Caloenas nicobarica (Nicobar pigeon): 135987290
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Entry
135987290 CDS
T11056
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04150
mTOR signaling pathway
cnic04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135987290 (LRP6)
04150 mTOR signaling pathway
135987290 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135987290 (LRP6)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
135987290 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
135987290
NCBI-ProteinID:
XP_065488163
LinkDB
All DBs
Position
1:73545173..73669175
Genome browser
AA seq
1612 aa
AA seq
DB search
MGAVLRSLLACSFCSLMRAAPLLLYANRRDLRLVDAANGKENATVIVGGLEDAAAVDFVF
VKGLIYWSDVSEEAIKRTEFNKSGSVQNVVISGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSIIVNTD
IYWPNGLTLDYEEAKLYWADAKLNFIHKSNLDGSHRQAVVKGSLPHPFALTLFGDTLYWT
DWNTHSILACSKYSGEDLREVHSNIFSPMDIHAFSQKRQPNATNPCGINNGGCSHLCLMS
PTKPSYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLPLEDIR
HAIAIDFDPLEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD
RIVLVNTSLGWPNGLALDYAEGKIYWGDAKTDKIEVMNADGTGRRVLVEDKLPHIFGFTL
LGDYVYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGTNPCAEDNGGCS
HLCLYRPQGLRCACPIGLELINDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
TERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREIIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGDQDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREVLFFSGLSKPIALAIDSQLGKLFWADSDLRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDRQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNIQ
EYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDEKNCPVCSDTQFQCESGQCIESALRCNGEANCQDNSDEK
NCEVLCLSDQFRCASGQCIGKSKKCDHNLDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGV
ILTVFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSVISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVTAATAKGYTSDLN
YDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtcctgcgcagcctacttgcctgcagtttttgttccctgatgagagctgcc
ccactgttgctgtacgcgaaccgacgtgatctgagactggtggatgctgcaaacgggaag
gagaacgccacagtgattgtgggtggcttagaggatgcagcagcagtggacttcgtgttt
gtaaaggggttgatatactggagtgacgtaagtgaagaagccatcaaacgaacagaattc
aataaatctgggagtgtacaaaatgtggtcatttctggacttctgtcacctgatgggctg
gcatgtgactggctgggagagaaattatactggacagattctgaaacaaataggattgaa
gtttctaatttagacggatcactgagaaaagttttgttttggcaagaattggatcaaccc
agagcaattgccttagatcctgcaagagggttcatgtattggacagactggggagaagta
cccaagatagaacgtgctgggatggatggttcgagccgctccattatagttaacacggac
atatattggccaaatggactgacgctggattatgaggaagcgaaactttactgggcagat
gctaaactgaatttcatccacaaatcaaatttggatggaagtcacaggcaagcagtggtt
aaaggctcccttccacatccttttgctttgacactatttggggacacgttgtactggact
gactggaacacgcattcgatcttggcctgcagcaagtactccggggaggacctgcgtgaa
gtacattccaacatcttctctcccatggatatccatgccttcagccaaaagaggcagcca
aatgctacaaacccatgtggaattaataatggtggctgctcccacttgtgtttgatgtct
cctaccaagccctcttatcagtgtgcatgtcccactggtgtgaaacttcttgagaatgga
aagacctgcaaagatggtgctactgaactgctgcttctagcccgccggacagatttgagg
cgaatttccttagacaccccagattttacagacatcgttttgccactggaggacatccgt
catgccattgccattgactttgatcctctggaaggatacatctattggaccgatgacgaa
gttagggcaatccgccgctcgttcatcgatgggtcaggtagtcagtttgttgtcacagca
cagatcgcacatcccgatggcattgctgtggactgggttgcccgaaatctgtattggact
gacactggtacagaccgcattgaagttacaaggcttaatgggaccatgagaaaaatcttg
atatcagaagacctggaagaacccagagctattgtgctggatcccatggttgggtacatg
tactggaccgactggggagaaatcccaaagatcgagagggcagcattagatggctcagac
agaattgtgctggtgaatacctctcttggctggccaaacggactggcgttggattatgca
