Caloenas nicobarica (Nicobar pigeon): 135987811
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Entry
135987811 CDS
T11056
Symbol
XPO5
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135987811 (XPO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnic03016
]
135987811 (XPO5)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135987811 (XPO5)
Transfer RNA biogenesis [BR:
cnic03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
135987811 (XPO5)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
135987811 (XPO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
135987811
NCBI-ProteinID:
XP_065489106
LinkDB
All DBs
Position
3:complement(87712317..87742097)
Genome browser
AA seq
1219 aa
AA seq
DB search
MSAEQVSSLCEQLVKAVTVIMDPASTQRYRLEALKFCEEFKEKCPICVPCGLKLAEKTQT
AIVRHFGLQILEHVVKFRWNNMPRLEKVYLKNNVMGLISSGTQSILEEESHIKGVLSRIV
VEMIKREWPQHWPDMLKELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPTQRRRDIQQ
TLTQNMEKIFSFLLTTLQQNVNKYRRMVGAPQEQEALTTPQKTDLAQETKAQANCRVGIA
ALNTLAGYIDWVALSHITADNCKLLEMLCLLLNEPELQIGAAECLLIAVSRKGKLEDRKP
LMVLFGDVAMHYILSAAQTADGEGLVEKHYVFLKRLCQVLCALGSQLCALLGSECDVETP
ANFGKYLDAFLAFTTHPSQFLRSSTQITWGALFRHEVLSHDPLLLAMIPKYLRASMTNLV
KVGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSFRAQQGEVMRMACRLDPRTGFQMAGEWL
KYQLTTPVDTGPMNSRTGEGLCSIFSPSFAQWDAMTFFSESVISQMFRTLDKDDIPVNDG
IDLLQLVLNFETKDPLILSCVLTNVSALFPFVTYRPEYLPQVLSKLFASVTFEVIEESKF
VMSVQAPRTRAVKNVRRHACSSIIKMCRDYPQLVLPNFDMLYNHVKQLLSNELLLTQMEK
CALMEALVLISNQFKDYERQKAFLEELMAPVAGLWLSPEMQRVLSDAEAFISYVGADNKI
ADPVLEDPSGLNRSRISFCVYTILGVVKRARWPADTEEAKAGGFLVGYTPSGNPIYRNPC
TEQVLKLFDNLLALIRTHNNLYMPEMVARLGETFAKALDMLEVEKNAILGLPQPLLELYD
SPVYKTVLERMQGFFCTLYDNCFHILGNAGPSMQQDFYTVDCLATQLLSSAFTNLNNIPD
YRLRPMLRVFVKPLVLSCPPEYYETFVCPMLGPLFTYLHMRLSQKWQVINQRSMLCEDDA
ADDNPESQEMLEEQLVRLLTREVMDLITVCCVSKKGVDHNTTAAVDGDDDEAMVTEVTPP
ASAELTELGKCLTKQEDVCTAVLITAFTSLSWKDTLSCQRTTTQLCWPLLKQVLSGNLLP
DAVSWFFISVLKGLQIHGQHDGCMAALVHLAFQIYEALRPRYTELKAVMEQIPDIHRDSL
EQFDSKLLNPTPQKVADKRRKDHFKRLIAGCIEKPLGEQFRKEVHIRNLPSLFKKVKPLL
GTDMLENEDGEGLTALFEP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgagcaggtgagcagcctctgcgagcagctggtgaaggcggtgacggtgatc
atggacccggcctccacgcagcgataccgcctggaggcgctaaagttctgcgaggagttc
aaggagaagtgtcccatctgcgtgccctgcgggctgaagctcgcggagaagacgcagacg
gccatcgtccggcacttcggcctgcagatcctggagcatgtggtcaagttccgctggaac
aatatgcctcgcctagaaaaagtttatctaaagaacaatgtcatgggcctcatatccagt
ggaactcaaagcattctagaggaagaaagtcacattaagggtgttctgtctcgcattgtg
gtggagatgatcaagcgtgaatggcctcagcactggcctgacatgctaaaggagctggat
accctctccaagcaaggggaaactcagacagaactggtgatgttcatcctcctacgtttg
gcggaggatgtggtgacttttcaaactctgcctacccagcggcgacgagatatccagcaa
acgctcacccagaacatggagaagatcttcagcttcctactaactactctgcagcagaac
gtcaataagtacagacggatggttggagcaccccaggaacaagaagccctcaccactcca
cagaagactgatctggctcaggagacaaaggcccaggcaaactgccgtgtgggaatagca
gcactcaacaccttggctggctacattgactgggtggccctgagccacatcacagcagac
aactgcaagctcttggagatgttgtgtctgctcctaaacgagcctgagctccaaatagga
