Caloenas nicobarica (Nicobar pigeon): 135988987
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Entry
135988987 CDS
T11056
Symbol
MLH3
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135988987 (MLH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnic03400
]
135988987 (MLH3)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
135988987 (MLH3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
MutL_C
HATPase_c
Motif
Other DBs
NCBI-GeneID:
135988987
NCBI-ProteinID:
XP_065491499
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Position
5:24532675..24552613
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AA seq
1399 aa
AA seq
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MIKRLAEDVRARLRSGVTINSLGQCVEELVLNSIDAKATCVAIRVDLEAFKIQVVDNGSG
MGREDLNAMGKRYFTSKCSSVGDLENLTFYGFRGEAVASIANMATVVEVSSKTSRTAKTF
VKLFHNGQALEVCEAELSRPSGGTTVTVCNLFYQLPVRRKRMDPVLELERVRHKVEAISL
MHPSVSLSLRNDASSTMVLQLPKTRDIYSRFCQIYGLGRSQKLREINHKSGGFELSGYIS
IEGHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICCKAKSGPVSRQAGASAGRHRC
VPELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKVFLKREHLLVELC
GEDIREFNEENNFCLYKAPVLKPSLSDNKSIQDSFKKACDEIADSYEMCNLQSKDVKRKS
MSGKKSLSLMESNKNLQETEMAPDQKIAEPSDPCRNNQVEIPLPSKDDTASDFVISNISE
EEPKDTNSSQKSSDTHLKPSENLCSSFSGGARSETRKIDSCGDLQHSSENYIKDMESKQG
KVVQKSNTVHILNNDVIHSPSEREDLTETAMGTETVSGSSLMRTGDKEMAEMIDDAGRGA
VSSMPLKSCSTSLITRVMQNQPPRACEQTEMNLALNMQCRPGPVSTQDTFGHKVSFLIQS
LNAKNISSNTSEEYTPLLTREVCMADSSEQLENKTLSNQVSEGITMPIATSKRHYETLNV
TELPQATSCIPHNKIIKSTRRQIALPRPQPPKKLSLSTQLGSLEKFRRYYGRVRCVLQTP
LSEQSEFGLPVFNSQANCGFSKNGNDNHGSVSTSETPALEDTDPSNSIQVFGSLEESSLC
SGEASQDKQALCPSPLTLSDYSQVSKKILRCRRSPGSLSSKLSRLKSDHKEGAQLGEQFQ
TDPSRKEDYCFDLGSSNSDFLYNACQTYQSSVEKMKECNYGISKGDACSQPDGMRAESMK
STVSPSPLSSTEGEYTVSSGSVLLLPAQEDCTNITCEEKSTLGESSEQNLKDTEVPHMTF
PSNLEFSADNKSTGNPRNDSWCSDWLQDFDVSLGKTIYINKATGLSTYSTPPAEAFQAAC
VQDITTMAVNVVTENDAEGESLQSLLSEWDNPVFVPCPEVAVDVTSSQADNLAVKIHNIL
YPYRFTKDMVHSMQVLQQVDNKFIACLINTRDEMDKKADGNLLILVDQHAAHERIRLEQL
IADSYDKEAAACGKKKLLSSAISPPLEIEVTEEQRRFLRCCYKNLEDLGLELSFPETNSS
LILATKVPLCSTERDANELQRKRQPVTKSVIEELIQEQVELVQTTGAGARGTLPLTFLKM
FASQACHGAIKFHEHLTLEESCRLIKALSSCQLPFQCAHGRPSMMPLADIDHLQQEKQPK
PNLARLRKMARAWHLFGKK
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgtttggcggaagatgtgcgagccaggctgcgttctggagtgactatcaac
tccctagggcagtgtgttgaggagcttgtcctcaacagcattgatgccaaagcaacatgt
gttgctattagggtggatttggaagcttttaagatccaggtggtggacaacggctccggg
atggggagagaggacttaaatgcaatgggaaagcggtatttcaccagcaagtgcagctca
gtgggagacttggagaacctgacgttctacggctttagaggggaggctgtggcaagcata
gccaacatggccactgtagtggaagtctcatctaagaccagcaggacagcaaaaacattt
gtgaaactctttcacaatgggcaagcactggaagtctgcgaagctgaattgagcagacca
agtggcggaactacggtgacggtgtgtaatctgttctatcagttaccggtgaggagaaag
cgtatggatcctgtgttggagcttgagagagtgagacataaagtagaggctatttcgctg
atgcatccctctgtttcactttctttaaggaacgatgcttcttctactatggtgcttcag
ctccctaagacaagagatatatattctcggttttgtcaaatttatggactgggtaggtcg
cagaagttacgagaaataaatcataagtctgggggatttgagctaagtggttatatcagc
attgaaggacattacaataagaatatgcagttcttgtatgtgaatagaaggcttgtttta
aagacaagactacacaaactaattgattttttattaagaaaagaaagtgtcatctgctgc
aaggcaaaaagtggccctgtgagcagacaggctggtgcaagtgctggtcgccatcgctgt
gttccagagttgtatgggatctttattctcaatgtgacttgtgcgtacagtgactatgat
gtgtgtctagaacctgcaaaaactctaattgagttccagaactgggatgttcttctaact
