Caloenas nicobarica (Nicobar pigeon): 135988115
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Entry
135988115 CDS
T11056
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135988115 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135988115 (FIP1L1)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135988115 (FIP1L1)
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Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
135988115
NCBI-ProteinID:
XP_065489854
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Position
4:complement(50904442..50948850)
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AA seq
585 aa
AA seq
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MSTGEVERLAADLGGAAGDEEEEWLYGDENETERPEEEKASAPPPPGSEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYGYGAAPVNLNIKTGGRAYGSSGAKVK
GVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEVLPVTSTTNKITAEDNAMEVRPSAEILDGRYHLLKVQQGRTGNLEKELAVQSTKADF
TSPPALLKSGIPTNRRLAGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIESGHSSGYDGRSVRAFSYGSDNEVELKTNHLLKALLSMASKADKQRVGSPLYFTFPH
LAGSAPSWSSLMDTSKQWDYYARREKDRERERERSRDRDRDRERDRDRDRERTRDRERDR
DHSPTPSVFNSDEERHRYRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSR
RRHDSEEGDSHRRHKHKKSKRSKEGKETSGEPAPEQENTEAAPVE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggtgaggtggagcggttggcggcggacctcggcggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaaacagagagaccagaggaagaaaaagct
agtgctccacccccacctggaagcgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaaaacaggagctccacagtatggttacggagcggcacct
gtgaatctcaatattaagacaggaggacgagcttatgggtcttctggtgcaaaagttaaa
ggggtggatctagatgcaccggggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggagctgatctctctgactatttcaac
tatgggttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaagttttaccagttacctcaaccacaaataaaattacggctgaagacaatgct
atggaagtaagaccaagtgcagagattctcgatggcagataccatcttttgaaggtacag
cagggcagaactggaaatttggagaaagagttggcagtacagtcgaccaaagctgatttc
acatctcctcctgcattactcaaatcaggaattccaacaaacaggcgattagctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgcgctaat
gaaaacagcaacatacaggttctttcagaacgatctaatcctgaagtagacaattttacc
aagccacctccatttttccctccaggagctccacctacccaccttccaccacctcctttt
ctcccaccccctccaactgtcagtactgctccacctctgatccccccaccaggtatacca
ataacagtgccaccaccaggctttccaccaccacctggcggtcctccaccttcccttata
cccacaatagaaagtggacattcttctgggtatgatggtcgttctgttcgtgcattttca
tatggcagtgataatgaagtggaactcaaaacaaaccatttattgaaggctctgttatca
atggctagcaaagcagataagcagagagtgggaagtcctctgtacttcacctttccgcac
cttgcaggttctgctccttcatggtctagtcttatggacaccagcaaacagtgggattac
tatgcacgaagagagaaggacagggaacgtgagagagagcgatcccgagatcgggatcgc
gaccgggaacgggaccgagacagagatcgagaacgtaccagagacagggaaagggaccga
gatcacagtccaactccaagtgtgttcaacagtgatgaagaacgacacagatacagagac
tatgcagaaagaggctatgaccgccatagaacaagtagagagaaagaagaccgacacaga
gataggagacacagagagaaagaagagactagacacaagtcatctcgaagcaacagcaga
cgtcgtcatgacagtgaagaaggggacagccacagaaggcacaaacacaagaaatccaaa
agaagcaaagaaggaaaagaaaccagtggggaacctgctcctgaacaggaaaacactgaa
gctgcccctgtggaatag
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