Caloenas nicobarica (Nicobar pigeon): 135989012
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Entry
135989012 CDS
T11056
Symbol
CD44
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135989012 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135989012 (CD44)
04090 CD molecules [BR:
cnic04090
]
135989012 (CD44)
00535 Proteoglycans [BR:
cnic00535
]
135989012 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
135989012 (CD44)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135989012 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
135989012 (CD44)
Exosomal proteins of colorectal cancer cells
135989012 (CD44)
Exosomal proteins of bladder cancer cells
135989012 (CD44)
CD molecules [BR:
cnic04090
]
Proteins
135989012 (CD44)
Proteoglycans [BR:
cnic00535
]
Cell surface proteoglycans
Others
135989012 (CD44)
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Hyaluronan
Cell surface receptors
135989012 (CD44)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Motif
Other DBs
NCBI-GeneID:
135989012
NCBI-ProteinID:
XP_065491556
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All DBs
Position
5:complement(47851863..47905612)
Genome browser
AA seq
460 aa
AA seq
DB search
MANFFLWATFGLCLLKLCLTETQFNVSCRYGGVFHVEKNGRYSLTRSEAVELCRALNSTL
STLEQLKKAHELGFETCRYGFVVGNIVIPRINPYHLCAANHTGIYKLSANTTGRYDAYCY
NATETRDKACEPIERLDISFLNHQGEIVIDNADGSRYDADGTRHTGESSTSGADDENVGS
GSIHDTTPMDTSIRRSSPSYYASATPVSELPGHSSGGDEKEIPRKDSDDEVSSVSLDISL
VTAADDSPEKDSGQYPASTITESVDDVNQEKATKEPLAPGTPPGSESEQANTTDGAHVNW
IPGVFPDIEDHLDQLQTPLPTRSTSSIYGNQGPHKGHYESTTFPGDTTTTKIVPQSRLSQ
VPEWLIIVAALVALALILAVCIAVNSRRRCGQKKKLVINNGKGAVEDRKTSGLNGGASKS
QEMVHLVHKEQSNDQTGACDEFLTTDETQNHQELDMKSGV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttcttcttatgggcaacttttggattatgtttgctgaagctttgtctaaca
gaaacacaattcaatgtaagttgcagatatggaggagtttttcatgttgagaaaaatggt
cgctatagtctcacacgatctgaagcagttgaactctgcagagctctcaatagtactttg
tcaacactagagcagttgaagaaagctcatgaacttggatttgaaacttgcaggtatggt
tttgtagtggggaatattgttattccacgaatcaatccctatcatctttgtgcagcaaat
catactggcatttataaactttcagcaaacacaactggtcggtatgatgcatactgttac
aatgctacagaaacaagggacaaagcatgtgagccaattgaaagactagatatttctttc
ctcaatcatcagggtgaaatagtcattgacaatgcagatggctcacgttatgatgcagat
ggtacacgtcataccggagagtcctcaacctcaggagcggatgatgaaaacgtaggtagt
gggtcaatacatgacacaactcccatggatacctctatcaggagatccagcccctcatat
tatgcaagtgctactccagtctcagagctgccaggtcattcttctggaggggacgaaaaa
gaaattcctcgaaaagattctgatgatgaagtttcctctgtatcacttgacatctctttg
gtgacggcagctgatgattcccctgaaaaagacagtggacagtatcctgcaagtactatc
acagagtctgtggatgatgttaaccaagagaaagcaactaaggagccactggcacctggc
actccacctggaagtgaaagtgaacaagcaaacaccacagatggtgcccatgtcaactgg
atacctggcgtttttccagacattgaagatcatcttgaccaactgcagacccctcttcct
actagatctacctccagtatatatggtaatcaaggaccacacaagggacattatgaatcc
actacttttcctggagacaccaccacaacaaaaatagttccacaatcaaggttgtcccag
gtaccagaatggctgatcatagttgctgctcttgtggcacttgcattgattcttgcagtg
tgcattgctgttaacagtcgaagaagatgcgggcagaagaaaaagctagtgattaacaac
ggcaaaggggcagtggaagacaggaagacaagtggattaaatggaggtgccagcaaatca
caagaaatggtgcacttggttcataaagaacagtcaaatgaccaaacaggagcatgtgat
gaattcctgaccactgatgaaacacaaaatcatcaggagcttgacatgaagagtggagtg
taa
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