Caloenas nicobarica (Nicobar pigeon): 135987918
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Entry
135987918 CDS
T11056
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135987918 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135987918 (DHX15)
03009 Ribosome biogenesis [BR:
cnic03009
]
135987918 (DHX15)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135987918 (DHX15)
Spliceosome [BR:
cnic03041
]
Complex A
U2 snRNP components
U2 related factors
135987918 (DHX15)
Complex B
135987918 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
135987918 (DHX15)
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
90S particles
Helicases
135987918 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
AAA_29
Flavi_DEAD
AAA_25
Atrophin-1
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
135987918
NCBI-ProteinID:
XP_065489332
LinkDB
All DBs
Position
4:60103207..60150292
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AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
STSNSTYYAAAGLPTIKQAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgtctagacctgggggacgattacagctccagcaagaaacgcagc
accgacgggaaagatcgcgaccgggacagggaccgtgatgaccgttctaaagatcgcgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcga
tctacatctaattctacgtattatgcagctgctgggttaccaactataaaacaagcaatg
attccacacagtattaaccctttcacaaatctaccacatacaccacgatattatgacatc
ctgaaaaaaaggctacagcttcctgtctgggaatataaagaaagatttacagatattttg
atcaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcaatggtgtgttgattacatgcgctcgttacctggaccaaagaggggagtagcctgt
acccagcctaggagagtagctgcaatgagtgtggcacagcgggttgctgatgagatggat
gtcatgctgggccaagaggttggttactctattcgatttgaagactgcagtagcgcaaaa
accattttgaagtacatgactgatggtatgttacttcgtgaagcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggcccatgagagaacactggctactgat
attttgatgggagttttgaaggaggttgtaagacaaagatctgatttgaaggttatagta
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttcta
actatcccgggtcgcacccatcctgtggagatattctatacaccagaaccagaaagggac
taccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaggaggaagga
gatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgatttaggccctgaagttggtgacatcaaaatcattccattgtattcc
acccttcctccacagcaacagcaaaggatttttgaacctcccccaccaaaaaagcaaaat
ggagcaataggaagaaaggttgttgtgtccactaatattgccgaaacatctttaacaata
gatggtgttgtgtttgtgattgatcctggctttgcaaagcagaaggtgtacaatcctcgt
atcagagtggagtctctcttggtgactgcgattagtaaagcttctgctcagcagcgagct
ggccgtgctggtcgtactagaccaggcaagtgcttcaggctttacacagagaaggcttac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattgcagctcaagaagcttggtatagatgatttggtacactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccattggacccacaa
ctggccaaaatggttattgcaagttgtgactacaactgttctaacgaggtcctatctatc
actgccatgttgtcagtcccacagtgtttcgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcactgactttaccagccgagactattacataaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggaacgaacagggcattac
ttaacagtaaaagataaccaggtggtgcagttgcatccctccaccgttcttgatcataag
ccagagtgggtgctctacaatgagtttgtccttacaacaaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgtgaagcaaagaggcagttggatcgcatcattgccaaacttcagtccaag
gaatactcgcagtactga
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