Caloenas nicobarica (Nicobar pigeon): 135986928
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Entry
135986928 CDS
T11056
Name
(RefSeq) vesicular inhibitory amino acid transporter-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
135986928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135986928
Transporters [BR:
cnic02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
135986928
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
135986928
NCBI-ProteinID:
XP_065487554
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Position
3:complement(57502128..57525991)
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AA seq
486 aa
AA seq
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MAHLKQAFSSLFNCFRETRSLLLGTVRWDSCLDTDEEHLNFARRDELNRTHSEEGEETDG
PLNFELGVCHQDPEHKSPALLPHAQVKLITSWEAGWNVTNAIQGIFVLGLPYALLHSGYS
GLFLIILAAALCCYTGKILIACLYEENEDGQLVRVRDTYEDIANACCKKLSPKLGGIVVN
VTQVMELIMTCVLYLIVSGNLLSHSFPYIPVTEKTWSVIAFATLLPCVFIKTLKIVSKLS
QLCSLVHFVIILVVMTYCVTRIHQWSWAKFRLSIEFEDFLVSVGVIIFSYTSQIFLPTLE
GNMKNPEEFGCMLNWTHFFACVSKTTFALTAFLTWGEETKEVITDNLPSFLQTLVNLCLL
TKALLSYPLPFFAATEIVYACISRGNCSNYRSPLFALGVRGSFLLLTLLMAMFIPHFALL
MGLTGSVTGAAMTFLLPSLFHLKLKWKKLSFLEKCADISGFILGFLCSLAGIVCSIKGLL
EVFGGV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctcacctgaaacaggctttttcatctcttttcaactgctttagggaaacacgatct
ctccttttgggaactgtgagatgggacagttgcctagacactgatgaagagcatttgaat
tttgctagaagagatgaactgaatagaactcacagtgaggagggagaggaaacagatgga
cccctgaactttgagcttggtgtttgccaccaggatccagaacacaagtccccagctctc
ctgccacatgcccaggtcaaactgatcaccagctgggaagcaggatggaatgtgacgaat
gccattcagggaatatttgtcctaggattgccgtatgctcttcttcacagtggatacagt
ggcctgtttcttattatcttggctgcagcactatgctgttacacaggcaaaattctaatc
gcttgcttgtatgaagaaaatgaagatgggcagcttgtaagagtgagagacacgtatgaa
gatattgcaaatgcctgctgcaaaaaactgtctcccaaactaggtggtatagttgtcaat
gtgacccaagtgatggaactgatcatgacgtgtgttttgtatctgattgttagtgggaat
ttgctgtcacacagttttccatacataccagtgactgagaaaacttggtctgtaattgca
tttgctacactgctgccttgtgtattcatcaagactctcaaaattgtttccaaactcagc
cagctttgctccttggtccattttgttatcatccttgtagtgatgacttactgtgtcaca
cgaatccatcagtggtcctgggcaaaattcagactctccattgagtttgaggacttcttg
gtgtctgtaggtgtgataattttcagttacacttcacaaatatttcttcccacacttgaa
ggtaacatgaaaaatccagaggaatttggatgtatgctgaattggactcacttttttgct
tgtgtctcgaaaacaacctttgcactgactgcattcttgacctggggtgaagagacaaag
gaagttatcactgacaacctgccatcatttcttcaaaccctagtcaatttgtgtctctta
accaaagctctcctttcttaccctttgcccttttttgcagccacagaaattgtgtatgct
tgtatttctaggggcaactgttccaattacagatctccactatttgctctgggtgtaaga
ggctcatttctcttgttaactctgctgatggctatgttcataccacattttgccttgttg
atgggtttaacaggcagtgtaacaggtgctgctatgacttttcttcttccttctctcttc
catttaaaacttaaatggaaaaaactgtccttcttagagaaatgtgcagatatctctggt
tttattttgggtttcctttgtagccttgcaggcatagtttgctcaataaaagggctgctt
gaagtatttggaggagtgtaa
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