Caloenas nicobarica (Nicobar pigeon): 135987504
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Entry
135987504 CDS
T11056
Symbol
SOX11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135987504 (SOX11)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135987504 (SOX11)
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135987504
NCBI-ProteinID:
XP_065488533
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Position
3:complement(18568006..18569318)
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AA seq
404 aa
AA seq
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MVQQAESAEAESNLPREAMDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPNASQSPEKNAPTSSGGSSKSSKSSSKKCSKLKASSASSPPKPGAKAAH
HGDYAGDEYVFGTLKVSSKTVKCVFMDEEEDEEEDEDELQLRIKQEAEEEEEDEEPGPQQ
LRRYNVAKVPASPTLSSSAESTEGTSLYEEVRGGAAAAGGGSRLYYSFKNITKQGPPPPQ
QPPGLSPASSRSISTSSAGSEEADDLLFDLSLNFSQHGHAAAELGAGAAAGNLSLSLVDK
DLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaagcggaaagtgcggaggcggagagcaacctgccccgggaagcgatggac
acagaagagggcgagttcatggcttgcagcccggtggctttggatgagagcgatccggac
tggtgcaaaacggcgtcggggcacataaagagaccgatgaacgcgttcatggtgtggtct
aagatcgagaggagaaaaatcatggagcagtcgccggacatgcacaacgcggagatctcc
aagcgcctgggcaagcggtggaaaatgctgaaggacagcgagaagatccctttcatccgg
gaggcggagaggctgcggctcaagcacatggccgattaccccgactacaaataccggccc
aggaaaaagcccaaaatggacccatcggccaagcccaatgccagccaaagtccggagaaa
aacgcacccaccagcagcggcggcagcagcaaaagctccaagagctccagcaagaagtgt
agcaagctgaaagcctcctccgcctcctcgccccctaagccgggagcaaaagccgcccac
cacggggactacgcgggagacgaatacgtcttcggcaccctgaaagtcagcagcaagacg
gtcaagtgcgtcttcatggacgaggaggaggatgaggaggaggacgaggacgagctgcag
ctgcggatcaagcaggaggcggaggaggaggaggaggacgaggagccggggccgcagcag
ctgcggcggtacaacgtggccaaagtgccggcgagtcccaccttgagctcctcggcggag
tccaccgaggggacgagcctctacgaggaggtgcggggcggtgccgcggcggcgggcggc
ggcagcagactctactacagcttcaagaacatcaccaagcagggcccgccgccgccgcag
cagccgcccggcctctccccggcctcctcccgctccatctccacctcgtcggccggcagc
gaggaggcggacgacctgctcttcgacctcagcctcaacttctcccagcacggccacgcc
gccgccgagctgggggcgggggccgccgccggcaacctctccctctcgctggtggacaag
gacctggactccttcagcgagggcagcctcggctcccacttcgagttccccgactactgc
accccggagctgagcgagatgatcgcgggcgactggctggaggcgaacttctccgacctg
gtgttcacgtactga
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