Caloenas nicobarica (Nicobar pigeon): 135987787
Help
Entry
135987787 CDS
T11056
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135987787 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135987787 (NRXN1)
Membrane trafficking [BR:
cnic04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
135987787 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
135987787
NCBI-ProteinID:
XP_065489023
LinkDB
All DBs
Position
3:complement(106569234..107308437)
Genome browser
AA seq
1499 aa
AA seq
DB search
MGAALVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDTAVNDNLWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQASPVESQEVRLDDEQSRLCAREDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTL
QRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRN
LRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGS
PVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPE
SFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDG
HLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILD
LDDDLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGV
KPSCSRETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGKSCEREATILSYDGSMFMK
IQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRIN
CNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLEFHNIE
TGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVT
FKTKASYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDL
GNGANLIKGSSNKPLNDNQWHNVMISRDTHNLHTVKIDTKITTQSTAGARNLDLKSDLYI
GGVAKEMYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQ
EDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDRPSTR
ADRLAIGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDISIEEINAIIN
DGKYHVVRFTRSGGNATLQVDNWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLD
KGRQLTIFNSQATIKIGGKERGHPFQGQLSGLYYNGLKVLNMAAENDANIMIEGNVRLVG
EVPSSMTTESTATAMQSEMSTSVMETTTTLATSTARRGKAPTKEPIGQTTDDILVASAEC
PSDDEDIDPCEPSSGGLANPTRAGGGREYPGSSEVIRESSSTTGMVVGIVAAAALCILIL
LYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSNKNKKNKDKEYYV
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggcgctggtgcggcgcgggggctgcctgctgctctggctggccctgctgctg
ggctgctgggccgagctgggcagcgggctggagttcccgggggcagagggccagtggact
cgcttccccaagtggaatgcctgctgcgagagcgagatgagcttcaacatgaagacacgc
agctccagcgggctggtgctctactttgacgatgagggcttctgcgacttcctggagctc
atcctcacccagggtgggcggctgcagctcagcttctccatcttctgtgctgagcccgcc
accctgctctccgacacggcggtcaacgacaacctctggcatgctgttgtcatccgccgc
cacttcaagaacacgacgctgatcatcgaccgggccgaggccaagtgggtggaggtgaag
tccaagcggcgggacatgactgtcttcagtggcctcttcttaggggggctcccgccagag
ctgcggtcggcgacgctaaagctgacactctcctccgtcaaggaccgggagcctttcaag
ggctggataacggatgtccgggtcaactacacgcaggcgtcaccggtggaaagccaggag
gtgcggctggacgatgagcagagccgcctgtgcgccagggaggacgtctgcctcaacggg
ggtgtctgctcggtgctcaatgaccaggccgtctgcgattgctcccaaacgggctttcgg
gggaaggactgcagcgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggaaaagaagaatatattgcaacattcaagggatcagaatacttctgctatgat
ttatctcagaatcccatacagagtagcagtgacgaaataactctgtcatttaaaacgctt
cagaggaacggactgatgcttcacacaggaaaatcagctgattatgtcaatcttgcactg
aaaaatggagctgtctccttggtcattaatttgggctcaggggcctttgaagcgctggtg
gaacccgtgaatgggaaatttaatgacaatgcctggcatgatgtgaaagtaaccaggaat
ctgcgtcagcactcaggcattggacacgctatggtaaacaaactacattgttcggtaaca
atatcagtggatggaattctgaccacaacgggctacacgcaagaagactacaccatgctg
ggctccgatgactttttctatgttggaggcagtcctagcacagcagacctcccagggtcg
