Caloenas nicobarica (Nicobar pigeon): 135988928
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Entry
135988928 CDS
T11056
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04136
Autophagy - other
cnic04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135988928 (ATG13)
04136 Autophagy - other
135988928 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135988928 (ATG13)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135988928 (ATG13)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135988928 (ATG13)
Atg1 complex
135988928 (ATG13)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135988928 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
135988928
NCBI-ProteinID:
XP_065491376
LinkDB
All DBs
Position
5:41972630..41996102
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AA seq
554 aa
AA seq
DB search
MLPYAMDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAI
KDIPEVTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSY
TVYNRLSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGT
VGTPVGTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAGE
DNGAVYPSVEDSQEVCTTSFSTSPPSQCVFTVTKTHFQTPPPVVTDTLKVPVMGLAFSHQ
LSSSRLSYQPAALGVGSADMGYPVLFAGGLNAAHPHQLIGPGKEGGVPPIPSQPAHGTQA
DQERMCTPLDGVHYSAATPSSSEDTETVSNSSEGKCGSPHDLLETIFIRKVGAFVNKPIN
QVTMANLDIPFAMFAPKNVELEDNDPMVNPPDSPETESPLQGSLHSEGSSGSSTGNTHDD
FVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHE
KNVKEFDAFVETLQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttgccatatgcaatggacactgatctcagttcccaggacaggaaggacctggacaag
ttcatcaaattttttgctttaaagacggtacaagtaattgtccaggcccgacttggagag
aaaatctgtacccgatcatcatcctccccaacaggctctgactggttcaatttagcaatc
aaagatataccagaggttactcatgaagcaaagaaagccctggccggacaactgcccgct
gttggacggtctatgtgtgtggagatttctctcaaaacctcagagggggactccatggag
ctggaaatttggtgtctagaaatgaatgaaaagtgtgacaaagaaatcaaagtttcatac
accgtatacaacaggctgtctctgctgctgaagtctttgcttgctataaccagggtaact
ccagcctacagactctcaaggaaacagggccatgaatatgtaatattgtacaggatatat
tttggtgaagtgcaactgagcggcttgggagaaggtttccagacagtccgtgttgggaca
gtgggtactccagtgggcaccatcactttgtcttgtgcctacagaatcaacctcgctttc
atgtcaaccaggcagtttgagaggacccctcctatcatggggattatcattgatcacttt
gtggaccgtccctatcccagctcttcacccatgcatccctgcaattacagagctggtgag
gacaatggtgcagtatacccctcagtggaagattcccaagaagtgtgcaccacgtctttt
tccacctctcctccatctcagtgtgtttttactgtcacaaagacacattttcagacccct
cctcctgtggtgacggacaccttgaaggtcccagtgatgggactggccttttcacatcaa
ctttccagctctcgtctttcctatcagcctgctgccctgggagttggatcagctgacatg
gggtatcctgtactctttgctggtggcttgaacgctgcacaccctcaccagttgattggt
ccaggcaaagaggggggagttcccccaattcctagccagccagcacatggcactcaagct
gaccaagagaggatgtgcaccccactggatggagtccactactcagcagctactccttct
agtagcgaggacacagaaacggtatcaaacagcagtgaagggaagtgtggctccccacat
gaccttttggagaccatctttatccggaaggtgggagcttttgtcaacaaacccattaac
caggtgaccatggccaacttagacattccttttgccatgtttgctcccaagaatgttgag
ctggaagataacgaccccatggtcaatcctcctgattccccagaaaccgaatctcctcta
caaggcagcttacactcggagggctccagtggcagcagcacagggaacacccatgatgac
tttgttatgattgactttaaaccagcattttcaaaagatgacattcttccaatggacctg
gggacgttttaccgtgagtttcagaacccccctcaactcagcagcctctccattgacatt
ggagcacagtccatggcagaggatttggactcgttaccagagaagctggcagtccacgag
aaaaatgtcaaagagttcgatgcctttgtagaaaccttgcagtga
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