Caloenas nicobarica (Nicobar pigeon): 135988006
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Entry
135988006 CDS
T11056
Symbol
THAP9
Name
(RefSeq) DNA transposase THAP9 isoform X1
KO
K23209
DNA transposase THAP9 [EC:2.7.7.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135988006 (THAP9)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Gene silencing
Transposable elements
135988006 (THAP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNP-like_RNaseH_N
THAP9_C
TNP-like_GBD
Tnp_P_element
THAP
TNP-like_RNaseH_C
GPHR_N
Motif
Other DBs
NCBI-GeneID:
135988006
NCBI-ProteinID:
XP_065489577
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Position
4:complement(25632437..25639070)
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AA seq
886 aa
AA seq
DB search
MTRSCSALGCTARDTGRSRERGISFHQFPVDAAQRREWIRAVNRVDPRSRQAWRPGPGAI
LCSRHFAETDFERYGLRRKLRRGAVPSRFPRPEPPGAGRRSGLAARAPKQPLPGGDHTYS
LKGQPAAGGEARPPRGALQQLPAGGRCGPAHRRSAVLSVLRELAEKRQLSQETVSLLQAQ
FPDLPCESNSWRQMAEYSPEMRQFACVLHLYHNKAYDYLRKILPLPHPSSLTNWLSNNEA
AAGFSNDVFLCLQEKVERGEHAYCYCALMVQDVSLQKQQEWDPQTQCLTGFVDLGAGVLD
ADEAPLASDAIILMAVGLSSPWRAPLGYFFVNSTTGHLLAQLLRQTINKLNNIGITVLAV
TSGATAHGAEAARALGIRMDPERIYCTFHHPPGSAHSITYFFDIWHTLQLIRNALQCFQK
IEWLGDTVQWQHVVELAALQEERVLEPCTRRSGRPGIEESYYLKVNLATPLFSEGVADAL
EHLQKLGLASFRNCSGTVKFLRLMSRLCEVFYGRHPYGRELKGPLLAGNYAKINHLFNDA
KSCFVTLMDSMGRYIIKSKRKLGFLSFLLNAESFKWLYTNYACPEGTSSHHLLTYIFSLD
PLQLFLRALRQACGSSGNPSCAAFQAAYHKLLASSSLAPGSPQSSGSGNTSSLDISPFHR
RDLTLGSIRAQYNPACGRTLAGEYPCCAGFLLHGSALSNALTDLSLHAQSIACTAGFVAE
QLASDLHCEACLAALFESDESRPRCGSVLYIKKLGGVSLPSASVHHITSISEQVLNQYGK
LGDGDKNSKVWQLSLEQKIFQEFLGQSHLFPTLTKHLLDGELCINNHYTILVKEIMRCYL
NIRINHAKHLNLKDHCGRHRWKRLKGKHLFPSPLDSCQSSQIHTGL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacacggagctgctcggcgctgggctgcaccgcccgcgacaccgggcggagccgggag
cgcggcatctccttccaccagttcccggtggacgccgcgcagcgccgcgagtggatccgc
gccgtgaaccgggtggacccgcggagccgccaggcctggcggcccgggcccggggccatc
ctctgctcccggcatttcgccgagaccgacttcgagcgctacgggctgcggcggaagctg
cggcggggggccgtgccctcccgcttcccccgcccggagccgccgggcgcgggccggagg
agcgggctcgctgcccgggccccgaagcagcctctccccggcggggaccacacctacagc
ctgaaggggcagccggcggcgggcggggaggcgcggccgccacgcggggccctgcagcag
ctcccggcgggcgggagatgcggccccgcgcaccggcgcagcgcggtgctgagcgtcctc
cgggagctggcggagaagcggcagctttcccaggaaaccgtgagtttgctgcaggcccag
tttccagatttgccttgtgagtcaaacagctggaggcagatggcagaatactcaccagaa
atgaggcagtttgcttgtgttctccacctctaccataataaggcctatgattatctaagg
aagattcttcccctgcctcatccttcaagcctgacaaattggctgtctaataacgaggct
gctgcaggcttcagcaatgacgttttcctctgccttcaggaaaaagtggagagaggggaa
catgcttactgctactgtgccctgatggtacaggacgtgtccctgcagaagcagcaggag
tgggacccgcagacccagtgcctgacaggctttgttgacttgggagcaggcgtccttgat
gctgatgaagctccactggcctcggatgcgataatcctcatggcagttggcctctcaagt
ccctggagggctcccctcggttacttctttgtgaacagcacaaccggtcacctacttgct
cagctgcttcgtcagaccatcaataagctgaacaacatcggcatcacagtgctagcagtg
acatcgggcgccaccgctcacggtgctgaggctgccagagctctggggatcaggatggat
cctgaaaggatctactgcacttttcaccacccgcccggctctgctcacagcatcacgtac
ttctttgacatttggcacacgctccagctgataaggaatgcactgcagtgcttccaaaag
atagagtggctcggtgacactgtgcagtggcagcacgtggtggagctggcggctttgcag
gaggagagggtgttagagccatgcacacgcaggtcaggcagacctgggattgaggagagt
tactacctaaaggtcaacctcgctaccccgttattcagtgagggtgttgctgacgcactg
gaacacctccagaagctgggtctggcctcattccgcaactgcagcggtactgtcaagttt
ctgcgattgatgagccgtctctgtgaggtattttatggcagacatccctatggaagggaa
ctaaaggggcctttgctagctggaaattatgccaaaataaaccacctctttaacgatgcc
aagagctgctttgtcaccttaatggactctatgggaagatacattattaagagcaaacgc
aaactaggatttctgagtttcctcctcaatgccgaaagcttcaagtggctttacaccaac
tatgcatgtccagaaggcacttcttcccaccacctcctgacctacatcttcagccttgac
ccgctgcagctgtttctcagggccctcaggcaagcctgtggcagcagcgggaacccctcc
tgtgctgctttccaggccgcttatcacaaactgctggccagctccagcctggcaccgggc
tccccacaaagcagtggctcaggcaatacgagctccttggatatttccccatttcataga
agagatctgacccttggcagcattcgtgctcagtataacccagcttgtgggcggacactg
gcaggagagtacccctgttgtgcagggtttcttttgcatggctctgcactgagcaatgca
ctgacagacctatcgctgcatgcacagagcattgcctgcaccgcgggctttgttgctgag
caattagcctctgacttgcactgcgaggcttgtcttgctgccctctttgagtcagatgag
agcaggccaagatgcgggtcagtgctctacataaaaaagttaggtggagtgagtctgccc
tcagcaagtgtgcaccacataacaagcatttcggaacaagtcctaaaccagtatggcaaa
ttaggagatggtgacaaaaactccaaggtgtggcagttgtctctagaacagaaaatcttc
caggaatttctgggacaaagtcacctctttcccaccctcacaaaacacttacttgatggg
gagttatgcatcaacaatcactacacaatcttagtgaaggaaataatgcggtgttactta
aacatcagaataaaccatgccaaacacttgaacttgaaagaccattgtggaaggcacaga
tggaagagactgaagggaaagcatttgtttccatcaccactggatagctgtcagtcaagc
caaatccacacagggctctga
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