Caloenas nicobarica (Nicobar pigeon): 135987731
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Entry
135987731 CDS
T11056
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135987731 (PRDM4)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135987731 (PRDM4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_16
C2CH-3rd_BIRD-IDD
zf-met
zf-C2H2_jaz
zf-C2H2_6
Zn_ribbon_Com
PyrI_C
Motif
Other DBs
NCBI-GeneID:
135987731
NCBI-ProteinID:
XP_065488927
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Position
1:60432797..60450809
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AA seq
800 aa
AA seq
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MHPRMNEMNLSPVGMDQLTSSSVSNALPVSGSHLGLTASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNTINVDSNPALSVSSNPSALDPYQPSETVGLEPGIVSMDSRTVNTHGAQNLHP
SDSHEVALDTTITMESVSRVTSPISTDGMTEELTMDDVAGDHSQIPNGSRNHEPLAVDTV
GSNLTSDAVGHGGVIPIHGSTLELPVVMEPDHIAGQVTGISDTTLNDSIHTVAMSTNSVS
VALSTSHNLASLDSVALHEVGLSLEPVTVSSINQEVAMGPSHVDVSADNLAFVPSSLQME
DSNSNKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
MGAEAGVWTRETIPVRTCFGPLVGQQSHSLEVADWTDKAASHVWKIHHNGVLEFCIVTTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSQDYARQLGVPE
HPDMHICHCGKECASYADFKAHVSSHIHSHLPSQGHSSSHGPGHVKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEEDSEEELVDSVRT
EDCRINNGVYSTGDGLSGHK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccagaatgaatgaaatgaacttgagtcctgtagggatggaccagctgacctca
tcctctgtaagcaatgccctgccggtctcggggagccacttgggattgacagcatcgccc
actcacaatgccataccagcaccaggcttgcctgttgcaattccaaacttgggtccctcc
ttgagttccttgccctctgctttgtctctgatgctcccaatgggtattggggatcgagga
gtgatgtgtggtataccagagagaaactacaccctacctccaccaccataccctcacctg
gagagcagctatttcagacacattctacctggtatattatcttacttggctgacagacct
ccacctcagtacatccaccccaacactataaatgttgacagcaatccggctttgtcagtc
tctagcaacccctcagccctagatccctaccagcccagtgagactgtggggctggaacca
gggattgtgtccatggactcccgcacagtgaacacgcacggtgctcaaaacctgcatcct
agtgacagccatgaggtagcgctggatactacaatcactatggagagcgtttcgagggta
accagccccatctctacagatgggatgacagaggagcttacaatggacgatgtagccggg
gatcattcgcagatcccaaacggctcccggaaccatgaacctttagccgtagacacggtg
gggagtaacttgacatcagacgctgtgggacacggcggtgtcattcccattcacggtagc
actttggaactccctgttgtcatggagcccgaccacattgccgggcaggtgacaggaata
tcggacaccacactaaatgactccattcatactgtggccatgagcaccaactctgtgagc
gtggcgctctctacctcacacaacctggcttccctggactcggtagccttgcatgaagtg
ggcctcagcctcgagccggtgacggtgtcttccataaaccaggaagtagccatgggacca
agtcacgtggatgtgtctgcggacaatcttgccttcgtaccatcctctctgcaaatggaa
gactccaattcgaacaaggagaacatggcaaccttgtttacaatatggtgcacactgtgt
gacaaggcatatccatcagactgcccagatcacgggcccgtcacgtttgtccctgacacc
ccgatagagagccgagccaggctctctctccctaaacagcttgtgctccggcagtctatc
atgggagctgaagcaggtgtgtggacacgagaaaccattcctgtaaggacttgttttgga
cctttggtcgggcagcagagccattctctggaggtggccgactggacagacaaagcagcc
agtcacgtctggaagatccatcacaatggtgtcctggagttctgcatcgtgacaactgat
gaaaatgagtgtaactggatgatgtttgtacgcaaagccaggaaccgggaagagcagaac
ctggtagcttatcctcatgatggaaaaatttacttttgcacctctcgggacatcccacct
gaacatgagcttctcttttattacagtcaggactacgcacgacagcttggtgtcccagaa
catccggacatgcacatctgccactgcggaaaagaatgcgcttcctatgcggacttcaag
gcccacgtgagcagccacatccacagccacctccccagccaggggcacagcagcagccac
gggccaggccacgtcaaggagaggaagtggaagtgctccatgtgcccccaggctttcatc
tccccttccaagctccacgtccacttcatggggcacatgggcatgaagccgcacaagtgt
gatttctgtagcaaagctttcagtgatcctagcaacttacggacacacctcaagatacac
acaggtcagaagaattatcgctgtaccctctgtgacaaatcgttcacccagaaggctcac
ctggaatcgcacatggtcatccacaccggggagaagaatctgaagtgcgattactgtgag
aagctgttcatgcggaggcaggacctcaagcagcacgtactcactcacacacaagaacgg
cagatcaagtgccccaagtgtgacaagctgttcctgaggacaaatcacctgaagaagcat
ctcaattcacatgaaggaaagagagactatgtctgtgaaaaatgcaccaaggcttatcta
accaaatatcacctcactcgccacttaaaaatatgtaaaggccccacatccagtctgtca
gccccagaggaagaagaggaggaggattcagaggaggaattagtagactctgtgaggacc
gaagactgtaggattaacaatggagtctattcaacaggtgatggcctctctggacacaaa
tga
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