tgcatagaggaaggagtgaaagtatttttgaaacgagaacatttacttgttgaactgtgt
ggtgaggacatcagagaatttaatgaagagaataacttttgtttgtataaggctccagtt
ttgaagccctcactctctgacaacaagagcatccaagacagttttaagaaagcatgtgat
gaaattgcagattcttatgaaatgtgcaacttgcaatcaaaagatgtgaaaaggaaatcc
atgtcagggaaaaaatccttgagtcttatggagtcaaataaaaatctacaggaaactgag
atggccccagatcagaagatcgctgaaccatctgatccatgtagaaataaccaagtggag
attccactgcccagcaaagatgacacagcttctgatttcgttatatcaaatatctcagaa
gaggagccaaaagacaccaacagttcccaaaaatcatctgatactcatctgaaaccttca
gaaaatctttgttcctcttttagtggaggggccagatcagaaacaagaaaaatagacagt
tgtggtgacctgcagcattcttcagagaattacataaaagatatggaaagcaagcaaggg
aaagtagtgcagaaaagcaatacggtccatatcttaaacaatgatgttattcattcgcca
tctgagagagaagaccttactgaaacagcaatgggaactgaaactgtctctggaagttca
ttgatgaggacaggagataaggaaatggccgaaatgatagatgatgctggaagaggcgct
gttagttccatgccattaaaatcgtgctctacaagcctcataacacgtgtgatgcaaaat
cagcccccacgtgcatgtgaacaaacagaaatgaatcttgcattaaacatgcagtgtaga
cctggccctgtcagtacccaggatacttttggccacaaagtgagttttctaattcagtct
ttaaatgctaagaatatttccagtaatacaagtgaagaatatacacctcttttgaccaga
gaagtatgcatggctgatagtagtgagcagttagagaacaaaacattgtcaaatcaggtg
agtgaggggataactatgcctattgccaccagtaaaagacattatgagacattgaatgtt
acagaattgccacaggcaacttcttgtattcctcacaataaaattataaaaagcactaga
agacaaatagctctgccaagacctcagccccctaagaagctgagcttgtccacacagctg
ggttcattagaaaagttcaggagatattatggtagagtcaggtgtgtgctacaaacaccg
ttgtcagagcagagtgaatttggtctccccgtttttaattcacaagctaattgtggcttt
tcaaagaatgggaatgacaaccatggtagtgtgagcacttccgaaactccagctttggaa
gatacagatcctagtaatagtatccaggtttttggttctttggaagagtcttcattatgc
agtggagaagcttcacaggacaaacaggccctttgtccaagtccattgacattgtctgat
tactctcaggttagtaaaaaaattctaagatgtagaagatctccaggatcattatcatcc
aaactgtccagactgaaaagtgaccacaaagaaggagcacaacttggtgaacaattccaa
acagacccaagtagaaaagaggactactgttttgatcttggatcttcaaatagtgacttt
ttgtacaatgcttgtcaaacatatcaatcctcagtggaaaaaatgaaggaatgtaattat
ggcatttctaagggggatgcatgctcacaaccagatggaatgagagcagagtccatgaaa
agtactgtcagcccatcaccactcagcagcacagaaggggagtacacggtctcttcaggc
agtgttttactattacctgctcaagaggattgtactaacatcacctgtgaagagaaaagt
acattaggtgaatcctcagaacaaaatctaaaagatactgaggttccccatatgaccttc
ccaagtaacttggagttctctgcagacaacaaaagcacaggcaatcccaggaatgattca
tggtgttcagactggctgcaagattttgatgtttcgttgggtaagacaatatacatcaat
aaagcaactgggctgagcacctacagcactcctcctgctgaggcatttcaagctgcctgc
gttcaagatataacaacaatggctgtgaatgttgtcacagagaatgatgctgaaggagag
tctctccagtcgttgctttcagaatgggataatcctgtttttgttccttgcccagaggtt
gctgttgatgtgaccagcagtcaggctgacaatctggctgtgaaaattcacaatatcttg
tatccttatcgtttcaccaaagacatggttcattcaatgcaggttcttcagcaagtggat
aataaatttatcgcttgtttaatcaacactagggatgaaatggataaaaaggcagatgga
aacctcttgattttggtggaccaacatgcagctcatgaacggatccgcttggagcagctt
attgcagattcctatgacaaggaagctgcagcatgtggcaagaagaaattactgtcctct
gccatctctccccctttggagattgaagttacagaagaacaaaggagatttctacgatgc
tgctacaaaaatttggaggacttgggccttgaattgtcatttcctgagaccaacagctcc
ttgattctagcgacgaaagtgccactgtgttctacagaaagagatgccaatgaattacaa
cggaaaagacaacctgtcactaaaagcgtcattgaggagcttattcaagaacaagttgag
ctagtgcagaccacaggagcaggagcacgagggacactgcctctgacatttctgaagatg
tttgcttcccaggcctgtcatggagctattaagtttcatgaacacttgactttggaggag
agctgcaggcttataaaagctttgtcatcttgccagctgcccttccagtgtgctcacgga
agaccttccatgatgcctcttgcagacatagaccatctacagcaggaaaagcagcctaaa
cctaatttggctagactacggaagatggcacgagcgtggcacctatttggaaaaaaatga
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