Caloenas nicobarica (Nicobar pigeon): 135988338
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Entry
135988338 CDS
T11056
Symbol
HPSE
Name
(RefSeq) heparanase
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00531
Glycosaminoglycan degradation
cnic01100
Metabolic pathways
Module
cnic_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
135988338 (HPSE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
135988338 (HPSE)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
135988338 (HPSE)
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Heparan sulfate / Heparin
Enzymes
135988338 (HPSE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
135988338
NCBI-ProteinID:
XP_065490318
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All DBs
Position
4:24491387..24504671
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AA seq
528 aa
AA seq
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MMLLLLLPLLLGLGLAGGRQAAVLRLGLRGSPRGEVSPAFLSLTLDASLARDPRYVALLS
NPKLRALATALSPGFLRFGGTETDFLIFDPNKDSTSEEKILWELQAQQEACGLRTAFAPV
QKLLLAQWPSQEKLIIAEHNRKKHKNTTITGSTLDILYSFANCSGFHLVFGLNALLRKAG
LQWDSSNAQVLLDYCSSQRYNISWELGNEPNSFRKKSGIYVDGFQLGQDFIHLRQLLSNY
TLYRHAKLYGPDVGQPRKHTQRLLRSFLKSGGKVIDSVTWHHYYVNGRKATREDFLSPEV
LDTFATAVHKVLEIVDGTVPGKKVWLGETSSAYGGGAPRLSNTYIAGFMWLDKLGLSARQ
GIDVVMRQVFFGAGTYHLVDANFEPLPDYWLSLLYKKLVGTKVLQVSLVGANERKLRVYL
HCTNPLHPKYREGDVTLFALNLYNVTQHLQLPNYLWSKHVDQYLLLPHGKENILSRSIEL
NGRVLQMVDDKTLPELIEKPLGPGSTLGLPAFSYGFYVIKNAKAIACI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgctgctgctgctgccgctgctgctggggctggggctggcgggggggcggcag
gcggcggtgctgcggctggggctgcggggcagcccccgcggggaggtgagccccgctttc
ctctccctcaccctggacgccagcctggcccgggacccgcgctacgtcgccttgctcagc
aatcccaaactgcgtgccttggcaacggctctatccccgggcttcctgaggttcggtggc
accgagacagattttctcatctttgaccccaacaaggattcaacttcggaagaaaaaatc
ctttgggagcttcaggcccaacaagaggcttgtggcttgaggacggcgtttgctcctgtt
cagaagctgctgttggcccagtggcccagccaggagaagctgattattgcggaacataac
cggaaaaagcacaaaaacaccacaattacaggaagtacgctggatattctctacagcttt
gcaaactgctcagggtttcacctggtctttgggctcaatgccttgctgaggaaagctggg
ttgcagtgggacagctcgaacgcccaggtgctgctggactattgctcctcacagaggtac
aacatctcctgggagctcgggaacgagcccaacagcttcaggaagaaatctggcatctac
gtcgacggcttccagctggggcaagattttattcacttacgccaactcctgagtaactat
accctctaccgacacgcaaagctctatggtcccgacgttgggcagccccgcaagcacacg
cagaggctgctgaggagcttcctgaaatcgggagggaaggtgattgactccgtcacgtgg
caccactactatgtaaatggacgaaaagctacaagggaggatttcttgagccccgaagtg
ctggacacctttgccacagctgtacacaaagtcctggagattgttgatgggaccgtgccc
ggcaagaaggtctggcttggagagaccagctctgcctatggaggaggagctcccaggctg
tccaacacctacattgctggctttatgtggttggacaaacttgggctttcggccaggcag
gggattgacgtggtgatgagacaggttttctttggagcagggacctatcacctggtggat
gccaactttgaacccttgccggactactggctctcgctgctctacaagaagctggtgggc
accaaggtgctgcaggtcagcctggtgggagccaacgagaggaagctccgtgtctacctc
cactgcacgaacccccttcacccaaagtacagagaaggggacgtaacgctgtttgcctta
aacctctacaacgttacccaacatttgcagctgcctaattacttatggagcaagcatgtg
gatcagtacctcttgctgcctcatggcaaagagaatatactttccaggtctattgagctg
aatggccgtgtgctgcagatggtggatgacaaaacgctgccagagcttatcgaaaaaccg
cttggtcctggcagcacgctcggccttccagccttctcgtacggcttttatgttatcaaa
aacgccaaagctatcgcttgcatttaa
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