Caloenas nicobarica (Nicobar pigeon): 135988941
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Entry
135988941 CDS
T11056
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
cnic04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135988941 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135988941 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135988941 (SNW1)
Spliceosome [BR:
cnic03041
]
Complex B
Other components
Prp19-related factors
135988941 (SNW1)
Complex C
135988941 (SNW1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
135988941
NCBI-ProteinID:
XP_065491406
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Position
5:23112075..23128877
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AA seq
538 aa
AA seq
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MALTSFLPAPTQLSQDQLELEERARAQRSRQTALVSSRREPPPYGYRKGWIPRVLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKIIYSKYTDLV
PKEVMNVDDPELQRPDEETIREITEKTRAALEKSVSQKIAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRPSNEVQYDQRLFNQTKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNVDKDIYGDDLEARIKTNRFVPEKEFSN
SDRNTRGRGRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHDSKKRRKD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaccagttttttacctgctccaacccagctgtctcaagaccagcttgagcta
gaagaaagagcaagagctcaaagatccaggcagactgctctagtctcatcacgaagggaa
cctcccccatacggttaccggaaaggatggataccacgggtgctagaggattttggagat
gggggtgctttcccagaaattcatgtggcccaatatccattggatatgggccgaaagaag
aaaatgtccaatgctttggctgtgcaggtggatgcagaaggaaaaataaagtatgatgca
attgctcgacaaggacaatcaaaggacaagattatttacagcaaatacacagatcttgtg
ccaaaagaggtcatgaatgtggacgatcctgaactgcaaagaccggatgaggagacaatt
agagagataacagagaagacaagagcagccttggagaaatcagtttcccaaaaaattgca
gcagccatgccagttcgagccgctgacaaactagctcctgcacagtacattcggtacaca
ccatcccagcaaggtgttgccttcaactctggagcaaaacagagagttattcggatggtg
gaaatgcagaaggaccctatggagcctccaagattcaaaattaacaagaagattccgcgt
ggaccaccttctcctccagcgcctgtaatgcactctcctagtagaaagatgacggtgaaa
gagcagcaagagtggaaaattcctccatgcatttcaaactggaaaaatgcaaagggttac
accattccattagacaagcgtctggctgcagatggcagaggactacagactgttcatatt
aacgaaaattttgccaagcttgctgaggctctctacatagctgacagaaaggctcgtgag
gctgtagagatgcgtgcccaggtggagaggaagatggctcagaaagaaaaagagaaacat
gaagaaaagctcagagaaatggctcagaaagccagggagagaagagcagggatcaaaacc
catgttgaaaaagaggatggtgaagctagagaaagagatgaaatcagacatgaccggcgc
aaagagagacagcatgacagaaatctttccagggcagcccctgacaaaaggtcaaagctg
cagagaaatgagaacagagatatcagtgaagttattgccctaggggtacccaaccccagg
ccatccaatgaagtccagtatgaccagaggctgttcaaccagaccaagggtatggacagt
ggttttgctggaggagaggatgaaatttataatgtttatgaccaaccttggagaagtggt
aaggatatggcccaaaacatctacaggccaagtaaaaatgtggataaggacatctatggt
gatgatttagaggctcgaataaagaccaacaggtttgttcctgagaaagagttttctaac
tctgatcgtaacaccagggggaggggcagagatggaccagttcaatttgaggaggatcca
tttggtttggacaagtttctggaagaagctaagcaacacggtggttctaaacggccatca
gatagcagccgccctaaagaacatgagcatgattcaaaaaagaggaggaaggactga
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