Caloenas nicobarica (Nicobar pigeon): 135988112
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Entry
135988112 CDS
T11056
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04010
MAPK signaling pathway
cnic04020
Calcium signaling pathway
cnic04144
Endocytosis
cnic04510
Focal adhesion
cnic04540
Gap junction
cnic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135988112 (PDGFRA)
04020 Calcium signaling pathway
135988112 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135988112 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
135988112 (PDGFRA)
04540 Gap junction
135988112 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135988112 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cnic01001
]
135988112 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cnic04090
]
135988112 (PDGFRA)
Enzymes [BR:
cnic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
135988112 (PDGFRA)
Protein kinases [BR:
cnic01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
135988112 (PDGFRA)
CD molecules [BR:
cnic04090
]
Proteins
135988112 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Kinase-like
Motif
Other DBs
NCBI-GeneID:
135988112
NCBI-ProteinID:
XP_065489848
LinkDB
All DBs
Position
4:complement(50546834..50581532)
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPRTFLILGCFLTGPFLTLCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGSHRIDIRHEENNSGLFVTVLQVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPTVIPCRTSDPSAQVTLTNSLDKAVYAFYDSKQGFVG
NFPAGSYTCKTMVNGVEFKSDEFLIYILRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFIHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKSYTFSLLIQVPALILDL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDIHMEAHLDE
KNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPTDENTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSVSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDANYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttccccacggacgttcctgatcctgggatgttttctcacaggaccgttccta
acactttgccagcttcctctgccgactattgttcccaataggaatgaaatggtggtacag
ctgaattccaatttcacactcaaatgctctggagacagtgaagtgagctggcagtaccca
gtgactgagggaagccacaggatagacattagacatgaggaaaacaacagtggcctcttc
gtgacagtgctccaagtaggaaatgcctcagccgctcatacgggcttatatgtttgctat
tataaccacactcaagtggaggatggggaagtggaagggaaggacatctacatctatgtg
cctgacccagatatgccttttgttccttctataccagaagaccaattcatcctagtagaa
gaaggtgatcccactgttatcccttgtcggacgagtgacccaagtgctcaagtgacttta
acgaacagtttggacaaggctgtctatgctttctatgacagcaaacaaggcttcgtaggg
aatttccctgcagggtcatatacatgcaaaacaatggttaatggtgtggagttcaagtct
gatgagttcctcatctatattttaagagctacttcacagctgccagttgaaattgaagct
cttaaaactgtctacaaaacaggcgagaccatcgtagtaacttgtgtggtctttgacaat
gaggtggttaatttacagtggaattaccctgggaaagtgaaagaaaaaggtttgataaaa
cttgatgatatcaaagtcccatcacagaaactggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgctcggcatgcgaccaaggaggttaag
gagaataagaaagtagtcattacagttcatgacaaagggttcattcacctggagcctcag
tttagccctctggaagctgtcaatctacatgaagtcaaaaattttgtcgttgatgtgcag
gcatacccagctccaaaaatgtactggttgaaggataacgtgactctgattgaaaatctt
actgagattgttactagttcaaatagagtccaagaaacaaggtttcagagtatattaaaa
ttgatccgggccaaggaagaagacagtggatactatactttggttgctgaaaatgaagat
gagattaaaagctacaccttctccttgctaatacaagttccagccctgatcttagatctc
gtggatgatcaccatggctctgcgggggggcagacggtgaggtgtttggcagaggggacc
ccacttcctgacgtggaatggctggtttgcaaagacattaaaaagtgcagcaatgacacc
tcatggactcttttgactaacaatatctctgatatacacatggaagcccacctggatgag
aaaaacatggtggaaagccaggtgaccttccagaaggtagaggaaaccctggctgtgcga
tgtgtggcaaggaatgaccttggtgctgttactcgggaactgaagcttgtggctcccacc
ttgcgatcagaattaacggtggctgctgcagtcttagtgctgttagtgattgtgataatt
tcactgattgtcctggtcatcatatggaaacagaagccaaggtatgagataagatggaga
gtcattgagtctatcagccctgacggccatgaatacatttatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagacgggttagtgcttggtcgaattcttggt
tctggagcattcggaaaagtagttgaaggaactgcttatggattgagtcgctctcagccg
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagtgaaaaacaggcg
ctcatgtctgaactgaagataatgacacatcttggcccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcatcactgaatactgcttttatggt
gatttggtgaactatctgcataagaacagggacaatttcctgagccgacacccagagaag
ccaaagaaagatttggatatctttgggatgaacccaactgatgaaaacacaagaagttat
gtgatattatcatttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgccaatgctagaaaggaaggagggatctaaatactctgatattcagagatct
gtgtatgatcggcctgcttcatataagaagaaatctgtgtcagaatcggaagtcaaaaat
cttctttcagatgacagctcagagggcctcagcctactggatttgctgagcttcacctac
caggttgcacggggaatggaattcctggcttctaaaaattgtgtgcaccgtgacttggca
gctcgtaatgtcctcctggctcaaggaaaaattgtgaagatctgtgacttcgggctggct
agagacatcatgcatgatgccaactatgtctccaagggcagtactttcctcccagtaaaa
tggatggcacctgaaagcatttttgacaatctgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccatatcctggcatgatg
gtcgactctactttctacaataagatcaagagtggataccgaatggccaaacccgatcac
gctaccaatgaagtgtacgagatcatggtgaagtgctggaacagtgaaccagagaaaagg
ccttctttttaccatctgagtgaaattgtggagagcttgttgcctggagagtacaaaaag
agctatgagaagattcacctggacttcctgaaaagtgatcacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtcacctacaagaatgaggacaagttaaag
gacagggagagtggatttgacgagcagaggctgagtgctgacagcgggtacatcatcccc
ctgcctgacattgaccctgtttctgaggatgagcttggcaaaaggaacaggcacagttcc
cagacatctgaagaaagtgccattgaaactggttccagtagctctactttcatcaagaga
gaggacgagaccattgaggacattgacatgatggacgacattgggatcgactcctcagac
ctggtggaggacagcttcctgtaa
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