcctgaggactgtggacatttcgca
tccatacatcattcaaacaaatctggacaaaacccacagctgtataaagatgatacagac
ctggccgatttgaagcgagagctggagggaagcggggaacgccgccgccggcccccaagc
aggtctctgtccattcctaccaggcctcggccacttcagccgccacagaggcctccccct
cctgctggaacatcaggcaaaaagtcctcctcagatggttccctctctccaggaagccac
tccacctgctccatcctggcaacggcaaagctgctacccggagcccctcagcagccacct
aaagtccggactggaataagcaaaccttacaacgtcaagcagatcaaaaccaccacagct
gaggaagcagaagaagccattagatgtcttatggaagcaaaaggaggactacaggaagat
gcactaaagcctgctccaactagaaaccaagcgttcaccaaacccgagcctcctcccagc
atcacaaagtcagcatcattgccagggttgcaggtgggaccagcgctggtgccccatcgc
ccaccacccaaagttccaactaccaagaagccagtacctctgcaaaggaccggagtcaag
gcggaaaacgctgtgtctgcagaagagcaattcgacccacagacagtacagtttcctttt
ggcttgccagagccctgtctagaagccagacctattcttagtccaaccaaggttacgcca
gtccctaaacccagaacaccacaacctgggaagcctcaggagagcagggggagcagtgaa
aagcagcccctctcaggaagcacagctgaggccatcacagtgcctccccagaatgcttcc
tttgccccaaaggtgccaccacgaagaaagaagtcagctcctgcagctcttcatctgcaa
gttctccagagcagtgacaacccactttttagtgggttaacgttcaactataacaacaac
aatcctgggttctgctcccagactcaggactctcacatccctgtgcagtctggtctctca
gctcatccatcctctgccagcccagaacataacacagctgagcagttggcaccaagcact
gcaaaagtaatggttaatcttcagggcccacctctgccagagggccagcacccacagctc
tcagataccagctcccttccagagaacaccaatcttttgcacctggacatggattcatcc
agccctctttccatacaggcagcatcgactacttcagcacacactccagaaaattcaaaa
ctccccagcttgaaagatttcagtcactgggtcacatttagtgatgatgaagacagtagt
gcactgtcagaagggtccaaaaaactgcctgtcttagaacaaaacaaaaataccttgatg
aagacaaatactgatttagaattgtaa
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integrated database retrieval system
