Caloenas nicobarica (Nicobar pigeon): 135987448
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Entry
135987448 CDS
T11056
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04510
Focal adhesion
cnic04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135987448 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135987448 (LAMB4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
DUF8003
Motif
Other DBs
NCBI-GeneID:
135987448
NCBI-ProteinID:
XP_065488439
LinkDB
All DBs
Position
1:complement(16080504..16121775)
Genome browser
AA seq
1808 aa
AA seq
DB search
MRLGLAILLHLTLVRLRHAQDDCDAGSCHPAVGDLLLGRSKRLTASSTCGMNSPQKYCIL
GYLEAEQKCFLCDSRYPYNPYTHHNSHMVENVITTFEPDRKKRWWQSENGINHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKAFRYFAQDCAASFPNIPSGPAKSVGD
IICDSRYSDIEPSTEGEVVLKALDPTFEIENPYVPHIQELITLTNLRINFTKLHTLGDAL
LGRRHSDPLEKYYYAVYEMVVRGSCFCNGHASQCAPVQNLRGDVFHQSGMVHGRCICHHN
TEGLSCERCKDFYNDAPWRPAEGAQDNACKRCNCNGHSGRCHFDMAVYQTSGGVSGGVCE
DCQDNTMGQHCDQCQRFFYQDPLKVISDPHACLPCNCDPEGTLHNGVCESRTDPALGTVA
GRCLCKENVEGVRCDKCRANYYRLSGSDPLGCQPCNCDPAGSLPFSICNPATGECLCQQF
ATGRRCEKCLVGYWGLGNSLHGCSPCDCDIGGSQNNLCSPKDGQCECLPNIMSRQCNEPA
PGYFFLPLDYYIYEAEHAKPLSGSAPLVKPSTLPRCDIYFQKQGYEFMVENGRIVLNRSK
KRSVRKSGLEQGAAQLGQDSAVSVVFRQPSTDRSVTWTGPGFARVPSGAGLRFAINNVPF
AMDFGITIRYEPESLEDWIASVAIQPAGILSSQHCKNKSLSQEPHVLPLPATKRIALLQT
PICLEPGTEYSVDVYFSQPSASDPKVKSFILIDSLGLIPRISSVENLCSEKDLDEYQKYH
CIEIASEVGPHILPKACARLIVSMSARIHNGAVACKCNPQGSLSASCSKLGGQCQCKANV
VGRCCDTCSVGSYGFGFHGCYACECHPQGSLSTLCDQVTGQCSCRREVDGQRCSRCLAGY
FGFPHCRPCPCNGYAELCDLVTGACLNCRGFTAGSHCERCMDGYYGNPLKGEACRPCMCP
GAPTSNRYFAHSCYQDSQSAQLVCSCLEGYSGDRCDECPSGFYKNPGSPGHGCAPCPCNN
NIDVTDPESCNRLTGECTKCLHNTHGANCQFCKPGYFGSALNQDCQKCTCNPAGVHPAMC
PGGDAACLCDPASGACPCLPNVVGTTCDQCAPGYWDLASGKGCQICDCDPKNSQSNQCNQ
LTGQCPCKPGYSGRCCDECEENYFGNPQTHCISCECNPEGTSQPMCDKATGACNCRAGVT
GRFCDKCGRGFEKDFPSCHRCHLCFDQWDTEITALAQTVQVLMRFAANLEDKGGRRPGCD
MRFKAFEDAISEIERILRHPVLSLEALSDIRDFQGYIQQKVAQMGPLHSPLYEFPDLNKN
IEDIGEEADLVYELLRQKIHLHQSFHYLNLQEAISNIRKHFEVSLLAERKTSGTTPVVRY
SEYTRNHTLAMLGRQALKASRVLEQLRSIESPNIQKLNEKICGVPGDQPCVTAACGGTLC
RDRHGLRQCGGPNCGGALPLSTDAFRKAEETALLLNNLTTQLREPENQVKSIRKMAEESK
LKGSQFKGQLERAKNQIEVDQEITKEFIRKVKDFLLDESAPPEDTEKVANYILQINLPLT
SQELTVMLDKIRSIMKPCEKYKLNASKRNRKREEAQTLLVEAQEADKAAKALLPVDEINN
KLKNVVKSQGRSKNTLIKLNEEIRAIRTQISQAENKVNKTNDELNDLSAKQSEMEDEIAT
LQAKMLMNKNQATKARAEAEAAHKQAQNIDNEFADIKRKYTILQENLKARVPPKVTLEKV
KQLKEAAEKLAEETERKIKRITDLEKKLRDLNQTKQDKAEQLRQLEEQVIAIKNEITEQE
SKYATCKS
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggggctggccatcctgttacacctcacgctggtaagacttcggcatgcacaa
gatgactgtgatgctgggtcctgccacccagccgttggggaccttctcctgggtcgcagc
aagcgattaacggcctcgtcaacctgtggaatgaacagccctcagaagtactgcattcta
ggctacctagaggctgaacagaagtgctttctctgtgattccagatacccatataatccc
