Caloenas nicobarica (Nicobar pigeon): 135988998
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Entry
135988998 CDS
T11056
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03013
Nucleocytoplasmic transport
cnic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135988998 (PNN)
03015 mRNA surveillance pathway
135988998 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135988998 (PNN)
03041 Spliceosome [BR:
cnic03041
]
135988998 (PNN)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135988998 (PNN)
Spliceosome [BR:
cnic03041
]
Complex C
Other components
EJC/TREX
135988998 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
135988998
NCBI-ProteinID:
XP_065491521
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All DBs
Position
5:complement(25189141..25199560)
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AA seq
693 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALTGPGGGRGRGSLL
LRHGFSDSGGGPPAKQRDLEGATSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVSTEKQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLMEDSQKKMNAIFESRRNEFAEQINKMEARPRRQSMKEKEQQELQK
EEKKEEQNKEQEEGKAAQQVEELETGNQHNDVEMEEVGEEKGKIGSGHSDAEKEQEEDEQ
KHEMELKVEETTEVRENDKQQGGQHEKVTVTKEESENIQPVDNEQDVAEMNEADSVELLE
NENGKEVEPEAECDVQPEKVCSVPSPKKDKGVKLEIESEPEEKQEKAREAQPDPAAEAVP
QLHSVPLPQSPQLSQSTQDTEPQADKDEDAVVSVKVTEAQTEQSQTLSVEIKNKTRSRSR
GRAGNKTGKSHSRSSSSSSSSSTSSSTTTGTSSSTGSSSSRSSSTSSSTTSGTTSRGSSS
SSSSTSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGNRDTKSSKDKSSR
SDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgcgcgctgcaggagcagctggagaaggccaaggagagcctcaag
cacgtggacgagaacatccgcaagctcacgggccgggaccccaatgacgtgaggccccct
caaaacagactgctagccctcacaggccctggtggaggtagaggccgtgggagcttattg
ctgaggcatggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggggcaaccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gatgcagaggatgatgatattaaaaagccagcattgccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcctgttgatgggcactcttcaaaaatttaagcaggagtcc
acagtttctactgagaagcaaaagagacgacaagaaattgaacaaaaacttgaagtgcag
gcagaggaagaaagaaagcaagttgaaaatgaaaggcgagaactgtttgaagaaagacgt
gctaaacagacagagctgcggttactggagcaaaaggttgagcttgcgcagttgcaagaa
gaatggaatgaacataatgctaaaataattaaatacattagaacgaagacaaaaccccac
ttattctacatacctggcagaatgtgtcctgctacgcaaaagttgatggaagactcacag
aaaaagatgaatgcaatctttgaaagcaggagaaatgaatttgcagagcagattaacaaa
atggaggccaggcccagaagacaatctatgaaggaaaaagaacagcaggagttgcagaaa
gaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggcggctcagcaggtg
gaagagttggagacaggtaatcagcacaatgatgtagaaatggaggaggtaggggaggaa
aagggaaaaataggttcagggcatagtgatgcagagaaagaacaggaagaggatgaacag
aaacatgaaatggagcttaaagtagaagagactaccgaggtgagggagaatgacaagcaa
cagggtggtcagcatgaaaaggtcacagtcacaaaagaggaaagtgaaaacattcagcca
gtggataatgagcaggatgtggctgaaatgaatgaggctgatagtgtagaacttctagaa
aatgaaaatggcaaagaagtggaaccagaagcagagtgtgatgttcagccagaaaaagtg
tgtagtgttccttctcccaagaaggataaaggtgtcaaactagaaattgaatctgaacct
gaagaaaaacaagagaaggcacgtgaagctcagccagatcctgcggctgaggctgtacct
cagctgcactctgtgccactgccacagtcacctcagttgtctcagtccactcaggataca
gagccccaggcagacaaggatgaagatgctgtggtatctgtaaaggtgactgaggcacag
acagaacagagtcagacactgagtgtagaaattaagaataagactaggagtagaagcagg
ggtagggcagggaacaaaactggtaagagtcatagccgtagtagcagcagcagtagtagc
agtagtacttcaagcagtactactactggaactagttccagcactggcagcagtagcagt
cggagtagttccaccagcagcagcactacaagtggaactactagcaggggcagtagcagc
agtagttctagcactagtgaaagcagaagtcgaagccgaggaagagggcataacagagat
agaaaacgcaggaggagcacggacaggaagcgaagggatgcttcaggagtagatagaagt
cacaagtcctcaaaaggtgggaatagagataccaaaagctcaaaggataaaagttcaaga
tctgatagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttcacggagt
gaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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