gaaggcaaaatatactggggagatgccaaaacagacaaaatagaggtcatgaatgctgat
ggaactgggagaagagttctggtggaggacaagctgcctcatatctttgggttcacattg
ctgggagactacgtttattggacagactggcaaagacgcagcattgaacgtgtgcataag
cgaacagcagaaagagagatcatcatagatcagctacctgatctaatgggcctgaaagct
acaaacgtccaccagatcattggtacaaacccttgcgcagaggataacggcggctgcagc
cacctttgtctgtacagaccccaaggccttcgctgcgcttgccccataggcttagagctc
atcaacgacatgaagacctgcatcgtcccagaagctttcctgctgttttctcggagagca
gatatcaggcgaatctctttggaaacaaacaacaacaacgttgctattccactcactggg
gtcaaggaagcttctgctctggattttgatgtaacagacaatcgaatttactggactgac
atttcactgaagaccatcagcagagcatttatgaatggcagcgcactggaacatgttgtg
gagtttggcttggattacccagaaggcatggctgtggattggctgggcaagaacttgtat
tgggctgacactggaacaaatcgtatagaagtggcaaagctggatgggcagcatcgccaa
gtgctggtgtggaaagatctcgacagtccccgggcattggccttggaccctgctgagggg
tttatgtactggactgaatggggtggtaagccaaagattgatagagctgctatggatggc
accgagaggacgactctggtaccgaacgtgggacgtgctaatggcctaactattgattat
gctaaaagacggctgtactggactgaccttgataccaacctgatagaatcctccaacatg
ctaggccttgaccgtgagattatagccgatgacttgcctcacccatttggcttgactcag
tatcaggattacatttactggactgactggagccggcgtagcattgaacgagccaacaag
accagcggccagaaccgaaccatcatccaagggcatttggattatgtgatggacatcttg
gtcttccattcctccaggcaggccggctggaatgagtgcgcctccagcaatggtcactgc
tcccacctgtgcttagctgtccctgttggtggctttgtctgcggctgcccagctcactat
tccttgaactctgacaacaggacttgtagcgctcctacaacctttctgttgttcagtcag
aagaatgcaattaatcgcatggtgatagatgagcagcagagtccagatatcatactccct
atccatagcctcaggaatgttcgagccattgattacgaccctctggataagcagctctac
tggattgattctcgtcagaatattatccgcaaggcacaggaagacggcagccagagcctc
actgttgtgacaagtccagttcccaatcagaacctagatatgcagccttatgacctgagc
attgacatctacagccgctatatctactggacctgtgaagctactaatgtgatcaatgtg
acccgcctggatgggagacccatgggagtggtgctcaaaggagatcaagataggcccagg
gccattgtggtgaatccagagaaaggatacatgtatttcaccaacctacaggaaaggtct
cctaaaattgagagagcagcattggatggaactgaacgagaggtcctttttttcagtggt
ttgagcaagcccatagccttagctattgacagccagctaggcaagttgttctgggctgat
tcagacctgcggagaattgaaagcagtgacctttcaggtgctaaccggattgttttggaa
gactctaatatcttgcagcctgtgggactaactgtatttgaaaactggctgtattggatt
gacaggcaacaacagatgattgaaaagattgatatgactggtcgcgaaggacgtacaaag
gtccaagctcgcattgcacaactcagtgacatccatgctgtgaaagagctcaacattcag
gaatacagacaacatccttgttctcaagataacggtggctgctcgcacatttgcatcgtg
aagggcgatggcaccacacgctgctcttgccccgtccaccttgttctgctgcaggatgag
ctgtcctgcggagaaccaccaacatgctcgcctcagcagttcacctgtttcacaggtgag
attgactgcatcccggtggcctggcgctgcgatggtttcactgaatgtgaggaccacagt
gatgaaaagaactgcccagtgtgctcagacacccagttccagtgtgaaagtggacagtgc
atagaaagtgcccttcggtgcaatggagaagcaaattgccaggacaactcagatgagaag
aactgtgaagtgctttgtttaagcgatcagttccgctgtgccagcggtcagtgcattggg
aaaagcaagaagtgtgaccacaacttggactgcagtgacagctcagatgagcaaggatgc
tacacaacggaggagcctgcgccacagcccaacaacacaataggctcaatcattggtgtg
atcctgacagtttttgtggtcggagcaatgtacttcatctgccagagggtgctgtgccca
cgcatgaagggagatggggaaacaatgaccaatgattatgtggtgcacggaccagcctct
gtacctcttggttatgtacctcacccaagctccttgtcagggtctcttcctggaatgtct
cgaggtaaatctgtgatcagctccctcagcattatgggagggagcagtgggccaccctat
gacagggcccatgtcactggagcttcttccagtagttcttcaagtaccaaaggcacttac
tttcctccaattttaaacccaccaccttcaccagctactgaacgttcacattataccatg
gaatttggttattcttcaaacagcccatccactcatagatcctacagctacaggccttac
agctaccggcattttgcacctcccacgacgccctgcagcacagatgtctgcgacagtgac
tatgcccccagccgaagggtcacggcagcgacggccaagggctacaccagtgacttgaac
tatgattctgagcccgtccccccgccacccactcctcgcagccagtacctgtcggcagag
gagaactatgaaagctgcccgccctccccctacacggagcggagctactcccaccacctc
tacccgccgccgccgtccccctgcacggactcctcatga
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