tatacacatcacaacagtcacatggtcgaaaatgttatcacaacttttgagcctgatagg
aaaaaaaggtggtggcagtcagaaaatggcattaaccacgtcagcattaggttggaccta
gaaactttattccagttcagccatcttatcctgacttttaagacatttcgacctgcagcg
atgctggttgagcgctccaccgactttggtcagacctggaaagcatttagatattttgca
caggactgtgcagcttcttttcccaacatcccttctggtccagcaaaaagtgtgggagac
atcatttgtgattcaagatattcagacatcgagccctccactgaaggcgaggttgtttta
aaagctttggatcccacctttgaaatagaaaatccatatgtgccacatatccaagagctc
attacgttgacaaacctaaggatcaattttacaaaactccacacccttggggatgctctg
cttggaagaaggcacagtgatccccttgagaagtactactatgctgtctatgagatggtt
gtacggggcagctgcttttgcaatggccacgccagccagtgtgctcctgtgcagaatctg
cggggagatgttttccatcagtctgggatggtccatgggagatgtatctgccaccataac
actgaaggtttgtcctgtgaaagatgtaaagatttctacaatgatgctccctggaggcca
gctgaaggggcacaagataacgcttgcaaacggtgtaactgcaacggccactctggcaga
tgccactttgacatggctgtgtaccagaccagcggtggggtcagcggtggtgtttgtgag
gactgccaggacaacaccatggggcaacactgtgaccagtgtcaacgtttcttttaccag
gatccactcaaagtcatctcggaccctcatgcatgtctcccgtgcaactgtgacccagaa
ggtacattgcacaacggcgtgtgtgagagccgcacagatcctgctctgggaacagtcgcg
ggccggtgcctttgcaaggagaacgtggagggtgtccgctgtgacaagtgcagggcgaac
tactataggctgagtggcagcgaccctctgggctgccagccctgtaactgtgatcccgcc
ggcagtttgcctttctccatctgcaatccggccaccggagagtgtctctgccagcagttt
gccacagggcgacgctgtgaaaaatgccttgtgggatactggggtcttggcaacagcttg
catggctgttctccatgtgactgtgacattggtggatcccagaataacttgtgttcacca
aaggacggtcagtgcgagtgtcttcccaacatcatgagccgccagtgtaatgagccagcc
cctggctacttctttttacccctggattattatatttatgaagctgagcatgcaaagccc
ctttctggctctgcacccttggttaaaccaagcactcttccaaggtgtgacatctacttc
caaaagcaaggctatgagttcatggttgaaaatggaaggattgtgttaaacaggagcaag
aaacgaagtgtaagaaaatctggactggaacagggagcagcgcagcttggacaggactcg
gctgtgtcggtggttttcaggcagcccagcaccgaccggtctgtcacatggacaggacct
ggcttcgcccgcgttcccagcggagctggcctcagatttgccatcaacaacgttcccttt
gctatggactttggtataacgattcgttatgagcctgagtccttggaagactggatagca
agtgttgccatccagcccgctggtattttgtcaagtcaacactgcaaaaacaagagcctt
tcacaggaaccacatgtgttgcctctcccagctacaaagaggattgcacttctgcaaact
cccatctgcctggagccaggaacagaatattctgtggatgtgtatttttctcagccctct
gcctctgacccaaaggtgaaatcgttcatcttgattgactcacttggacttattcccaga
atcagctccgtggagaacttatgcagtgaaaaggatttagacgagtaccagaagtatcac
tgtattgaaatagcatcagaagttggacctcacatcctgcccaaagcatgcgcacggctc
atagtgagcatgtcagcccgtattcacaatggtgccgtcgcgtgtaagtgcaatccccaa
gggtcgctgagcgccagctgcagtaaactggggggccagtgtcagtgcaaagccaacgtt
gtgggacgctgctgtgacacttgctctgtgggcagctatggcttcggcttccatggctgc
tatgcatgtgagtgccaccctcaaggctcactgagcacgctgtgtgaccaggtgacaggg
cagtgctcctgccgccgggaggtggatggccagcgctgcagccgatgtctggctggctat
tttggatttccccactgccgcccttgcccatgtaacggctacgcggagctttgcgacctg
gtgactggagcatgcctgaactgccgagggtttacagctggaagccactgtgaaaggtgc
atggatggctattatggaaaccctctgaagggagaagcctgccgcccatgcatgtgccca
