Caloenas nicobarica (Nicobar pigeon): 135988235
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Entry
135988235 CDS
T11056
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135988235 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135988235 (NUP54)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135988235 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
135988235
NCBI-ProteinID:
XP_065490110
LinkDB
All DBs
Position
4:complement(787372..802563)
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AA seq
500 aa
AA seq
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MAFNFGATAGAGAANPTGAFGGFGTTTTTAAPAFSFSAPTNTGTSGLFGATQNKGFGFGT
SFGTGTGTGLGAGLGTGLGFGGFGTQQQQTTLGSGLFSQPAQTPAQSNQLINTASALSAP
TLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSLMPNNKDE
DGLVVLVFNRKETDIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVIIYVVER
SPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQVKQLLQNPPAGVDPI
IWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQTT
TMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQF
KGRLNELMSQIRMQNHFGTVRAEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDLED
IKLIEHGLNESIPIRGGVFS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaacttcggggccacggcgggtgccggtgccgccaacccgaccggtgcattt
ggaggatttgggacaactaccaccactgcagcaccagcgtttagtttttctgctcccacc
aatacaggcaccagcggactctttggtgctacccagaacaaaggctttggatttggtact
agttttggcacaggaaccggaactggcttgggtgctgggctgggaactgggctaggcttt
ggaggcttcggtacccagcagcaacagaccacattaggaagtggcttgttcagccagcct
gctcagacacctgcccagtcgaaccagctcatcaacacagccagtgcactctcggctcca
acactcttaggagatgagagagatgctattttggcaaaatggaaccagcttcaggccttc
tggggaacaggcaaaggctacttcaacaataacatcgctccagtggagttcacacaggaa
aaccccttttgcaggtttaaggctgtgggttacagtttaatgcccaacaacaaagatgaa
gatggcctcgtggtcctggtctttaatagaaaagaaacagatattcgaagccagcagcag
cagctcgtagaatcactacacaaaattctgggaggaaaccagaccctcactgtcaacgta
gaaggtgttaaaacgatgccagatgaccagacagaagtgatcatttacgttgttgagcgc
tcacccaatggcacttcgaggagagttcccgcgacgaccctctacgcccactttgaacaa
gccaacatcaaatcgtccctgcagcagctgggggtcagtctctccatggccagaacggag
ctttccccggcacaagtcaaacagctcctgcagaaccctcccgctggtgttgatcctatt
atatgggaacaagccaaagttgataatcctgatcctgacaagcttattcctgtgccaatg
gtgggtttcaaggaactgttgagaagactgaaggtccaagatcagatgaccaaacagcat
caaactcgattagatataatatcagaagatatcagtgagctgcagaaaaaccaaacaaca
actatggcaaaaattgcacagtacaaaaggaaactgatggcgctttctcacagaacatta
caggtgttaataaagcaggagatccaaaggaaaagcggctatgccattcaagcagatgaa
gagcagcttcgtgtacagttagatacaattcagtgtgaacttaacgcacctacacagttc
aagggcagactgaatgagctcatgtcccaaatcaggatgcaaaaccacttcggcaccgtg
cgggctgaggagcgctattacatcgatgcagacctcttaagggaaatcaagcaacatctg
aagcagcagcaagaaggcctgagtcacctaatcagcattatcaaggatgacctggaggac
atcaaacttatagaacatgggctgaacgagagcatccccatcagaggaggagtcttcagt
tga
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