Caloenas nicobarica (Nicobar pigeon): 135986898
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Entry
135986898 CDS
T11056
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnic03400
]
135986898 (GEN1)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135986898 (GEN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
135986898
NCBI-ProteinID:
XP_065487511
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Position
3:complement(12394672..12414246)
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AA seq
949 aa
AA seq
DB search
MGVTNLWQILEPVRQPVSLSSLKGKTLAVDLSLWVCEAQTVKKMIGVVTKPHLRNLFFRI
SFLTSMGIKLVFVMEGEAPKLKADTMSKRNEMRYGPSKKVGAARTGRSLFKAMLKECLEL
LECLGVPWVQGAGEAEAMCAYLNAKGHVDGCITNDGDVFLYGGQTVYRNFAMNAKDPYLD
CYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIDTLQGQNLLQRFEQ
WKEQFQYDNNPPLVVKRVIHCSECQHPGSYKEHEHSGCKFCDSTKYCKPSNSKFCCPCEW
HQLERTKQASAVEDNIRKKANSCEGFPFSEVIQEFLVNKDKLIKIKECRRPNLLSFQIFA
SEKMEWPKHYACKKLLVLLTHYDMIQRKAGYVDSKQLQAIRIIKTRVKNGIPCFEIEWQK
PEHYVDAEDEPVELFVVTVEEESLFQAAYPDVVTLYLMEKTEVLKKKQKNRKDRPKEKEL
SDVYDEVSDLLSQMNLKSRCGILPVQDSRYKDIKTPPEDQIHQRNTESKDAVLAAASCTT
TVQMPASAAALPLTTSHYSLLQCTLADSSVLPAQFTKNSGISSSSSVTAGLRLSSIDWEG
TLFSTSPAHGSDNHDPGPGLTACIKHLHPLGHEAARNSSEYSDAEQSDQQHSDSADDSVS
DDAMGHLHKWSLSERILKKTSIPSNPSLSEDVVQLESLKCFKQTKETVNPDKDYISSSCQ
LNKLVQESKKVLSENYTRESSVHICQDQYKKADSLAEIMQNDHSVSDSTSLALSERTTKI
LHPGCEKFPVSQNPADVVTGCHIKKAYTQTSFKKSVCKNRCSSSEDSDDGNMNKNLQKKR
QLNPGQFKKCFTKKRDNVTSKRTNSDSALIIKGNKKKTNLKKPVNSLSLQVSPNPSFVGE
DDCFQSPKQPFERSGSGPTQQAETAILTSAWADSPLPLSERLKGRIKTN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactaatctgtggcaaatccttgagcctgtgagacaaccagtcagcttgagc
agcctcaaaggaaaaacacttgctgttgatctcagtctgtgggtttgtgaagcacagact
gttaaaaagatgattggagtagttaccaagccacacctgagaaacctattttttcggatc
tctttcttaacatcaatgggaattaaactagtgtttgtcatggaaggagaggcccccaag
ttgaaagcagacaccatgagtaagaggaatgagatgcgctatggaccttcaaagaaagtt
ggagctgcaagaacagggagatctttatttaaagccatgttaaaagagtgtctggaactg
ctggagtgtttaggtgtcccttgggttcaaggagccggggaagcagaggcgatgtgtgcc
tacctaaacgcaaaaggacatgttgatggctgcattaccaatgatggagatgtcttttta
tatggaggtcaaacagtttataggaactttgctatgaatgcaaaggatccgtatcttgac
tgttacacaatgtcctctattaaggagaagcttggttgtgacagagagtctttgattggg
ctagccgttcttctgggttgtgattatcttccaaagggtgttccaggagttgggaaagaa
caagctttaaagttaattgatactttgcaaggtcagaacttgctgcaaaggtttgagcaa
tggaaagaacaatttcagtatgataataatccacctctggttgttaaaagggtaattcac
tgttctgagtgccaacatccgggttcttacaaggaacatgagcacagtggatgtaaattc
tgtgacagcactaaatactgcaaacccagcaactccaaattctgctgcccttgcgaatgg
catcagttagagcgaacaaaacaagcaagtgcagtggaggacaatatcagaaaaaaagct
aacagttgtgagggctttccattctctgaggttatccaagaatttcttgtaaacaaggat
aaattgatcaagataaaggaatgtcgaaggccaaatttattgtcctttcagatatttgct
tctgagaagatggagtggcccaaacattatgcttgtaagaaactgttagtgctattgacg
cattatgatatgatccagagaaaagctggatatgtcgattcaaaacaactgcaggcaata
cggataatcaagacacgtgttaaaaatggaattccttgttttgaaattgagtggcaaaaa
ccagaacattacgttgatgcagaagatgagcctgtggagttgtttgtagtcacagtagaa
gaggagtccttgtttcaggctgcttatcctgatgttgttaccctttatctaatggaaaag
acagaagttctgaagaagaagcagaagaacaggaaagacagaccaaaagaaaaggaatta
tcagatgtttatgatgaagttagtgatcttctgtctcagatgaatttaaaatctagatgt
ggaattcttcctgtgcaagactccagatataaagatataaaaactcccccagaagatcag
atacaccagagaaatactgaatcaaaagatgcggtgttggctgcagcttcctgcacaaca
actgttcagatgccagcatcggcagctgctctgcctctgaccacatcacattactcgctc
ttacagtgtacgttggctgactcatctgtattgccagcacaatttactaaaaattcaggg
atatcatcatcttcctctgtaacagctggtctacggctgagcagtattgattgggaagga
accttgttcagcacttcaccagcccatgggagtgataaccatgatccaggacctggctta
actgcatgcataaaacatttgcatccactaggtcatgaagcagcaagaaatagctcagaa
tattctgatgctgagcagtctgatcaacagcattctgatagtgcagatgattcggtttca
gatgatgctatggggcaccttcataagtggtctttaagtgagcgaatacttaagaagact
tccattccatcaaacccttcattgtctgaagatgtagtgcaactggagtctttgaaatgt
tttaaacaaacaaaagaaacagtgaatcctgataaagattatatctcttcctcatgtcag
ttaaataaactagtgcaggaaagtaaaaaagtgctatcagaaaactatacaagggaatcc
agcgtgcatatttgtcaagatcagtacaaaaaagctgacagcctggctgaaattatgcaa
aatgaccatagtgtaagcgattcaacatctctagccctcagtgaaagaacaacaaagata
ctgcatcctgggtgtgaaaagtttcctgtgtctcaaaacccagcagatgttgtaactggc
tgccacattaaaaaagcctatactcaaacttcatttaaaaagagtgtgtgcaagaacaga
tgttcttctagtgaagacagtgatgatgggaacatgaataaaaacctgcagaaaaaaagg
caactgaaccctggtcagtttaaaaaatgttttacaaagaaaagggataatgttactagc
aaaagaactaacagtgactcagccctcataattaaaggaaataagaaaaagaccaattta
aaaaaacctgttaatagtttgtcattgcaagtatctccaaacccttcctttgtaggggaa
gatgattgtttccaaagcccaaagcaaccatttgagaggtcaggttctggtcctactcag
caagccgaaactgccatcctgacttctgcgtgggcagacagtccccttcccctgtctgaa
agactaaagggaagaatcaaaaccaattag
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