Caloenas nicobarica (Nicobar pigeon): 135988218
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Entry
135988218 CDS
T11056
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03020
RNA polymerase
cnic03420
Nucleotide excision repair
Brite
Enzymes [BR:
cnic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135988218 (POLR2B)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135988218 (POLR2B)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135988218 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
135988218
NCBI-ProteinID:
XP_065490071
LinkDB
All DBs
Position
4:complement(31697724..31714796)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagacatgcagtatgatgaagacgatgatgaaatcacccccgac
ttgtggcaagaagcctgctggatcgttattagctcctattttgatgaaaagggtctagtc
aggcaacagttggattcttttgatgaatttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttacaagctgaagcccagcatgccacaggagaagtggaagag
ccgccccggtatctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccatcacctatgatgcccaatgaagccagactgagaaaccttacgtat
tcagcccccttgtatgtggacataactaaaacagttattaaagaaggggaggatcagtta
cagacacagcatcagaaaacatttataggaaaaattcctattatgttacgttcaacatac
tgtttgttgaatggcttaactgaccgtgatctttgtgaactgaatgaatgcccacttgat
cctggtggctacttcatcatcaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtagatcttgtctggaaaattcctctcgaccaacaagtactatatgggttagcatgctg
gccagaggcgggcagggtgcaaagaagagtgctattggtcagcgcattgtagcaactttg
ccatacatcaaacaagaagttcccatcataattgtctttcgtgcactaggctttgtgtcc
gacagggacattttagagcacatcatatatgattttgaagatccagaaatgatggaaatg
gtcaagccttctctggatgaagcgtttgtcattcaggagcagaatgttgctctaaacttc
attggatcaagaggtgcaaagccaggtgtcaccaaagagaagagaatcaagtatgctaaa
gaagtcttgcagaaagaaatgctcccgcacgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagattgttgctggcagcactgggaagaaga
gagcttgatgacagggatcattatggcaacaaaagactggatcttgctgggccactgtta
gctttcctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacaa
aagtttattgacagagggaaagatttcaacttggaactggcaattaaaacaagaattatt
tcagatggtttaaagtattcactggcaactggaaactggggtgaccagaagaaagctcat
caggccagagcaggagtctctcaggtgttaaaccgcctgacttttgcatctacactttcc
catctgagacgcctgaattctccaattggtagagatggtaaactagcaaagcccagacag
ctgcacaatacactgtggggaatggtttgtcctgctgagaccccagagggtcatgctgta
ggacttgtgaagaatttagccctgatggcttacatttctgtggggtctcaaccatcccca
attttggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcagca
atagctgatgccaccaagatctttgttaacggctgctgggtaggaatacacaaagatcca
gagcagctcatgaataccctaaggaagctccgtcgtcagatggacatcattgtgtcggag
gtctcaatgattagagatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgtcgaccccttttaattgtggaaaaacagaaattgctgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaattacagttggcaggatctcgtggccagtggt
gtagtagagtacattgatacactggaagaagagactgtgatgctggcaatgactccagat
gacttgcaagagaaaggtgtggcctattgttcaacatacacacactgtgagattcacccg
tcaatgatcctgggagtatgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaaacaggctatgggagtttacattacaaacttc
cacgttcgtatggatacactggcacatgtattgtattatcctcagaagccccttgtaaca
acacgctccatggagtacttgcgatttagagaattaccagcaggtatcaattccattgta
gccattgcatcatatacaggctataaccaggaagactctgtcatcatgaaccgttctgct
gttgacagaggctttttcagatctgtattctatcgctcatacaaagagcaagagtctaaa
aaagggtacgaccaagaggaagtttttgaaaagccaacacgtgaaacttgccaaggcatg
agacatgcaatctatgacaaacttgatgatgatggtttgatagcacctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtaacactgcccgaaaatgaagatgaactg
gaaagcactaacagacgtttcacgaagagagactgtagcacttttctgcgaactagtgag
actggcattgtagatcaggtcatggtaacccttaaccaggaaggatacaaattctgcaag
attagggtacgctctgtaagaatccctcaaattggagataaatttgccagcagacatggt
cagaaaggaacctgtggtattcagtacaggcaagaggatatgcccttcacctgtgaaggc
atcacacctgatataattatcaaccctcatgccatcccttctcgtatgaccattggtcac
ttgattgagtgtcttcaggggaaggtttctgcaaacaagggagaaattggtgatgctaca
ccttttaatgatgctgtcaatgtgcagaagatttccaatcttttgtcagattatggctat
catctaagaggaaatgaggtcctttacaacggcttcactggtcgaaaaatcacatcacag
atcttcattggtcctacgtattatcagcgtttgaagcacatggtagatgacaaaatccat
tctcgtgcaagagggccaatccagatacttaacagacagcccatggaaggtagatctcgt
gatggtggccttcgttttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagagagattgtttgaagcttcagacccataccaagtccacgtctgtaac
ctctgtggaatcatggcgattgcaaacacaaggactcacacctatgaatgccggggatgc
cgtaataaaactcagatatctttggttcggatgccctatgcctgcaaactcctcttccaa
gaactgatgtccatgagtattgcacctcgtatgatgagtgtttag
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integrated database retrieval system
