Caloenas nicobarica (Nicobar pigeon): 135988774
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Entry
135988774 CDS
T11056
Symbol
EBF4
Name
(RefSeq) transcription factor COE4 isoform X1
KO
K09103
early B-cell factor
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135988774 (EBF4)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
135988774 (EBF4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
135988774
NCBI-ProteinID:
XP_065491052
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All DBs
Position
4:79104182..79122248
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AA seq
677 aa
AA seq
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MARAGGAAGPRRPVLLLMVLVAAAGRRGRGAGRRRGGGPPGPSGPPGPPTPPGPPSRPLL
LLLPLLPPPPLPPPPRAAPAAAAARPEPLPRGGLPMKEEPLTAGLPSVRWLQGTGILDAS
TAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLAMYDRQGQPVEIERTSFIDFVEKEREQN
GEKTNNGIHYRLQLLYSNGLRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIM
CSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVN
VDGHVLAVSDNMFVHNNSKHGRRARRLDPSEAATPCIKAISPSEGWTTGGATVIVIGDNF
FDGLQVVFGTVLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTAL
NEPTIDYGFQRLQKVIPRHPGDPERLPKEVLLKRAADLVEALYGLPHGNQDVLLKRAADV
AEALYSVPRAPAQLSSLAGTHGPPGVMGVGSFGSQLPSTMGDSPQGPEQGYARGTGSVSP
RGYGPSPTPQPAGYSGSAGITGYGGGMAGLGVPGSPSFLNGSTANSPYAIVPASPPLGAS
SITLPAGAAATPSGGFSFSPVNMISAVKQKSAFAPVVRPQPSPPPACASASSLTDPAFED
SDKFHAPARPLQGLAYS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggccggcggggcggcggggccgcggcgcccggtgctgctgctcatggtgctg
gtggccgcggcggggcggcggggccggggcgcggggcggcggcggggaggcggccccccc
ggcccctccggtccccccgggcccccgacgccccccgggcccccctcccggccgctcctg
ctgctgctgccgctgctgccgccgccgccgctgccgccgcccccccgcgccgcgcccgcc
gccgccgccgcccgcccggagccgctgccccgaggggggctgcccatgaaggaagaaccg
ctgaccgccgggctgccctccgtccgctggctgcagggcaccggcatcctggacgccagc
acggcagcgcagagcggggtgggcctggcccgcgcccactttgagaagcagccgccgtcc
aacctgcgcaaatccaacttcttccacttcgtcctggccatgtacgaccggcagggccag
cccgtggagatcgagcgcacctccttcatcgacttcgtggagaaggagcgggagcagaac
ggcgagaaaaccaacaacgggatccactaccggctgcagctgctgtacagcaacgggctc
cgcaccgagcaggacctctacgtgcgcctcatcgactccatgtccaagcaggccatcatc
tacgaggggcaggacaagaaccctgagatgtgccgggtgctcctcacccacgagatcatg
tgcagccgctgctgtgacaagaagagctgtgggaaccgcaacgagaccccctccgacccc
gtcatcatcgacaggtttttcctcaagtttttcctcaaatgcaaccagaactgcctgaag
aacgcggggaatccccgggatatgcggcgcttccaggtggtggtgtccacgacggtgaac
gtggacgggcacgtcctggccgtgtccgacaacatgttcgtgcacaacaactccaagcac
ggccggcgggcacggcgcctcgacccctccgaagcagccaccccctgcatcaaagccatc
agccccagcgagggctggaccaccggaggtgccaccgtcatcgtcatcggggacaacttc
ttcgacgggctgcaggtggtcttcggcaccgtgctggtgtggagcgagctcatcacgccg
cacgccatccgggtgcagacccccccgcggcacatccccggcgtggtggaggtgacgctg
tcctacaagtccaagcagttctgcaagggcgccccgggacgcttcgtgtacaccgcgctg
aacgagcccaccatcgactacgggttccagcggctgcagaaggtcattccccggcacccc
ggggaccccgagcgcctgcccaaggaggtgctgctgaagcgggcggctgatctggtggag
gctctgtatgggctgccccacggcaaccaggacgtgctgctgaagcgcgcggcggacgtg
gccgaggcgctgtacagcgtcccccgcgcccccgcacagctctcctcgctggccggcacc
cacggcccccccggcgtcatgggggtcggctccttcggcagccagctccccagcaccatg
ggcgactcgccgcagggacccgagcaagggtacgcccgcggcacgggcagcgtctcgccg
cggggctacgggcccagccccacgccgcagccagcggggtacagcggcagcgccggcatc
accggctacggcggcggcatggccgggctgggggtgcccggctcccccagcttcctcaac
ggctccacggccaactccccctacgccatcgtgcccgccagccccccgctgggcgcctcc
tccatcaccctccccgcgggcgccgccgccacccccagcgggggcttctccttctccccc
gtcaacatgatctcggccgtgaagcagaaaagcgccttcgcccccgtggtgcggccgcag
ccgtccccgccgcccgcctgcgccagcgccagcagcctgacagacccggcgttcgaggac
tcggacaagttccacgcgccggcgcggccgctgcagggactggcctattcctaa
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