ccagtcagtaacaactttatgggctgtctcaaagaggttgtatataaaaacaacgatgtc
agattggagctatctcgacttgccaagcaaggagatcctaaaatgaagattcatggggtt
gtagcatttaaatgtgagaatgtcgcaaccttagatccaatcacatttgaaacaccagag
tctttcatctctttgccaaagtggaatgccaagaaaacaggctcaatatcgtttgacttt
cgtaccactgagccaaatggcctgattcttttcagtcatggaaaaccaaggcaccaaaag
gatgccaaacacccacagatggtgaaggttgacttttttgcaattgagatgcttgatggc
cacctctacctgctgttagacatgggatcaggtactataaaaataaaagccttgcaaaag
aaggtgaatgatggcgaatggtaccatgtggattttcaacgggatggacggtcagggacc
atatctgtgaacacattacgtacaccatatactgcaccaggggaaagtgaaatccttgac
ttggatgatgacttgtatcttggaggcttaccagaaaataaagcaggcctcgtcttccca
acagaggtgtggacagcacttctcaattacggatacgtcggctgcattagagatttattt
attgatggtcaaagcaaagatattcgacagatggctgaaattcaaagtacagctggagta
aaaccctcatgctcaagagaaactgcaaaaccttgccttagcaacccctgtaaaaacaat
ggtgtatgcagggatgggtggaacagatatgtttgtgattgctctggcacagggtacctt
ggcaaatcatgcgaaagagaggcaacaattttaagttatgatggaagtatgtttatgaaa
atacaactccctgttgtgatgcatacagaggccgaagatgtttctttacggttcaggtcc
cagcgagcttatggcattttaatggcaaccacttctagggaatctgcagatacccttcgt
ttagagttggatgcaggacgagttaaactgacggtcaacctagactgtatcaggattaac
tgtaattccagcaaaggtccagaaaccctttttgctggctataacctcaatgataatgag
tggcacacagtgcgtgtggttcggcgaggaaaaagtttaaagttaatggtggatgaccag
caggccatgacaggtcaaatggctggtgatcacacgcgactggaattccacaacatagaa
acaggaataataacagaacggcgctacctgtcttctgtgccttctaatttcattgggcat
ctgcagagtcttacatttaatggcatggcatacattgacttatgtaaaaatggagacatc
gattattgtgagcttaatgcaagatttggattcaggaacatcatagcagaccctgtaacc
tttaaaacaaaagcaagttacgttgcattggccacactacaagcatatacatctatgcac
ctttttttccagttcaaaacaacctctctggatggattgatactttataacagtggcgat
ggaaatgatttcattgtggttgaattagtaaaagggtatttacactatgtgtttgacttg
ggaaacggtgcaaatctcatcaaaggaagttctaataaacctctgaatgacaaccagtgg
cataatgtgatgatatcaagggatactcacaatctccacactgtaaagattgacactaaa
atcacaacacagagcacagcaggagccagaaatttagatctcaaaagtgatttgtatatt
ggaggagtggccaaagaaatgtataagtccttgccaaaactggtgcacgcaaaagaggga
ttccaaggctgtcttgcatcagttgacttgaatggacggctccctgatctaatctcagat
gctctcttctgcaatgggcaaatagaaagaggatgtgaaggccccagcacaacatgccaa
gaggattcgtgcgcaaaccagggcgtgtgcttacagcagtgggatggattcagttgtgac
tgcagtatgacctccttcagtggaccactatgcaatgacccgggaacaacatatatcttt
agcaaaggtggtggacaaatcacttacacgtggcctcctaatgatcggccaagcactcgt
gcggacagactggcaatagggtttagtactgttcaaaaagaagctgtattggtacgagtg
gacagttctactgggctcggagattatttagagctgcatattcaccagggaaaaattgga
gttaaatttaatgttggaaccgatgacatctctatcgaagagatcaacgcaatcattaat
gatggaaaataccacgtagtacggttcacaagaagtggtggcaatgccacattacaggtg
gacaactggccagttatcgagcgttacccagcaggaaacaatgataacgagcgcctggcg
attgctagacagcgaattccatatcgacttggtcgagtagttgatgaatggctactcgac
aaagggcgtcagctcacaatcttcaatagccaagcaaccataaaaattggaggcaaggaa
cgtggccatcctttccaaggccagctctctggtctttactacaatggcttgaaagttctg
aatatggcagcagaaaatgatgccaacatcatgatagaaggaaatgtgagacttgttggt
gaagtgccttcctctatgacaaccgagtccacagccacagcgatgcagtctgagatgtcc
acttcagtcatggaaacaaccaccactttggccacaagcaccgctagaagaggaaaggcc
ccgacaaaagaacctattggtcagaccacggatgacatcctggtggcctcagctgaatgt
cctagcgatgacgaggacattgatccctgtgagccgagctcaggtgggttagcaaatcct
accagggcaggaggaggaagggagtaccctggctcgtccgaggtgattcgtgaatccagc
agcacgacagggatggtagttgggatcgtggcggcagcggcgctgtgtatcctcattctc
ctctatgctatgtacaagtacaggaatcgagacgaaggatcttatcacgtagatgagagt
cgaaactacatcagtaactcagcacaatccaatggggctgtgatcaaggaaaagcagccc
aacagcgctaaaagttccaacaaaaacaagaaaaataaggataaggagtactatgtctga
DBGET
integrated database retrieval system
