Caloenas nicobarica (Nicobar pigeon): 135988063
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Entry
135988063 CDS
T11056
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135988063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135988063
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
135988063
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
HECT type E3
135988063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
135988063
NCBI-ProteinID:
XP_065489689
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All DBs
Position
4:complement(31603363..31654227)
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AA seq
1050 aa
AA seq
DB search
MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTSLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSVLLD
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYITLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALKLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEDGDKILVHKDNRKEFVEAYVNYIFNL
SIHEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHAFPLEKKKKFLLFLTGSDRIPIYGMSSLRIVIQSTTSGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggttactcgtcttttggacagcctgggataggtagcaacctccaggtc
atcattcctgagccacaggtgtatggattcattcatgacagaaatgtcaaggaggtggca
tgtggaggaaatcactctgtgtttctgttagaagatggggaagtgtatacatgtggcttg
aacaccaaaggccaactggggcatgactgtgaaggaagcaagccagagcaaatcggagcc
ctggccgggcagcacatcgtgcacgtggcctgcggagagtctcacagcttggcgctcagc
gaccagggacagctcttctcctggggtgctggcagtgacgggcagttgggcctcaccact
atagaagacgcagtgacagtgccaaggttgataaagaaattgaaccaacagacaatactg
caagtttcttgtggaaattggcattgcctggctttggcagcagatggccagttcttcaca
tgggggcagaacagctatggtcagctgggcttgggtaaagaatgtccctcccaagccagt
ccacaacgtgtcaagtctcttgatgggatccctttggctcaggttgctgcaggcggagcc
cacagttttgccctctctctctcaggagctgtgtttggctgggggaagaacagctcagga
cagctgggactaagtgatgaacgagaccgagaatccccttgtcatgtgaagctgttgcgg
tctcagaaggttgtttatatcagctgtggagaggaacacacagctgttctgacaaagagt
ggaggggtgttcacgttcggtgcaggttcctgtgggcaactgggacatgactccatgaat
gatgaagtgaacccccgaagagttcttgagctgatgggcagcgaagtatcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacggggcacacatgcaatgttaagtgtccctctcct
gtcaagggtcactgggcagctcacaatgggcaactctcagggaaacctgatgcctgtaaa
tatcacattgttaaacatatcttctctggaggagaccaaacatttgtgctttgctccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacttct
ttaataaatgatgaaactatagatgtctggagacaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatcctgtcctcagctgcttgctggaatgggagcttc
ttggagaagaaaatcgatgaacattttaaaacgagtccgaagatcccagggattgatctg
aactccaccagagtgctgttcgagaagctgatgaactctcagcactccgttctcctagac
cagatactgaagagctttgaaagttttttgattcctcagctgtccagctcaccaccagat
gtcgaggcgatgaggatctacctgattctccctgaattcccacccttccaagactccaag
tattatatcacattaacgctccctctagcaatggctattcttcgcctagataccaacccc
agcaaagttcttgataactggtggtctcaagtgtgcccaagatatttcctcaggctagtg
gacctctacaaaggcgcagtggtttacctccttagtggaagaaagacactgttgatccca
gtcctgttcagtagctacattacagctgctctcaaacttctggagaagctccacaaggta
aatcagaaggttaaacatgtagaatatgataagttttatatccctgagatttccagcttg
gtggacattcaggaagattatctcatgtggttcttacatcaggctggaatgaaagtaaga
ccatctatcatgcaggatgctgtgacactctgttcttatcctttcatctttgatgctcag
gctaagaccaagatgttgcagacagatgcagaactacagatgcaggttgcaataaatggt
gcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagcaacttagttggtgatgctttaagggagctgagc
atccattcagacattgatttgaaaaagcctcttaaagtcatctttgatggtgaagaagct
gttgatgctggaggagtgacgaaggagtttttcctcctgttgctaaaagaactcctcaac
cccatctatggcatgttcacttactacccagagtcaaacctcctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgcaatatac
aacttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaatgtg
aagccctgcctagaggatttgaaggagctatcacctacggaaggaaggagtctgcagcaa
cttttggattaccctggggaagatgtagaagagacgttctgcttgaattttacaatctgc
agggaaagctatggtgtgacagagcagaagaacctgattgaagatggagataaaattctg
gtgcataaggacaataggaaagaatttgttgaagcctacgtaaattacatcttcaacctc
tccatccatgagtggtacacagccttttccactggtttcctgaaagtgtgtggtgggaaa
gtcctggaactcttccagcccacagagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagtgctgtgtataagggagactacactgcaacacaccca
actgtgagaatgttttgggaaacgtttcatgcatttcccttggaaaaaaagaagaaattt
ctcttgtttctgacgggcagtgaccgcatccccatctacggcatgtccagcctgcgtatt
gtcatccagtccaccaccagcggggagcagtacctgcccgtggcacacacctgctacaac
ctgctggacctgcccaagtacagcagcaaggagatcctcagcgccaggctggtgcaggcc
atcgatcactacgagggcttcagcttagcttga
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