ggggcacctacaagcaataggtattttgcacattcctgttaccaggactcccagtctgca
caactagtctgcagttgtctcgaaggatattcaggcgatcggtgcgacgagtgtcctagt
gggttctacaaaaacccaggcagccctgggcatggctgtgcgccgtgtccctgcaataac
aacattgatgtgacagacccagagtcctgtaacaggctcaccggggaatgcaccaagtgt
ttacacaatacccatggagcaaactgccagttctgcaaaccagggtattttggctcagcc
ctcaatcaagattgtcaaaagtgcacgtgcaatccggcgggtgttcaccctgcgatgtgc
ccggggggggacgcagcctgtctgtgtgacccagccagcggggcttgcccgtgcctgccc
aacgtggtgggcacgacgtgtgaccagtgtgcccctggctactgggacctggctagtgga
aaaggatgtcagatctgtgactgtgatccaaaaaactcccaaagcaaccagtgcaaccag
cttacaggccagtgtccatgtaagccaggttacagtggaagatgttgtgatgaatgtgag
gaaaattattttggcaatccacagacacattgcatttcatgcgagtgtaacccggaggga
acgagccagcccatgtgtgacaaagccaccggtgcatgtaactgccgtgctggcgtcacc
ggacggttctgcgacaagtgtggccgtggctttgagaaagactttccctcttgccatcga
tgtcatctttgttttgatcagtgggacactgaaattactgccctcgctcagactgttcag
gtgttaatgaggtttgctgcaaatctcgaagataaaggaggacgaaggcccggctgtgac
atgcgcttcaaagcctttgaagatgccatttctgaaattgaaagaattttgagacatcct
gttctttcactggaggccctctcagacatcagggattttcagggctacattcaacaaaaa
gttgcacaaatgggtccccttcacagtccgctgtatgagtttcctgaccttaacaagaac
atagaagacattggggaagaagccgacctagtgtatgaacttctacggcagaaaatacat
ctgcaccaaagttttcattacttgaacctccaagaggccatcagcaacattaggaaacac
tttgaagtatcattgctggcagagcggaagaccagtgggacaacccctgttgtaagatac
tcagagtacaccaggaaccacacactcgctatgttgggacgtcaggccctgaaagcaagc
cgtgtgctggagcagctcaggagcatcgagagccccaacatccaaaaattgaatgaaaag
atctgtggtgtgccaggagaccagccctgtgtcacagcagcctgtggggggactttgtgc
cgggacaggcacggactcaggcagtgcggtggcccaaactgtggtggagctcttccactg
tccactgatgccttcaggaaagctgaggagaccgctttgttgctaaataacttgactact
cagctacgggaacctgagaatcaggtcaaaagcatcaggaaaatggcagaagagagcaag
ttgaaaggctcacaatttaaagggcaactggagagggctaagaatcaaattgaagttgac
caagagatcactaaggagttcatccgaaaagtgaaagacttcttgttagatgagagcgca
cctccagaagacacagagaaggtggcaaactacattctgcaaataaaccttcccctgact
tctcaagagctcacagtcatgcttgacaaaatcaggagcattatgaagccctgtgagaag
tacaaactgaatgcaagtaagagaaacagaaaaagggaagaagctcagacactgctggtg
gaggcacaagaagctgacaaagcagctaaagctcttctgcctgtggatgaaattaataat
aaactaaaaaatgttgtgaagtcccaaggacgctccaaaaacaccttaataaagttaaat
gaagagatacgggccatcagaacacaaatctcacaggctgagaacaaagtgaacaagaca
aatgatgaactaaatgacttgtcagcaaaacagtctgagatggaagatgaaattgccaca
ttgcaggcaaaaatgctgatgaacaagaatcaagctacgaaggcaagagcagaggcagaa
gcagcacacaagcaagcccagaatattgataatgaatttgctgacattaaaagaaagtac
accattcttcaagaaaacctaaaagcccgggtacctccaaaagtaacactagaaaaagtg
aagcagctgaaagaagcagcagaaaaactggctgaggagactgaaagaaaaattaaaagg
ataacagatttggagaagaagcttcgggacctgaatcaaaccaaacaagacaaggcagag
caactgagacaactagaagaacaagtaatagccattaaaaatgaaatcactgagcaggaa
agcaagtatgcaacatgcaaaagttag
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integrated database retrieval system
