Caloenas nicobarica (Nicobar pigeon): 135988644
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Entry
135988644 CDS
T11056
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135988644 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135988644 (SPATA13)
Membrane trafficking [BR:
cnic04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135988644 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Myosin_TH1
PH_5
Motif
Other DBs
NCBI-GeneID:
135988644
NCBI-ProteinID:
XP_065490834
LinkDB
All DBs
Position
1:194648704..194694240
Genome browser
AA seq
1178 aa
AA seq
DB search
MGSFKKLKSSVLQGIQTKECSDILNENGVDNHVSNGEVMRVQTNRYSYSGPLHDFQNAVD
GLASDCSDAEESDESFLRNTHRSRSIRRAYGAGRINLLDTDKVQSHHNCTRPTSPVVAEP
KICEILVKDSENNRIIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKVGNEKQMPTRTVSV
TSADSDKTGGNPERRSKRWKSPIRAKDFDRVLKLVSNVTDVAWKKDAPKSMAPSPSEQSQ
RARSNSRLHDDYSRRVSSSTDHDRKRCTSPVSSPDSSLPGTPCLQSPTVAQDKEAEMNVA
VAEDRSLRTSSGIPDSDSLSPTLNDISPFPNEVFCSDSDEPKATQQFTYEAENPHVPVRP
TTPKPQSPTAEKVKCNMNFQCPNHHSTLSLSSSESEEKLEVPGMKLSRNPVCFQDSVQTV
YYDDGNEDSGISSHSQLSLNLASGAEEKKEEVVSDDHWKKSPCQDEEKTDTQRVAPRRWG
SGKRSRPRPLSDYGQMSIRSLSIPEDTVAVESQKTDCTDGENQPGLASIGSAIQSNTVGY
HRGRKRRPISVIGGVNFYGRGPPEEIEGLLTQPATRPPVPAHQVPPYKAVSARFRPLTFS
QSTPIGLDRVGRRRQMRTSNVAADGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGE
QLAINELISDGSIVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWF
PASFVRLRVNQEEVPENGSSIQDEEQDADMSKHRQKIAENKDQMRTNVIQEIMNTERVYI
KHLKDICEGYIRQCRKHTGMFTAAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSE
IGSCFLQHQEGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFL
LTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRRLESIDKIAR
WQVSIVDWEGPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDIL
YYKDRIDMDEMEIVDTEDGRDKDFNINVKNAFKIINRATEDIHLFCAKKQEDKKRWMEAC
ENERRRVQEDKEMGMEISENQKKQAMQNARKSRHGKIKGVSYNGCPVPPPHQSLHPIHQR
HITVPTSIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggatctttcaagaagttgaaatcttcagttctccaaggaattcaaacaaaggaatgc
tcagacatcttaaatgagaacggtgtagacaaccatgtttcaaacggggaagtaatgaga
gttcagactaacaggtattcttattcggggcctttacatgatttccagaacgcagtggat
ggtttagcttctgactgctctgatgcagaggagagcgatgagtctttcctgaggaatact
catcgctcacgcagcatcaggcgggcttacggtgctggccgcataaacttgctagacacg
gataaagttcagagtcatcacaactgtaccaggccaacatcacctgtcgttgcagagcca
aagatctgtgaaattttagtgaaagactctgaaaacaacaggatcatttatcggagaagc
aaaagttcagataatttgaactttctgaaaaaaagctcattcaaacgaaagtccacctca
aacctcaccgacctcaaggttggaaatgaaaaacagatgccaacaaggactgtgagtgtt
acttctgctgactcggacaagactggtgggaaccctgagaggagatccaagcgatggaag
agccctatcagggcaaaagattttgaccgagttttgaaacttgtcagtaacgttacagat
gtcgcatggaagaaggatgcccctaagagcatggctccttctcccagcgagcagtcccag
agagcaaggtcaaacagcagactgcacgatgactactcccgcagggtttccagcagcaca
gatcatgacagaaagagatgcacctccccagtgtctagtccagactcttccttgccagga
