Caloenas nicobarica (Nicobar pigeon): 135988509
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Entry
135988509 CDS
T11056
Symbol
DCTN1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04814
Motor proteins
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135988509 (DCTN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135988509 (DCTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135988509 (DCTN1)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135988509 (DCTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135988509 (DCTN1)
Membrane trafficking [BR:
cnic04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
135988509 (DCTN1)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
135988509 (DCTN1)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
135988509 (DCTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
135988509
NCBI-ProteinID:
XP_065490592
LinkDB
All DBs
Position
4:complement(79180655..79253911)
Genome browser
AA seq
1261 aa
AA seq
DB search
MSAEGGSKPLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRK
YFTCEENHGIFVRQSQIQVFEDGADTTSPETPESAALKVPKRDAVDAAKATKLTSARRPK
PTRTPSSAASSGTAGPSGSASASGGEMSSSEPSTPAQTPLVAPVIPTPALASPVAPPVPS
PTKPSSATVQCPQDGQEEENLRSQVRDLEEKLETLKIKRNEDKAKLKELEKYKIQLEQVQ
EWKSKMQEQQAELQKRLKEAKKEAKDALEAKERYMEEMADTADAIEMATLDKEMAEERAE
SLQQEVDSLKEKVEYLTMDLEILKHEIEEKGSDGAASSYQVKQLEEQNARLKEALVRMRD
LSASEKQEHVKLQKQMEKKNTELESLRQQREKLQEELKQAEKTVDELKEQVDAALGAEEM
VETLTERNLDLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMATARVREA
EKRVEAAQETVADYQQTIKKYRELTAHLQDVNRELMSQQEASAEKQQQPPPEMFDFKIKF
AETKAHAKAIEMELRQMEVQQANRHVSLLTSFMPDSFLRHGGDHDCVLVLLLIPRLICKA
ELISKQAQEKFDLNENCAERSGLRGAAGEQLSFAAGLVYSLSLLQATLHKYEQALNKCSV
EVYKKVGMLYPEMSVHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLADQA
EDCTMQLADHIKFTQSALDCMGVEVSRLRAFLQAGQEASDLPLLLKDLDTSCSDIRQFCK
KIRRRMPGTDAPGIPAALGFGQQVSDTLLECRKHLTWVVAVLQEVAAAGAQLIAPLAENE
GLQAVKLEDLAFKASEQIYGTPGINPYECLRQSCSILIATMNKMATAMQEGEYDADRPQS
KPTPPAELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEK
KLDSASKDADDRVEKIQTKLDETQTLLKKKEKEFEETMDALQADIDQLESEKVELKQRLN
NQSKRTIEGLRGAPASGVASIVSGIAGEDQQRGVSAGPVTGGGSGPVQVKDSPLLLQQID
ALQLSIKHLQSENNRLKGAQMKLALASLAPLQVPRVAVPKARQAEALATHALYRRSSQLL
ETLYQMSANAKVVNMKQNKSARSSSARLLEQTARLWSLKTTIDALRDDTMREMVQQQLGA
SVPTNFGTFPSSSFLKAKQEQEAGMAHYGRVTFPCAPGQGREHRLLLTPDLLHRLRSHFG
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagggcggcagcaagcccctcaaggtgggctccagggtggaggtcatcggc
aagggccaccgcggcaccgtggcctacgtcggggccaccctgttcgccacgggcaagtgg
gtcggcgtcatcctggatgaagcgaagggcaagaacgacgggactgtgcagggcaggaaa
tacttcacgtgcgaggagaatcacggcatcttcgtgcggcagtcccagatccaagtcttt
gaagatggagctgacacaacgtccccagaaacaccagaatcggctgccctgaaggtcccc
aaaagagatgccgtggacgccgccaaagccaccaaactgaccagcgcccggcggcccaag
cccacccggacccccagctcagcagcgtccagcggcacggccgggccctcgggctcggcc
tcggcctcgggcggggagatgagcagcagcgagcccagcacaccggcccagaccccgctg
gtggccccggtcatcccaacgcccgccctggcctcgccggtggcaccgccggtgccctcg
cccacaaagcccagctcggccaccgtgcagtgtccccaggacggccaggaggaggaaaat
ttgcgttctcaagtcagggacctggaggagaaattggagactctgaagataaagcgaaat
gaagacaaagcaaagcttaaagagctggagaagtacaagatccagctggagcaggtgcag
gagtggaagagcaagatgcaggagcaacaggctgagctgcagaagcggctgaaggaggcc
