Caloenas nicobarica (Nicobar pigeon): 135987417
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Entry
135987417 CDS
T11056
Symbol
ABCB10
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135987417 (ABCB10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135987417 (ABCB10)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
135987417 (ABCB10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA
AAA_25
AAA_29
AAA_21
AAA_16
AAA_5
AAA_30
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
135987417
NCBI-ProteinID:
XP_065488380
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All DBs
Position
3:77548291..77575221
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AA seq
741 aa
AA seq
DB search
MGGGGGSEAPPPAADPRGADRLQQQQHQPPPRLCRAGRMAGYAPRLPWLLPLLRRAAPPP
WARAAGGAAGLRAPPRPAGRCGPPPPSLPPPPPGAPSCSRLLLLPPAAPGSAPRSLSAAA
GAEPPAPPRGPAGVSPRSQARRLLALAHPERWRLTAAVGFLTVSSVITMSAPFFLGKVID
IIYTNPSEDFTDSLTSLCALLSGIFLCGAAANATRVYLMQTAGQRIVKRLRTTMFSSVLK
QETAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVGMMFFVSPSLAAF
VLSVVPPLAVMAVIYGRYLRKLTKMTQDSLAEATQLAEERIGNIRTVRAFGQEVAEMEKY
TNKVDYVLQLAKKEAVARAGFFGATGLSGNLIVLSVLYKGGLLMGSAYMTVGELSSFLMY
AFWVGISIGGLSSFYSELMKGLGAGGRLWELIERKPQLPFNEGITLSKDTFRGALEFNDV
EFAYPTRPETSIFKDFSLSIPAGSVMALVGPSGTGKSTIVSLLLRLYDPISGTITVDGFD
IRQLNPLWFRTKIGTVSQEPILFSCSIAENIAYGAEDPSTVTAEEIQKVAEIANAASFIR
DFPKGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALD
RLMEGRTVLIIAHRLSTIQNADFVAVLGQGKILECGKHEDLLANPNGLFRKLMQKQAFLQ
NSDTFALDLQSREEDVLKGNV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggcggcggctcggaggcgcctcctcctgccgcagacccgcgcggcgcggac
cggctgcagcagcagcagcaccaaccgccgcctcggctctgccgcgccggccgcatggcg
ggctacgcgccgcgcctgccctggctgctgccgctgctgcggcgggcggcgccgcccccc
tgggctcgggccgccggtggggccgccggcctccgcgccccgccgcgcccggccggcagg
tgcgggccgccccctccgtcgctgccgccgccgccgccgggcgctccgtcctgcagccgc
ctcctcctcctcccgcccgcggcgccgggcagcgccccgcgctccctgagcgccgccgcg
ggcgcggagccgccggcgccgccgcgggggccggcgggcgtctcgccgcgctcccaggct
cggaggctgctggccctggcgcaccccgagcgctggagactgacagctgctgttggtttt
ctgacagtttccagtgtcattaccatgtcagcccctttctttctggggaaagttattgac
attatttatacaaatcctagtgaagacttcactgacagcctgaccagcctgtgtgccttg
ctgagtggaatctttttatgtggtgctgctgctaatgctactcgtgtctacctcatgcag
actgcaggacaaagaattgtgaaacgtttgagaacaacgatgttctcctctgttctgaag
caagaaaccgctttctttgacaagaccagaacaggagagctgataaaccgcttatcttca
gatacagccctcttgggccgttcagtgactgaaaacctctcagatggtctcagggcagga
gcacaagcgtctgtgggggtcggaatgatgttttttgtgtctcctagccttgctgcattt
gttctgagtgttgtgccacccttggctgtcatggctgtgatttatggaagatacttgcga
aaacttactaaaatgacccaagattctcttgcagaagcaacacagttagctgaagagcgt
attggaaacataagaacagttcgagcttttggacaagaagtggctgaaatggagaagtat
acaaataaagttgattatgtgctacagctggctaaaaaagaggcagtagctcgggcaggc
ttctttggagcaactggcctttctggaaacttaattgtcctctcagtcttatacaaagga
ggattactaatgggcagtgcctacatgacagttggtgaactctcatctttcctgatgtat
gctttctgggttggaataagcattggaggtctaagttccttttattccgaactaatgaaa
ggactaggtgctggtggacgtctatgggaacttattgaaaggaagccccaactgccattt
aatgagggaatcacattaagcaaagatacattcagaggtgctttggagttcaacgatgtt
gagtttgcatatccaacacgtccagaaacatccattttcaaagattttagcctttccatt
ccagctggctctgttatggctctggttggcccaagcggtacagggaaatcaactattgta
tcccttctgctgaggctgtatgatcctatctcaggtactatcactgttgatggctttgat
atccgtcagttaaatccactgtggttcaggacaaagattggaacagtgagtcaggaacca
attctgttctcctgttctattgctgaaaatattgcctatggtgcagaggatccttccact
gtgactgcagaggagattcagaaagttgctgaaatagctaatgctgctagtttcatcaga
gattttccaaaaggatttgacactgtagttggagaaaaaggcattttgctttcaggtgga
cagaagcaacgaattgcaattgctcgagctctgctcaagaatcctaaaattcttctgtta
gatgaagcaacaagtgctttggatgctgaaaatgagtatctggtgcaagaagctctggac
cggttgatggaggggaggacagtcctaattattgctcatcgtctgtctactattcaaaat
gctgattttgttgcagtccttggccagggtaaaattcttgaatgtggaaaacatgaagac
ctacttgcaaatccaaatggacttttcagaaaactaatgcagaaacaagcttttcttcaa
aacagtgatacttttgcattagatttacaatccagagaagaggatgtattaaaaggaaat
gtatga
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