Caloenas nicobarica (Nicobar pigeon): 135988362
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Entry
135988362 CDS
T11056
Symbol
FHIP1A
Name
(RefSeq) FHF complex subunit HOOK-interacting protein 1A
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135988362 (FHIP1A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135988362 (FHIP1A)
Membrane trafficking [BR:
cnic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
135988362 (FHIP1A)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
135988362 (FHIP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
ATP-synt_Eps
Motif
Other DBs
NCBI-GeneID:
135988362
NCBI-ProteinID:
XP_065490351
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All DBs
Position
4:32445369..32482629
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AA seq
1006 aa
AA seq
DB search
MSSGTGISKNRQVPSLQGVDPETCMIVFRTHWAQVLKILEKHDPLKNTQAKYGAISPDEA
STVQNYVEHMLFLLIEERAKDASMGPILEFVVSENIMEKLFLWSLRREFTDETKIEQLKM
YEMLVTQSHQPLLHHKPILKPLMMLLSSCSGTATPTVETELVVLLNQLCSIIAKDPSILE
LFFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENNLVANHIAENTY
FCPVLATGLSGLYSSLPTKLEEQGEEWHCLLKDDWLLSPALVQFMNSLEFCNAVIQVAHP
LIRHQLVNYIYNGFLVPVMAPALHKVTVEEVMTTTAYLDLFLRSVSEPALLKIFLRFILL
HRHENVHILDTLTSRINTPFRLCVVSLALFRTLIGLHCEDVMLQLVLRYLIPCNHMMLSQ
RRAVKERDCYSVSAAKLLALTPVCCSTGITLTLESQGKDYILWTKAAQTKDSGRRSSEST
CIVEYGRAVDISYLQYLAEAQEAILQCLKDCKVWSALYDGVNPDPDTFIQTLAEENSTDV
EHPMFRLQQRTPSTCSSSQVTPFSEKMQLELEWDDSYDTGISPGSDVSSPQPYDDLGSTE
MQPPAEPPKHIQEMKKNAIMLIKGSYIEESDFQDDVMVYRLCAQKDARDDDNSKEKALNV
ARKHEVQSQTVVNGPLAKSQLEMNLDEHSMRNSSSTQGVMKEQINQKIIENDPQPDLELK
LSPQEADRNVSVTLLSTDGEDFIAQYDKIIKELDPNSTSLEEQNLDNPDPVSPAEEEEDF
ENFSADTPSVESLSSPFGPKEDVSPRHAARNQSAPFTGPFISVVLSKLENMLENSLHVNL
LLIGIITQLASYPQPLLRSFLLNTNMVFQPSVRSLYQVLASVKNKIEHFASIEKDFPGLL
LEAQQYLLFRMDVSDAAEESLTKGNVQHSSNTGKGRNLSEAYPAVLQPFLGQKGKKGLAH
PSLPARVRNAVLAAALFPEFLKELAALAQEHSILCYKILGDFEDYY
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggaactggtatcagcaaaaatcggcaggttccgagcctgcagggtgttgac
ccagaaacatgcatgatagtgtttagaacacactgggcacaggttctgaaaatcttagag
aagcatgatcctttgaaaaacactcaggcaaagtatggcgcaatttcacccgatgaggcc
agcactgttcagaattatgtggagcacatgcttttcttattaattgaggagcgagcaaag
gatgcctcaatggggcctattctggagtttgtggtctccgaaaacatcatggagaagctt
tttctttggagcctacgacgagagttcaccgatgagacaaaaattgagcaactgaaaatg
tatgaaatgctagtaacccagtctcatcagcctttgctgcaccacaagccgatcctgaag
cctttgatgatgttgctgagctcctgctcaggaacagccactccaacagtggaaacggag
ttggtcgtcctcttgaaccagctctgctctataatagccaaagatccctccattttagaa
ctgtttttccacaccagtgaggaccaaggagctgccaatttcctcatattttccctgctg
