Caloenas nicobarica (Nicobar pigeon): 135987690
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Entry
135987690 CDS
T11056
Symbol
SIX2
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135987690 (SIX2)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
135987690 (SIX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Phage_mat-A
YdaS_toxin
HTH_TSHZ3
HTH_72
Motif
Other DBs
NCBI-GeneID:
135987690
NCBI-ProteinID:
XP_065488825
LinkDB
All DBs
Position
3:93328462..93333007
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AA seq
287 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLSASMNGNKTVLGSSEDEKTPSGTPDHTSSSPALLLTSNP
GLQPLHGLGHPQGPSAIPVPSADPMHHHSLQDSILNPMSSNLVDLGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctcccgacttttggcttcacccaagagcaagtggcctgcgtctgcgaggtg
ctccagcaaggcggcaacatcgagcggctggggcggttcctctggtccctccctgcctgc
gagcacctccacaagaacgagagcgtcctgaaggccaaggcggtggtggccttccaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcggcgcacaaccac
cccaagctgcagcagctctggctgaaggcgcactacatcgaggcggagaagctgcggggg
cgacccctaggggcggtgggcaagtaccgggtgcgccgcaagttcccgctgccccgctcc
atctgggacggcgaggagaccagctactgcttcaaggagaagagccgcagcgtcctccgc
gagtggtacgcccacaacccctacccgtccccccgcgagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggttcaagaaccgccggcagcgggaccgc
gcggccgaggccaaggaaagggaaaacaacgagaattccaactccaacagccacaacccg
ctctcggcgtcaatgaacgggaataagacagttttggggagctcagaggacgagaagacg
ccgtcagggaccccggatcacacctcctccagccccgcgctgctcctcacttccaacccc
ggcctccagcccctgcacggcctgggccacccccagggccccagcgccatccccgtgccc
agcgccgaccccatgcaccaccacagcttgcaggactccatcctcaaccctatgtcatct
aacctggtcgatctgggctcttaa
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