gcagcagagtgtctcctgattgctgtcagcaggaaaggtaagctggaggatcgaaagcct
ttgatggtcttgtttggagacgttgccatgcactacattctctctgctgcccagacagca
gatggagaaggcctggtggagaagcactatgttttcttgaagagactttgccaagttttg
tgcgcgttgggcagccagctatgtgcgttgctaggctcagagtgtgatgtggaaacacca
gccaactttggaaaatacctcgatgcatttttagccttcacaacccatcccagccagttt
ctgcgctcttccacccagatcacatggggagccctctttcggcatgaagttctgtctcac
gaccccttgttgctggccatgatccccaagtacctccgtgcatctatgaccaacctagtg
aaggtgggctttccctctaaaacagacagccccagttgtgaatactcccgctttgatttt
gacagtgatgaggacttcaatgccttcttcaactctttccgagcccagcaaggagaggtg
atgaggatggcttgtcgtctggaccctcgaacgggcttccaaatggctggtgaatggctg
aagtaccagctgacaactcctgttgatactggacctatgaactctaggacaggcgaaggt
ctctgctccatcttctctccatcctttgcacagtgggatgccatgaccttcttctcagag
agcgtcatcagccagatgtttcgaaccctggacaaagacgacatcccagtgaatgatggc
atagatctgctgcagcttgtccttaattttgaaacaaaggatcctctcatcctgtcctgt
gtgctcaccaatgtctctgctctcttcccatttgtcacttaccgaccagaatacctacca
caagtgctttccaagctgtttgcttcagttacctttgaagttatagaagaaagtaagttt
gttatgtctgtccaggctcctagaactcgggcagtgaagaatgtaagaaggcatgcatgc
tcctcaatcataaagatgtgtcgggattaccctcagcttgtcctgccaaactttgacatg
ttgtacaaccacgtgaagcagctgctctccaacgagctacttctgacgcagatggagaag
tgtgctcttatggaggccctcgtcctcatcagcaaccagttcaaggactatgagcggcag
aaagctttcctggaggagctcatggctcctgttgctgggttgtggctctccccagagatg
cagagagtcctctcggatgctgaagcctttatctcctatgtgggtgcagacaacaaaatt
gctgatccagtcttggaagatcctagtggcctgaaccgctctagaataagcttttgtgtg
tacaccattctgggagttgtgaaacgagctcgttggcctgctgatactgaagaggcaaaa
gctggaggattcctggtgggatacacacccagtggaaatccaatctaccgtaatccctgc
actgagcaggtcctgaagctttttgacaatttacttgcacttataaggactcacaacaat
ctctacatgccagagatggtggctaggctgggggaaacatttgcaaaagccttagacatg
ctggaggtggagaagaatgccattctaggtctccctcagcctctgctggagctttatgac
tctcctgtttacaaaacagtcttagaaaggatgcagggcttcttttgtaccctctacgac
aactgtttccacatcctgggaaatgcaggcccctccatgcaacaggatttctacaccgtt
gattgtctcgccacccagctcctcagctcagctttcaccaacctcaacaacattcctgat
tacagactgcgtcccatgctccgtgtgtttgtgaagcccttggtactctcctgccctcca
gaatactatgaaacctttgtctgccccatgctgggaccactctttacctatctgcacatg
aggttgtctcagaaatggcaggtgatcaaccagcgaagcatgctctgtgaggatgatgct
gcagatgacaaccccgagtctcaggagatgcttgaggaacagctggtcaggctgctgacc
cgagaagtcatggatctcatcactgtttgctgtgtttccaagaaaggtgttgaccataac
actactgctgctgtagacggagacgatgatgaggcgatggtcacagaggtgactccccct
gccagcgcagagctcactgagcttggcaagtgtctgacgaagcaggaggatgtttgcact
gcagtgctgatcactgccttcacatccctctcctggaaggacaccttgtcctgccaaaga
accacaacacagctttgctggcctctgctcaaacaggtgctttcaggaaacctcctgcct
gatgctgtgtcctggtttttcataagcgtgctgaagggcttacagatacacgggcagcac
gatggctgcatggcagctcttgtccacctggctttccagatctacgaggccttgcgccct
cgctacactgagctgaaggcagtgatggagcagataccagacatccacagggactctttg
gagcagtttgattcaaagcttctcaacccaacaccacaaaaggtggccgacaagcgccgg
aaggatcatttcaagcgcctcatcgcaggttgcattgagaagccccttggggagcagttc
cgcaaggaggttcatatccggaacctcccgtctctcttcaaaaaggtgaagccattattg
gggacggatatgctagaaaatgaggatggagagggcctcactgcactctttgagccctga
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