attcccttcatccatcgagaaggaacagtaggccaacaggcccgtgatgcgctacttttc
ataatgtctctttctgcagaaaacaaccttgttgcaaaccacatagcagaaaacacctat
ttttgcccagtgctagcaacaggactcagtggcctctattcatctttgcctacaaagctg
gaagaacaaggagaggagtggcactgcctgctgaaagatgactggctcttgtcaccagcc
cttgtacagttcatgaattcccttgaattttgcaatgctgtgatacaggtggcacatccc
ttgatacgtcaccagcttgtgaattacatttacaatggatttttggtgccagtaatggct
cctgcactccataaggtgactgtggaagaagtgatgactactactgcatacctggatctc
tttttgcgtagtgtttcagagccagcgctcctcaaaattttccttcgttttattttgctg
caccgacatgagaatgtgcatatcctggatacacttacgagccgaatcaacactccattc
cggctctgcgtggtctccttggccttgttcagaacgctcattggcttgcattgtgaagat
gtgatgttacagctagttttaaggtacctgatcccatgtaaccacatgatgttgagccag
cggcgggctgtgaaagagagagactgttattctgtatctgctgcaaaactgcttgccctg
acaccagtctgctgctccactggcatcaccttgacacttgaaagccaaggaaaagattat
attctatggacaaaagcagcacaaactaaagattctggtaggcgctcttctgaatctact
tgcattgtggaatatggaagagctgtggacatcagctacttgcagtacctggcagaagct
caagaagccatcctccagtgtctgaaagattgtaaggtttggtctgccttgtatgatgga
gtaaaccctgatccagacacctttatccaaactcttgctgaggagaacagtacagatgtg
gaacatcccatgtttcggctccagcaaaggacacctagcacgtgtagctcctctcaagta
actccattcagtgagaagatgcagttggagctagaatgggatgatagttatgatacaggg
atttctcctggttctgatgtgagctcaccacaaccgtatgatgatctgggaagcacagag
atgcagccacctgcagagccaccaaaacacattcaagaaatgaaaaaaaatgccatcatg
ctcatcaaaggatcttacatagaggaatcagactttcaggatgatgttatggtgtacagg
ttatgtgcccagaaggatgctcgagatgatgataactccaaggagaaagctttaaatgta
gccagaaaacatgaggtccaaagccagactgtagtcaatgggcctcttgcaaagagccag
ctggaaatgaacttggatgagcacagtatgagaaattcaagctcgactcaaggtgtaatg
aaagaacaaataaaccagaaaattattgagaatgatccacagccagacttagagttgaag
ctttctcctcaggaggcagatcgtaacgtaagtgtaacactgctgagcacagatggtgag
gatttcattgcacagtatgacaaaattattaaggaactggatccaaacagtacaagcttg
gaggagcagaacttggataatcctgaccctgtctctcctgcagaagaggaggaggacttt
gagaatttctcagcagacaccccttctgtggagagcttgtcatctccctttggaccaaag
gaggatgtctctcccaggcatgctgcaaggaaccagagtgctccatttacaggaccgttt
atcagcgtagtgttgtcaaagctggagaacatgctggagaattccttgcatgtaaatttg
ctgcttattgggatcattactcagctggcaagttatccacagcctcttcttcgctccttt
ctgctcaacaccaacatggtgtttcagcccagcgtgcggtcactttatcaggtgctggca
tctgtgaaaaataaaattgaacattttgcttccattgaaaaagactttccaggtcttctt
ctggaggcccagcagtacttgctttttcgtatggacgtgtctgatgctgcagaagaatcg
ctaaccaaaggtaacgtccagcacagcagcaacacagggaaaggaaggaacctctctgaa
gcttacccggcggtactccagcctttcctaggacagaaaggaaagaaaggcctggctcat
cccagcctccctgcacgcgtgaggaatgcggtactcgcagctgcccttttcccggagttc
ctgaaggagctggcagctcttgcccaggaacattccattttatgttacaaaatactgggg
gattttgaggattattattag
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