Caloenas nicobarica (Nicobar pigeon): 135987742
Help
Entry
135987742 CDS
T11056
Symbol
PRDM13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135987742 (PRDM13)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135987742 (PRDM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-BED
zf-C2H2_7th_ZNF462
zf-C2H2_15
Zf-C2H2_ZNF451
GPS2_interact
PyrI_C
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
135987742
NCBI-ProteinID:
XP_065488942
LinkDB
All DBs
Position
3:43682554..43689586
Genome browser
AA seq
618 aa
AA seq
DB search
MQSSRAPAISVSAESCIPAGLRLGPVPGIFKLGKYLSDRREPGPKKKVRMVRGELVDETG
SSALEWIGLIRAARNSQEQTLEAVADLPGGQIFYRALRDVQPGEELTVWYSNPLAQWFDI
PVTATPTHDEKGEERYICWYCWRTFKYPNSLKAHVHFHCALSHGRPFLHHDHGRPAAAAF
GLPPKEPPAAGLRGHPTPGCGPREAVKREAAAASPPLAKPGLPKRAAGKEEQERALDMSV
GAARGLGPLLGPAGGNGLALCPGARSAFRPAGPLREEVRGASALGFSKLLGGLKAGRAAA
EAPPKCGALPGEAAPPAAAGLACGGGLRAFPLLSPLEEASAFRQVERGLPAAALPPARYP
PLPGGALERFALPPFEGLKAYAGECGLPVMPLTVYNGELLYSAAPYYPLKLHLGGLLKYP
ESVSYFAGPAAGLHAAELGSLASIDREIAMHTQQLSELAAEKGRGRLEALPAGATGAAGG
KPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIRLHAEGN
TPYRCEYCGKVLVRRRDLERHVKSRHPGQSLGKAVEDKSDSGYAHPEQEQKTDNESDVDV
CFTDDQSDPESGSRNREQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagcagggctccggccatcagcgtgagcgcagagagctgcatcccggctggg
ctgcgcctgggtcctgtgccgggcatcttcaaactgggcaagtacctgtcagaccgcagg
gagccaggacccaaaaaaaaggtgcggatggtgagaggggaattagtggatgaaaccggg
agctcggctctggagtggatagggttaatccgggctgcccgaaactcccaagagcagaca
ctggaggctgttgcggatctaccaggaggacagattttctaccgggcgctgcgagatgtc
cagccgggcgaggagctcaccgtctggtactccaaccccctggcgcagtggtttgacatc
cccgtcacggccaccccgacgcacgacgagaaaggggaggagcggtacatctgctggtac
tgctggaggaccttcaagtaccccaacagcctcaaggcccacgtccacttccactgcgcg
ctgagccacggccggcccttcctccaccatgaccacggccggcccgccgccgccgccttc
ggcctcccccccaaggagccgccggccgccgggctgcgcggccacccgacacccggctgc
ggcccgcgggaggccgtcaagcgggaggccgccgccgcctccccgccgctcgccaagccg
gggctgcctaagcgggcagcgggcaaggaggagcaggagcgcgccctggacatgagcgtg
ggggccgcccgcgggctggggccgctgctgggaccggcgggcggcaacgggctggcactc
tgccccggggcgcgctcggctttccgccccgccgggccgctgcgggaggaggtgcggggc
gcctccgccctcggcttctccaagctgctgggggggctgaaggcgggacgcgccgctgcc
gaggcgccgcccaagtgcggggcgctgccgggcgaggccgcccccccggcggcggcgggg
ctggcgtgcggcggtgggctgcgcgccttcccgctgctctcgcccctggaggaggcttcg
gctttccggcaggtggagcgggggctgcccgccgctgcgctgccgcccgcccgctacccg
ccgctgcccggcggcgcactggagcgctttgcgctgccgcccttcgaggggctgaaggcg
tacgcgggggagtgcgggctgccggtgatgccgctcaccgtctacaacggggagctgctc
tacagcgccgcgccctactacccgctgaagctgcacctcggcggcctcctcaagtacccc
gaatcggtgtcatacttcgcggggccggcggcagggctgcacgccgccgagctgggctcg
ctggccagcatcgaccgggagatcgccatgcacacgcagcagctctctgagctggcggcc
gagaagggccgcgggcggctggaggcgctgccggcgggggcgaccggggcggccggcggg
aagcccaagacggggcacctgtgcctctactgcgggaagctgtactcccgcaagtacggg
ctgaagatccatatgcggactcacactggctacaagccgctcaaatgcaaggtctgcctg
cggcccttcggggaccccagcaacctcaacaagcacattcgcctgcacgccgagggcaac
acgccctaccgctgcgagtactgcggcaaggtgctggtgcggcgccgcgacctggagcgg
cacgtcaagtcccggcacccggggcagagcctcggcaaggcggtcgaggacaagagtgac
tctggctacgcgcaccccgagcaggagcaaaagactgacaatgaaagcgacgtggacgtc
tgcttcaccgacgaccagagcgacccggagagcggcagcaggaaccgcgaacagtga
DBGET
integrated database retrieval system