aagaaggaagccaaggatgccctggaagccaaggagcgctacatggaggagatggcggac
acggctgatgccatcgagatggccacgctggacaaggagatggccgaggagcgagccgag
tccctgcagcaggaggtggactccctgaaggagaaggtggaatatctcaccatggacctg
gagatcctgaaacacgagatcgaggagaaaggctcggacggagccgcctccagttaccag
gtgaagcagctggaggagcagaacgcgaggctcaaggaggctcttgtgaggatgcgggac
ttgtctgcctcagagaagcaggaacatgtgaaacttcagaagcagatggagaagaagaac
acggagctggagtccctgcgccagcagagggagaagctgcaggaagagctgaagcaggca
gagaagacggttgatgagctgaaggagcaggtggatgctgctctgggggctgaagagatg
gtggagacgctgaccgagagaaacctcgacctggaggagaaggtccgggagctgcgcgag
actgtcggggacctggaagccatgaacgagatgaacgatgagctgcaggaaaacgcgcgg
gagacagagctggagctgcgggagcagctggacatggccacggcgcgggtgcgcgaggcc
gagaagcgcgtggaggctgcacaggagaccgtggccgactaccagcagaccatcaaaaag
taccgagagctgactgcacacctccaggacgtgaaccgagaactcatgagtcagcaagaa
gcgtctgccgagaagcagcagcagccgcctcctgagatgttcgacttcaagattaaattt
gcagagacgaaagcgcacgccaaggccatcgagatggagctgcggcagatggaggtgcag
caggccaaccgccacgtctccctcctcacctccttcatgcccgacagcttcctgcgccac
ggcggggaccacgactgcgtcctggtgctgctgctcatcccgcgcctcatctgcaaggcc
gagctgatcagcaaacaggctcaggagaagtttgatctgaacgagaactgtgcggagcgc
agcgggctgcggggcgctgccggggagcagctcagcttcgctgcagggctggtgtattca
ctgagcctcctgcaagccaccctgcacaaatacgagcaggccctgaacaagtgcagcgtg
gaggtctacaagaaggtggggatgctgtaccctgagatgagcgtccacgagcggtcgctg
gatttcctgatcgagctgctgcacaaggaccagctggacgagacggtcaatgtggagcca
ctgaccaaagccatcaagtactatcagcatctgtacagcatccacctggctgaccaggct
gaggactgcaccatgcagctggccgaccacatcaagttcacccagagcgccctggactgc
atgggggtggaggtgagccgcctgcgcgccttcctgcaggctgggcaggaggcgtccgac
ctgccgctgctgctgaaggacctggacacgtcctgcagcgacatccgccagttctgcaag
aagatccggcgccgcatgcccgggacggacgcgccggggatccccgcggcactgggcttt
gggcagcaggtgtcagacacgctgctggagtgccgcaagcacctgacgtgggtggtggcc
gtgctgcaggaggtggccgctgccggggcacagctgatcgctccgctggccgagaacgag
ggactgcaggcggtgaagctggaggatctggccttcaaagccagcgagcagatctatggc
accccgggcatcaacccctacgagtgcctgcgccagtcctgcagcatcctcatcgccacc
atgaacaagatggccacagccatgcaggagggcgagtacgacgcagacaggccacagagc
aagcccacccccccggccgagctgcgggccgccgctcttcgggcagagatcacggacgct
gaggggctggggctgaagctggaggacagggagacggtcatcaaggagctgaagaagtcc
ctcaagatcaagggcgaggagctcagcgaggccaacgtgcggctcagcctcctggagaag
aagctggacagtgcgtccaaggacgccgacgaccgcgtggagaagatacagacgaagctg
gatgagacccagacgctgctcaaaaagaaggagaaggagttcgaggagaccatggatgcg
ctgcaggctgacatcgaccagctggagtcggagaaggtggagctgaagcagcgcctgaac
aaccagtccaagcgaaccatcgagggcctgcgcggagcccccgcctcgggggtggcctcc
atcgtgtccggcatcgccggagaggaccagcagagaggtgtcagtgctggcccggtgaca
ggaggtggctcgggacccgtgcaggtgaaggactcgcccctgcttctgcagcagatcgac
gccctgcagctctccatcaagcacctccagagcgagaacaaccggctcaagggcgcgcag
atgaagctggcgctggccagcctggcgccgctgcaggtgccgcgggtcgcggtgcccaag
gcccggcaggccgaggcgctggccacgcacgcgctgtaccgcaggagcagccagctcctc
gagaccctctaccagatgagcgccaacgccaaggtcgtcaacatgaagcagaacaagtcg
gctcggagctcgtcggcgcggctgctggagcagacggcgcggctctggtccctcaaaacc
accatcgacgccctgcgggatgacacgatgagggagatggttcagcagcagctgggtgcc
agtgtccccaccaacttcggcaccttcccttcctcctccttcctgaaggccaagcaggag
caggaggctggcatggcgcactacggccgagtgacgttcccctgcgcgccggggcagggc
cgggagcaccggctgctcctcacccccgacctgctccaccggctgcgcagccacttcggc
tcctaa
DBGET
integrated database retrieval system