acaccttgtctgcaaagccccacggttgctcaggataaagaggctgagatgaatgtagct
gttgctgaagacaggagcctcaggacgtcatcaggtatcccagactctgatagcttatca
cccacgctgaatgacattagtccatttcccaatgaagtgttttgttcggactcagacgaa
ccaaaagctacccagcagtttacgtatgaagctgaaaaccctcacgttccagtcaggccg
actactccaaagcctcaaagtcccactgcagagaaggtgaagtgcaatatgaatttccag
tgcccaaaccatcacagcacgttgtcactgagctcatcggagagcgaggagaagcttgag
gtaccggggatgaagctgagcaggaatcctgtttgcttccaggactcggtgcaaactgtg
tactatgatgatggaaatgaagatagtggcataagcagccactctcagctgagcctcaat
ttagcctctggtgctgaagagaaaaaggaagaggttgtttctgatgaccactggaagaag
tccccatgccaggacgaagaaaagacagacacacaaagggtcgcacccaggagatggggc
tctggaaaaagatctcggcccagacctctctcagactacggccaaatgtccatcagaagt
ctctctataccagaagatacagttgcggtggagtcacagaagacagactgcacggatgga
gaaaatcagccaggactggcttccatcgggtctgcgatccaaagcaatacagtaggctac
cacagagggcgaaaaagaagacccatctctgtaataggtggggtcaatttctatggcaga
ggtccgccagaagagatagaaggtctgctgacacaacctgcaacacggccacctgttcca
gcacaccaggtccccccttacaaagctgtttccgccaggttccggcccctcaccttttca
caaagtacccccatcggcctggaccgagtgggacgaaggcggcagatgagaacatccaac
gttgctgcagatggtgggactgaatcttcagccttagtggatgacaatggcagtgaggaa
gactacagttacgaggagctctgccaagccacccccaggtacctgcagcctggaggggaa
cagctagcaattaatgagctgatcagcgatggcagcattgtctatgcagaggctctctgg
gaccatgtgactatggatgatcaagagctgggcttcaaagctggagatgtcattagagtc
ctagaagcttccaacaaagactggtggtggggaagaaatgaagacaaggaagcctggttt
ccagcgagctttgtcaggctgcgagttaatcaggaagaagtgccagaaaatggtagtagt
atccaggatgaagaacaagatgcagatatgagcaaacatcgccagaaaatagctgaaaac
aaggatcagatgagaaccaacgttatacaggaaattatgaacacagaacgagtctatatc
aagcatctcaaggacatctgtgagggttatatccggcagtgtcgtaaacatacaggaatg
ttcaccgcagctcagttaagcaccatttttggaaatattgaagatatttacaagttccaa
aggaagtttctgaaggatcttgagaaacagtacaacaaagaggaacctcatctgagtgaa
atagggtcatgttttcttcaacatcaagaaggctttgctatttattcagagtattgtaac
aatcatcccagtgcctgcattgaactttccaaactaatgaaacagggcaaataccgtcac
ttctttgaggcctgtcgcttgcttcagcagatgattgacattgccattgatggttttctt
ctcacacccgttcagaaaatctgcaaataccctctgcagcttgcagaattgctcaaatac
accactcaggagcacagtgattataacaacataaaagccgcatatgaggctatgaagaac
gtagcatgtctgatcaatgagcgaaaacgaagactagaaagcatagacaagattgcacgt
tggcaagtctctatcgtagactgggagggaccagatgtgttagccagaagctctgaactg
atccactcaggagaactgaccaaaatatcaaagcaaggcaaaagccagcagaggactttc
ttcctttttgaccaccagctcgtgttctgtaagaaggacctactgaggagggacatcttg
tattataaggatcgtattgacatggatgagatggaaattgtggacactgaagatggcaga
gacaaagactttaacattaatgttaagaatgcttttaagataataaacagagcaacagag
gacattcatttgttctgtgcaaaaaaacaggaggataaaaagagatggatggaggcttgc
gaaaatgaaaggagaagagttcaggaagacaaggaaatgggaatggagatctcagaaaat
cagaagaaacaagctatgcagaatgcccgtaagtcaaggcatggaaaaattaaaggtgtc
agctataacgggtgtcctgtgcctcccccacaccaaagcctgcatcctatccatcagcgc
cacatcactgtgcccaccagcatcccgcagcagcaggtttttgccctggcagaacccaag
cggaagccatccctcttctggcacaccttcaacaaactcacccccttcaaaaagtga
DBGET
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